prot_H-paniculata_contig5666.13202.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5666.13202.1
Unique Nameprot_H-paniculata_contig5666.13202.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1476
Homology
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 3.310e-32
Identity = 77/145 (53.10%), Postives = 93/145 (64.14%), Query Frame = 0
Query: 1338 VFRESMRHLPLACQHGGVDPTSVSRLKLVTRRVYEGLLGEEGMPPPDWHLAATNFRCEQCVKNHIGQKESNVAASILSGELVTELEKPEPVWP---------TKPAAGEEGGSGSGSVVEAEATPFVISRKWVADFKAYHDQVKR 1473
            VF E + ++PL C HGG+ P SVS+ KLVTR  YEG+L    MP PD+HL+A+N+ C  CVK+HIGQKESNV  S  SG+L+ ELEKPEP WP         T+ A G     GSG+   +   PF ISRKWVAD K  HDQ  R
Sbjct: 1353 VFTERLTNVPLLCPHGGLHPASVSKFKLVTRAAYEGILSTVCMPRPDYHLSASNYYCSLCVKDHIGQKESNVNVSRESGQLLAELEKPEPSWPPPQQXXXEGTRAARGRXXXRGSGA---SPQVPFAISRKWVADLKVCHDQFLR 1494          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: A0A6H5L6A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A7_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 5.020e-29
Identity = 72/142 (50.70%), Postives = 85/142 (59.86%), Query Frame = 0
Query: 1338 VFRESMRHLPLACQHGGVDPTSVSRLKLVTRRVYEGLLGEEGMPPPDWHLAATNFRCEQCVKNHIGQKESNVAASILSGELVTELEKPEPVWPTKPAAGEEGGSGSGSVVE------AEATPFVISRKWVADFKAYHDQVKR 1473
            VF + + +LPL C HGG+ P SVS+ KLVTR  YEG+L    MP PD+HL+A+N+ C  CVK+HIGQKESNV  S  SGEL+ ELEKPEP WP                        +   PF ISRKWVAD K  HDQ  R
Sbjct:  864 VFTKRLSNLPLLCPHGGLHPASVSKFKLVTRAAYEGILSTVCMPLPDYHLSASNYYCSLCVKDHIGQKESNVNVSRESGELLAELEKPEPSWPPPXXXXXXXXXXXXXXXXXXXXGASPQVPFAISRKWVADLKVCHDQFLR 1005          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: A0A0D0B355_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus luxurians FD-317 M1 TaxID=944289 RepID=A0A0D0B355_9AGAR)

HSP 1 Score: 119 bits (298), Expect = 2.810e-23
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    1 QYLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVE 123
            QY CEQC+  +DAVRY ELR+LPPVL I  LR+VYD +T  RKK K+ I     L+M   L      +  A ++GA  +VYEL  +L HKGSS + GHY A+V D   + W  F+DE+VT ++
Sbjct:  323 QYFCEQCNSLQDAVRYTELRKLPPVLHISLLRFVYDLKTMERKKSKSMIMFPKVLNMNRFLGSSAERKASALSSGAPSNVYELRGILLHKGSSAYHGHYEAQVFDAGADAWYQFNDEEVTRID 445          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: E9HU41_DAPPU (USP domain-containing protein n=2 Tax=Daphnia pulex TaxID=6669 RepID=E9HU41_DAPPU)

HSP 1 Score: 111 bits (278), Expect = 1.380e-22
Identity = 52/126 (41.27%), Postives = 75/126 (59.52%), Query Frame = 0
Query:    1 QYLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVEGVN 126
            QY CE CS K++A R I LR LP +L+IQ LR+V+D +TG++KK+ + +     ++M   +  QG               Y+L  VL H+G S +SGHY+A ++DP T TW  F+DE V  +EG N
Sbjct:  138 QYFCENCSSKQNATRSIRLRHLPAMLNIQLLRFVFDRKTGLKKKVSSMVHFPFVVEMSNYVETQG--------VAPSSLTYDLSAVLIHRGPSAYSGHYIAHIKDPVTGTWYKFNDEVVQKIEGTN 255          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: E9HU33_DAPPU (USP domain-containing protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9HU33_DAPPU)

HSP 1 Score: 111 bits (278), Expect = 2.200e-22
Identity = 52/126 (41.27%), Postives = 75/126 (59.52%), Query Frame = 0
Query:    1 QYLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVEGVN 126
            QY CE CS K++A R I LR LP +L+IQ LR+V+D +TG++KK+ + +     ++M   +  QG               Y+L  VL H+G S +SGHY+A ++DP T TW  F+DE V  +EG N
Sbjct:  141 QYFCENCSSKQNATRSIRLRHLPAMLNIQLLRFVFDRKTGLKKKVSSMVHFPFVVEMSNYVETQG--------VAPSSLTYDLSAVLIHRGPSAYSGHYIAHIKDPVTGTWYKFNDEVVQKIEGTN 258          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: E9HIU7_DAPPU (Ubiquitinyl hydrolase 1 n=3 Tax=Daphnia TaxID=6668 RepID=E9HIU7_DAPPU)

HSP 1 Score: 114 bits (284), Expect = 1.260e-21
Identity = 53/126 (42.06%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 QYLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVEGVN 126
            QY CE CS K++A R I LR LP +L+IQ LR+V+D +TG++KK+ + +     ++M   ++ QG E             Y+L  VL H+G S +SGHY+A ++DP T TW  F+DE V  +EG N
Sbjct:  268 QYFCENCSSKQNATRSIRLRHLPAMLNIQLLRFVFDRKTGLKKKVSSMVHFPFVVEMSNYVKTQGEEPSSL--------TYDLSAVLIHRGPSAYSGHYIAHIKDPVTGTWYKFNDEVVQKIEGTN 385          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: UPI0013900F62 (ubiquitin carboxyl-terminal hydrolase 48-like n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013900F62)

HSP 1 Score: 114 bits (284), Expect = 1.370e-21
Identity = 56/123 (45.53%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    1 QYLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVE 123
            QY C QC  K+DA RYIEL+ LPPVL++Q LR+V+D +TG +KK+ + +     LDM   LR +          G   +VYEL  VL H GSS +SGHYVA +RD +T +W  F+DE    ++
Sbjct:  326 QYFCTQCQSKQDARRYIELKHLPPVLNLQLLRFVFDRKTGYKKKLHSFVQFPDELDMSNILRDK--------YQGDLSTVYELSAVLMHHGSSAYSGHYVAHIRDNKTKSWYKFNDEDTEKMQ 440          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: A0A162DBE7_9CRUS (Ubiquitinyl hydrolase 1 n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A162DBE7_9CRUS)

HSP 1 Score: 113 bits (283), Expect = 1.700e-21
Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    1 QYLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVEGVN 126
            QY CE CS K++A R I LR LP +L+IQ LR+V+D +TG++KK+ + +    ++DM   ++ QG  +            YEL  VL H+G S +SGHY+A ++DP + TW  F+DE V  +EG N
Sbjct:  271 QYFCENCSSKQNATRSIRLRHLPAMLNIQLLRFVFDRKTGLKKKVSSTVHFPFSIDMSNYVKTQGVVQSN--------QNYELSAVLIHRGPSAYSGHYIAHIKDPISGTWYKFNDEVVQKIEGTN 388          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: A0A8B9J652_ASTMX (Ubiquitin specific peptidase 48 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9J652_ASTMX)

HSP 1 Score: 110 bits (276), Expect = 2.690e-21
Identity = 54/123 (43.90%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    2 YLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVEG 124
            Y CE C  K+ A R I+L  LPP L++Q +R+V+D ++G +KK+   IS    LDM P L            A  E+  YEL  VL H+G S +SGHY+A VRD RTN W  F+DE++  +EG
Sbjct:  263 YYCESCQSKQSATRRIKLHSLPPTLNLQLMRFVFDRQSGHKKKLNTFISFPEVLDMSPFLE-----------AKDEKCTYELSAVLIHRGVSAYSGHYIAHVRDARTNDWYKFNDEEIEKMEG 374          
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Match: UPI0007401870 (ubiquitin carboxyl-terminal hydrolase 48 isoform X3 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI0007401870)

HSP 1 Score: 112 bits (279), Expect = 3.540e-21
Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0
Query:    2 YLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPISLAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYVAEVRDPRTNTWTLFDDEKVTPVEG 124
            Y CE C  K++A R I+L+ LP  L++Q +R+V+D +TG +KK+   IS   TLDMGP L     E  +       + VYEL  VL H+G S +SGHY+A VRD RTN W  F+DE++  +EG
Sbjct:  263 YFCESCQSKQNATRRIKLQSLPRTLNLQLMRFVFDRQTGHKKKLNTFISFPETLDMGPFL-----ERNDV------KCVYELTAVLIHRGVSAYSGHYIAHVRDTRTNDWYKFNDEEIEKMEG 374          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5666.13202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKX6_ECTSI3.310e-3253.10Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
A0A6H5L6A7_9PHAE5.020e-2950.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D0B355_9AGAR2.810e-2347.97Uncharacterized protein n=1 Tax=Gymnopus luxurians... [more]
E9HU41_DAPPU1.380e-2241.27USP domain-containing protein n=2 Tax=Daphnia pule... [more]
E9HU33_DAPPU2.200e-2241.27USP domain-containing protein n=1 Tax=Daphnia pule... [more]
E9HIU7_DAPPU1.260e-2142.06Ubiquitinyl hydrolase 1 n=3 Tax=Daphnia TaxID=6668... [more]
UPI0013900F621.370e-2145.53ubiquitin carboxyl-terminal hydrolase 48-like n=1 ... [more]
A0A162DBE7_9CRUS1.700e-2142.06Ubiquitinyl hydrolase 1 n=2 Tax=Daphnia magna TaxI... [more]
A0A8B9J652_ASTMX2.690e-2143.90Ubiquitin specific peptidase 48 n=1 Tax=Astyanax m... [more]
UPI00074018703.540e-2145.53ubiquitin carboxyl-terminal hydrolase 48 isoform X... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..265
NoneNo IPR availableCOILSCoilCoilcoord: 631..651
NoneNo IPR availableGENE3D3.90.70.10coord: 1..136
e-value: 1.4E-28
score: 102.2
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 2..125
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 18..123
e-value: 1.8E-15
score: 57.2
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 81..99
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..137
score: 20.491
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 1..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5666contigH-paniculata_contig5666:248..12557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5666.13202.1mRNA_H-paniculata_contig5666.13202.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5666 248..12557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5666.13202.1 ID=prot_H-paniculata_contig5666.13202.1|Name=mRNA_H-paniculata_contig5666.13202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1476bp
QYLCEQCSQKRDAVRYIELRRLPPVLSIQFLRYVYDFRTGIRKKIKAPIS
LAPTLDMGPRLRPQGGEEGEACAAGAEESVYELGCVLYHKGSSVHSGHYV
AEVRDPRTNTWTLFDDEKVTPVEGVNSRGSDTGANGGDAGASGEGSTKVK
GKEKAKGARLKKRGRPRGREATVAATESDSDASKRNETKQKNNPTEHTLH
PQPPTPTPNQGEVSDEDPSASDADGGDESSSSSCPSSVAAEDQVQQGQQQ
REQRAEEGAEEEEEEEFKDDTAAKDNGKSRGKRNVRSLAGGGEGGGRGGA
RGKTGAKGAEGQRNGKRRRINRVVEPVSADDEVNAEASTSVTVATTNTTS
AARGSGTSNRARGSTVANTSLFAAKKEEQRPRDSGFGGSGGKGDQKSRKS
GPKRSNGRVRGRAKRDGNGDDHHDGNGDSNGKNNDDDDYDDEENQGGGGG
GGGCSETMMLVSDDDDKGGSDKEEKKEERGGKDGRGRGGGKGSRGGGSRS
RGGSGVAEKSGTTSSNSSDVKSEGKGEGDDEAVFDSADVTDKAEGGGRGR
GSSNHGGDSDDDDDEEEEEDNDEVVSLGNGSSGGGANRGKGSEDAYMLIY
VRKGYRWGAASGGEDEPVLPAHIQAAVDASNAALALEVSRFEQQKRVLEA
DMQARRTRYATLFGRPPNFTSSGERKGETVRKAIDSDGKSGSGSAASPDA
EGAGRRAAVVGRRGGGGGAGRDDVASRVRRSAGDPSTMDLDDDEVVAAVA
GAKAAVEGRGGASGEGKERPPATTTTTAGSRVRDRPVVHPGPTDEQLRNA
AASAIHTEDGYDEVIDDAASIAAAKLEFEIGSKEAQETRDLNHALAESLA
TTTTINGSIITPTSGLSSVSAACRGIGAGGGSSSGDSASQRKKKRMTAAT
TVMLLNDGAEKQQQQDSKGCSWAGGGGDDARNGMQSAVNSAGLTRASPRR
GEEEGEQEEVPQAEQSLLESEFFWVDSHWLRQWVVGEHLPDLPSDTTSID
LASSGVSVETGSSSCGATAKDACLGKGTCSTDPLVLGVDGAVACDARQCQ
PPLPPPPSPSPPANHPCPPPPLQEQQQQQAAPAVTARCLEGGEGRSGGGG
GGVVETVTDNRKRKANGNAAGVEAAEEAKNDQQIPESASTLKTEREAPKE
AIRGGSGAAVAATLSPNVKGEEETGQAQRRGGKRLSPSRENETAARTTPL
PPPPRGPSRRDRAVIGGTEQGKVVGGGLRNGMGRARQMPPPKGKVENDAS
GSDEWYADALSEPAGIENASPKRAAKGVGVTITGETSGENLIAAGGESSE
SVPETGPRNFAGKRPRDSRAFAGAVSVSATSVVRRDGVFRESMRHLPLAC
QHGGVDPTSVSRLKLVTRRVYEGLLGEEGMPPPDWHLAATNFRCEQCVKN
HIGQKESNVAASILSGELVTELEKPEPVWPTKPAAGEEGGSGSGSVVEAE
ATPFVISRKWVADFKAYHDQVKRKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf