prot_H-paniculata_contig5668.13204.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5668.13204.1
Unique Nameprot_H-paniculata_contig5668.13204.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length251
Homology
BLAST of mRNA_H-paniculata_contig5668.13204.1 vs. uniprot
Match: D7FQ61_ECTSI (Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences pdb|3C5R|B Chain B, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ61_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 1.780e-69
Identity = 135/250 (54.00%), Postives = 167/250 (66.80%), Query Frame = 0
Query:    1 MDNAFTTSFSAMQAEVTKREEFAAADATARAAKVAAACTNVWNASRQGVPLRRLRELMELKMENSRRGAYTNRSEPFEQLCRRVEGFVVESRHPYTKGARQEQEVCIPDAKFFYVVFDAGSNTAAGAGNVSLLQPDDRDPANFYARGAYCGSINNGNEQAARLPGVDGEPPLRVNGSSVCVTFSASYWRGVATAGEDYGWRLVCFTVPENNGATSDDGGVVRDDNAKRAVVEAERAADRAEAVDAFNVLG 250
            ++ AF+++FS++QA  ++++  AA     RA   A+ C+ VW+A+R GVP+R LRE+M  KM  SR     + SEPF+QLCRRVEG VVESRHPY KG RQ+ E  + +A  FYV FDA SN   G G V+L + + RDP  F+ RG Y  +++   E  ARLPGVDGE P+RV GSSV VTFSASYW GVA AGEDYGWRLVCFT  +             DD+AK  V EAERAADRAEAVDA N  G
Sbjct:   10 IEAAFSSAFSSLQARRSEQKAAAACAEGERAELRASVCSTVWSAARYGVPVRTLREMMSEKMFQSRN---FDPSEPFDQLCRRVEGVVVESRHPYPKGVRQDIEAYVANADSFYVAFDAASNATIGMGKVALQEFNARDPKLFFPRGPY--NVDTSGE--ARLPGVDGERPMRVQGSSVLVTFSASYWTGVAPAGEDYGWRLVCFTADD-------------DDHAKALVSEAERAADRAEAVDAVNTHG 239          
BLAST of mRNA_H-paniculata_contig5668.13204.1 vs. uniprot
Match: A0A6H5KVI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI9_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 2.470e-32
Identity = 73/125 (58.40%), Postives = 83/125 (66.40%), Query Frame = 0
Query:  126 GAGNVSLLQPDDRDPANFYARGAYCGSINNGNEQAARLPGVDGEPPLRVNGSSVCVTFSASYWRGVATAGEDYGWRLVCFTVPENNGATSDDGGVVRDDNAKRAVVEAERAADRAEAVDAFNVLG 250
            G G V+L + + RDP  F+ RG Y G  ++     ARLPGVDGE P+RV GSSV VTFSASYW GVA AGEDYGWRLVCFT  +             DD+AK  V EA+RAADRAEAVDA N LG
Sbjct:    2 GMGKVALQEFNARDPKLFFPRGPYNGDTSS----EARLPGVDGERPMRVQGSSVLVTFSASYWTGVAPAGEDYGWRLVCFTADD-------------DDHAKALVSEAKRAADRAEAVDAVNTLG 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5668.13204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ61_ECTSI1.780e-6954.00Chain A, Crystal Structure Of The Bard1 Ankyrin Re... [more]
A0A6H5KVI9_9PHAE2.470e-3258.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5668contigH-paniculata_contig5668:372..2470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5668.13204.1mRNA_H-paniculata_contig5668.13204.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5668 372..2491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5668.13204.1 ID=prot_H-paniculata_contig5668.13204.1|Name=mRNA_H-paniculata_contig5668.13204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp
MDNAFTTSFSAMQAEVTKREEFAAADATARAAKVAAACTNVWNASRQGVP
LRRLRELMELKMENSRRGAYTNRSEPFEQLCRRVEGFVVESRHPYTKGAR
QEQEVCIPDAKFFYVVFDAGSNTAAGAGNVSLLQPDDRDPANFYARGAYC
GSINNGNEQAARLPGVDGEPPLRVNGSSVCVTFSASYWRGVATAGEDYGW
RLVCFTVPENNGATSDDGGVVRDDNAKRAVVEAERAADRAEAVDAFNVLG
*
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