prot_H-paniculata_contig5663.13199.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5663.13199.1
Unique Nameprot_H-paniculata_contig5663.13199.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length63
Homology
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BLAST of mRNA_H-paniculata_contig5663.13199.1 vs. uniprot
Match: A0A2W5T1I0_9DELT (Uncharacterized protein n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A2W5T1I0_9DELT)

HSP 1 Score: 52.8 bits (125), Expect = 1.310e-6
Identity = 26/53 (49.06%), Postives = 43/53 (81.13%), Query Frame = 0 
Query:    3 SFAAAVLGGSGQVGGCVIRSLLSEPRCSSVLLLNRRHLQQYDGEARVKQVVVN 55
            SF A V+GG+GQVGG +IR+L++EP C  V+++NR+ ++Q   +A+V+QVV++
Sbjct:    2 SFRAIVIGGTGQVGGALIRALVAEPTCVEVVMVNRKAMKQ-SVDAKVRQVVMD 53
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BLAST of mRNA_H-paniculata_contig5663.13199.1 vs. uniprot
Match: UPI001AED5846 (hypothetical protein n=1 Tax=Bradyrhizobium elkanii TaxID=29448 RepID=UPI001AED5846)

HSP 1 Score: 49.7 bits (117), Expect = 2.750e-6
Identity = 23/53 (43.40%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:    3 SFAAAVLGGSGQVGGCVIRSLLSEPRCSSVLLLNRRHLQQYDGEARVKQVVVN 55
            +F   ++GG+GQVGG V+R+L +EP C+ V+++NRR +     + RV+QVV++
Sbjct:    2 AFRVLIIGGTGQVGGAVVRALAAEPSCAEVVMINRRAISP-GADPRVRQVVLD 53
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5663.13199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2W5T1I0_9DELT1.310e-649.06Uncharacterized protein n=1 Tax=Archangium gephyra... [more]
UPI001AED58462.750e-643.40hypothetical protein n=1 Tax=Bradyrhizobium elkani... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..63
e-value: 2.2E-9
score: 38.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..63
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 5..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5663contigH-paniculata_contig5663:4838..5026 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5663.13199.1mRNA_H-paniculata_contig5663.13199.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5663 4838..5026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5663.13199.1 ID=prot_H-paniculata_contig5663.13199.1|Name=mRNA_H-paniculata_contig5663.13199.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp
MTSFAAAVLGGSGQVGGCVIRSLLSEPRCSSVLLLNRRHLQQYDGEARVK
QVVVNMDNLESEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf