mRNA_H-paniculata_contig5667.13203.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: D8LNX2_ECTSI (Protein phosphatase 2C containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX2_ECTSI) HSP 1 Score: 459 bits (1182), Expect = 3.980e-162 Identity = 227/262 (86.64%), Postives = 243/262 (92.75%), Query Frame = 1
Query: 1 MKEQFSGGAVRLFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCPVDCSSSGATLVLTIIRGGKITVANLGDSKCVLARLVNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDVTEIGHAVQIVQGYAARSRGNAWDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKL 786
MKE G VRLFVVLDGHGELGHLVSRRC+ LP V+DS L VARAT RMADDLR+CPVDC+SSGAT VLT IR GKI+VANLGDSKCVLARLVNGQ+CAVPLS DHKPDRPDERQRILA+GGQVGSRHLVVGS+PSGPIRIPMGPARVWYRC+GEIMGLAMSRSLGDDIAH+AGVSSEPEV EH+IDANDQFLILATDGVWDVTEIG AVQIVQGYA+R RGN+WDPQGAASLLAH+ARKRWEGLSAVVDDITA+VV+L
Sbjct: 18 MKEDLGGLGVRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 279
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A835YTT3_9STRA (Phosphatase 2C-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT3_9STRA) HSP 1 Score: 295 bits (754), Expect = 5.370e-96 Identity = 160/279 (57.35%), Postives = 192/279 (68.82%), Query Frame = 1
Query: 19 GGAVRLFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRT-CPVDCSSSGAT-LVLTIIRGGKITVANLGDSKCVLARLVNG-------------------QLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEH--EIDANDQFLILATDGVWDVTEIGHAVQIVQGYAARSRGNAWDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKL 786
G +R+F VLDGHGE GHLV+RRC E LP + + ARA + +DL + VDC SGAT +V+TI G +TVANLGDS+CVL R G Q+CAVPL+ DHKPDRPDER RI A GGQVGSR L+VGS P+GPIRIPMGPARVWY+ +GE MGLAMSRS+GD IAH AGVS++PEV+EH + DA D FL+LA+DGVWDV + AV IV AA + G WDP+ AA ARKRW+GLS ++DDITA+VVKL
Sbjct: 77 GDRLRVFAVLDGHGEAGHLVTRRCRERLPQLLRAARGDAARACVALHEDLASGVHVDCQCSGATCVVVTISARGAVTVANLGDSRCVLGRWECGGXXXXXXXXXXXMVGRAQRQVCAVPLTTDHKPDRPDERARIQAAGGQVGSRQLIVGSGPAGPIRIPMGPARVWYQVRGETMGLAMSRSIGDVIAHAAGVSAQPEVVEHCLDRDAGDAFLVLASDGVWDVLDAQAAVHIVAACAAAAGGAEWDPREAAXXXXXAARKRWDGLSPMIDDITALVVKL 355
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A7S4D964_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D964_HETAK) HSP 1 Score: 283 bits (724), Expect = 4.420e-92 Identity = 139/252 (55.16%), Postives = 182/252 (72.22%), Query Frame = 1
Query: 34 LFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDL-RTCPVDCSSSGATLVLTIIRGGKITVANLGDSKCVLARLVNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDVTEIGHAVQIVQGYAARSRGNAWDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKL 786
+F VLDGHG+ GHLVS +C E LP ++ ++R M +L ++ +D SGAT V+ ++ G ++TV NLGDSK VL R VNG PL+ DHKPDRPDERQRIL GG+VG R LVVG+ P+GP+R+PMGP R+WY+ +GE MGLAMSRSLGD I H GVS++PE+ EH +D D FL+L +DG+WDVT++ AVQIVQG ++ + WDP+ AA LA +AR+RWE +S +VDDITA+VVKL
Sbjct: 59 MFCVLDGHGQQGHLVSTQCRERLPQLYRETGNDLSRTCLAMQAELEKSTAMDVKCSGATCVICVVEGRRLTVGNLGDSKAVLGRRVNGVTLPHPLTNDHKPDRPDERQRILQAGGKVGCRQLVVGNGPNGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDGIVHALGVSADPELTEHLLDGEDLFLLLGSDGIWDVTDLNQAVQIVQGVVNKNP-HGWDPREAAEELAVSARRRWESMSQMVDDITAIVVKL 309
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A7S2WTT9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT9_9STRA) HSP 1 Score: 270 bits (689), Expect = 3.910e-85 Identity = 141/264 (53.41%), Postives = 178/264 (67.42%), Query Frame = 1
Query: 10 QFSGGAVRLFV--VLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCPVDCSSSGATLVLTIIRGGKITVANLGDSKCVLARLVNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDVTEIGHAVQIVQGYAARSRGNA---WDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKL 786
+ SGG L V DGHGE GHLVSR E L ++ + + +RA +M +L VD SGAT V+ ++RG I V N GDS+ VL R NG + A+ L+ DHKPDRPDER+R++ GGQVGSR LVVG + +GP+ +P+GP RVWY+ +GE MGLAMSRSLGD IAH GVSSEPEV EH + + D F+ILA+DG+WDV E AVQIV + AR+ + WD AA +L TAR+RWE LS +VDDITA+VV L
Sbjct: 168 EHSGGESDLHAWGVFDGHGEFGHLVSRIIRERLGKIWLECSQNFSRAFWQMQSELDKSSVDARCSGATCVMVVLRGNTIQVGNCGDSRAVLGRRSNGTISALQLTSDHKPDRPDERRRVMQAGGQVGSRQLVVGHNANGPVTLPLGPPRVWYQIRGETMGLAMSRSLGDGIAHSNGVSSEPEVTEHAVSSTDVFVILASDGIWDVIETNQAVQIVGNHFARATASGSTQWDVVDAAMVLTTTARRRWESLSPMVDDITAVVVDL 431
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A7S1U9X7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9X7_9STRA) HSP 1 Score: 264 bits (675), Expect = 3.460e-81 Identity = 140/284 (49.30%), Postives = 177/284 (62.32%), Query Frame = 1
Query: 34 LFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCPVDCSSSGATLVLTII------RGGKIT--VANLGDSKCVLARLVNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDVTEIGHAVQIVQGYAARSRGNA-------------------------WDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKL 786
LF V DGHGE GHLVSR+C E +P ++ + L + A D ++C VDCS SGAT V+ II RGG T + N GDS+ V+AR+VN + V L++DHKPDRPDER+RI A+GG+VG+R +VVG P+G I +P+GPAR+WY C+GE MGLAMSRSLGD IAH+ G S EPE+ + D FL+LATDGVWDV + AV I +R A WDP+ AA + TAR+RWE LSA+VDDIT +VVKL
Sbjct: 316 LFAVFDGHGEFGHLVSRKCREEMPQRLISNRLDMGAAFDEAQDHFKSCEVDCSCSGATAVVIIIDNATRGRGGSSTLRIGNCGDSRAVVARVVNNTITGVTLTKDHKPDRPDERRRITAMGGKVGTRQVVVGHGPNGAITMPVGPARIWYNCRGETMGLAMSRSLGDLIAHRVGGSHEPEMTMRNLQEEDMFLLLATDGVWDVLDANAAVDIAFEVMMEAREEAGLGPKRVPMGGAAAGFSSEEWRSIPWDPEVAAKRICTTARRRWENLSAMVDDITCVVVKL 599
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A482S1K4_9ARCH (Protein serine/threonine phosphatase 2C family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1K4_9ARCH) HSP 1 Score: 258 bits (660), Expect = 9.210e-81 Identity = 128/256 (50.00%), Postives = 176/256 (68.75%), Query Frame = 1
Query: 28 VRLFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCPVDCSSSGATLVLTIIRGGKITVANLGDSKCVLARL-VNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDVTEIGHAVQIVQGYAARSRGNAWDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKLNQ 792
+R++ VLDGHGE GH+VS+RC E P + + V A + M +DL + +D SGAT V+ + ++TV N GDS+ VL R +G + A PLS DHKPD+P+ER+RIL GG +G R ++V GP+ +P+GP RVWY+ +GE +GLAMSRSLGD I HK GV++EPE+ EH+ID +D+F+ILATDGVWDV + HAVQ+V G A+RS W A++ + AR RWE LS +VDDIT +VVK+++
Sbjct: 183 LRVYCVLDGHGEHGHIVSKRCRENFPHFLKSTNWQVEAAFNMMQNDLTSSEIDVRCSGATCVIACVSNNRLTVYNCGDSRAVLGRRSASGAIAAYPLSNDHKPDKPEERKRILGCGGHLGCRQVLVNQGNRGPVSMPVGPCRVWYQHRGETLGLAMSRSLGDSIVHKVGVTAEPELTEHQIDDHDEFIILATDGVWDVVDNNHAVQMVFGVASRSVN--WSVLEASNAVCRFARSRWEKLSPMVDDITCVVVKIHR 436
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A7S3ZZR6_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZR6_9STRA) HSP 1 Score: 256 bits (655), Expect = 5.190e-80 Identity = 133/258 (51.55%), Postives = 171/258 (66.28%), Query Frame = 1
Query: 31 RLFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCPVDCSSSGATLVLTIIRGGKITVANLGDSKCVLARLVNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYR---CQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDVTEIGHAVQIVQGYAARSRGNAWDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKLNQS 795
R + VLDGHGE+GHLVS+RC++ L + S L ++ A M +DL C +D SGAT V + + VAN+GDS+ VL L +CA PL+ DHKPDR DE+ RI+A GGQV R LVVG S +GPI +P+GP RVWYR G+ MGLAMSRS GD IAH GVS EPE+ ++ +D D+FLI ATDGVWDV + AV+IV + R N WDP AA L +AR RW+ LS ++DDITA+VV L+++
Sbjct: 158 RCYGVLDGHGEIGHLVSKRCSQQLCEHFVKSQLDMSLAFRLMQEDLSQCELDIKCSGATCVFVHLHDSYLRVANIGDSRGVLGHLDGANICATPLTSDHKPDRHDEQIRIVACGGQVSCRQLVVGHSSNGPITLPLGPPRVWYRRNSSHGDTMGLAMSRSFGDAIAHGLGVSCEPEITQYNLDLADKFLICATDGVWDVIDNAQAVKIV--HTLYERSNDWDPLEAAHTLCISARNRWQSLSPMIDDITALVVDLHRA 413
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A7S2CMF9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMF9_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.910e-71 Identity = 123/256 (48.05%), Postives = 167/256 (65.23%), Query Frame = 1
Query: 37 FVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCPVDCSSSGATLVLTIIRGGKITVANLGDSKCVLARLVNG--QLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDVTEIGHAVQIVQGY---AARSRGNAWDPQGAASLLAHTARKRWEGLSAVVDDITAMVVKLN 789
++V DGHG+ GHLVS+ E + +D+ + M L VD SSG+T V+ ++ + VAN GDS+ VL ++VN QL + L++DHKPDRPDER R+ GGQVG R +++ S +R+P+GPARVWY +GE GLAMSRSLGD I H GVS EPEV + +D ++F+I+ATDG+WDV H VQIV + AARS + W+PQ AA +L TAR+RWEG+S +VDDITA+V+ L+
Sbjct: 202 WIVFDGHGDRGHLVSKFGREKMGKTWIDNKFRLRETFLSMQQQLNKSSVDVRSSGSTCVMVVLDNDCLKVANCGDSRAVLGKVVNSSSQLATIVLTDDHKPDRPDERMRVEKAGGQVGCRQMLMNRGSS--VRVPLGPARVWYTNRGETTGLAMSRSLGDAIVHTFGVSEEPEVTQRTLDKTERFIIVATDGIWDVLHSSHVVQIVDKHFNEAARSN-SPWNPQDAAMVLCLTARRRWEGMSTMVDDITAVVIDLS 454
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A7S2XVV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV9_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.070e-65 Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 1
Query: 1 MKEQFSG-GAVRLFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCP-VDCSSSGATLVLTIIRGGKITVANLGDSKCVLARLVNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEI 567
++E+ G G + VLDGHG+ GHLVS E L + V+RA RM +DL T P +D SGAT V+ I+RG + V NLGDS+CVLAR VNG L V LS DHKPDRPDERQRILA GG+VG R LVVG+ PSGP+R+PMGP R+WY+ +GE MGLAMSRSLGD I H GVS++PE+ EH++
Sbjct: 103 LEERCGGSGDEGFYCVLDGHGQQGHLVSGYIRENLVRHYSECGQDVSRACLRMQEDLDTTPTLDTKCSGATCVIAILRGRSLLVGNLGDSRCVLARRVNGVLSPVALSNDHKPDRPDERQRILAAGGKVGCRQLVVGNGPSGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDSIVHTQGVSADPELKEHQV 293
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Match: A0A7S2NWU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWU1_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.950e-54 Identity = 103/262 (39.31%), Postives = 152/262 (58.02%), Query Frame = 1
Query: 22 GAVRLFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHRMADDLRTCPVDCSSSGATLVLTIIRGGK-ITVANLGDSKCV-LARLVNGQLCAVPLSEDHKPDRPDERQRILAVGGQVGSRHLVVGSSPSGPIRIPMGPARVWYRCQGEIMGLAMSRSLGDDIAHKAGVSSEPEVMEHEIDANDQFLILATDGVWDV---TEIGHAVQI-VQGYAARSRGNAWDPQGAASLLAHTARKRWEGLSAV-VDDITAMVVKL 786
G+ +++V DGHG GH+VS+ C +LP + ++ RA + DL + +D SG T V I++ + I V N+GDS+ + L R N L A+PLS DHKP + DER+RIL GG++ S+H G P+RVW+ MGLAMSRS+GD+ AH+ GVS EP++ H+I+ D ++LA+DG+WDV E+ H +Q + G A W+ + AA L AR RWE +S +DD+T +V+K+
Sbjct: 119 GSPSVYMVFDGHGRFGHVVSKHCKAVLPKILAETGYDQERAISVLQSDLESSAIDIECSGCTCVTAIVKQNRTIEVGNVGDSRAIILQRSPNNTLKALPLSIDHKPSQLDERKRILETGGRIASKHCSAG------------PSRVWFEYNNTTMGLAMSRSVGDEFAHRVGVSHEPQIFHHKIEPQDTCIVLASDGLWDVYSNDEVAHLIQTCINGNYAD-----WNAKIAAVFLTKMARMRWEHISTEHIDDVTCLVIKI 363 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5667.13203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5667.13203.1 >prot_H-paniculata_contig5667.13203.1 ID=prot_H-paniculata_contig5667.13203.1|Name=mRNA_H-paniculata_contig5667.13203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp MKEQFSGGAVRLFVVLDGHGELGHLVSRRCAELLPTAVMDSALSVARATHback to top mRNA from alignment at H-paniculata_contig5667:7747..11401+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5667.13203.1 ID=mRNA_H-paniculata_contig5667.13203.1|Name=mRNA_H-paniculata_contig5667.13203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3655bp|location=Sequence derived from alignment at H-paniculata_contig5667:7747..11401+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5667:7747..11401+ >mRNA_H-paniculata_contig5667.13203.1 ID=mRNA_H-paniculata_contig5667.13203.1|Name=mRNA_H-paniculata_contig5667.13203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at H-paniculata_contig5667:7747..11401+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |