mRNA_H-paniculata_contig5663.13198.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.570e-36 Identity = 67/132 (50.76%), Postives = 91/132 (68.94%), Query Frame = 3
Query: 129 DGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGSGATL 521
+G +G +L++DN YHE L+ PSK ++++T +S+ LESV+KDVECFF +LKGRFRIL+L + Y ++E +DN+F CCILHNMLH DGLDV +E+ DW G G HD +P TD+ VGS L
Sbjct: 74 NGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVL 205
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5L135_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L135_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.740e-36 Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 3
Query: 198 LMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVFA-CCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGSGATL 521
L+ PSK N E+T +S+TLESV+KDVECFFD+LKGRFRIL+L + YR KE +DN+F+ CCILHNMLH DG+DV EED DW G G HDP +P TD +GS L
Sbjct: 15 LIAPSKYPANSEDTAFSRTLESVRKDVECFFDILKGRFRILKLRLGYRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKL 123
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 137 bits (344), Expect = 1.820e-36 Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = 3
Query: 111 IQTLHEDGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGS 509
++DG KG Y+LVDNGYH+ +L+ PSK L++ + +SK LESV+KDVECFF +LKGR RIL L + ++ +E++DNVF CCILHNMLH DG+D L E+ +W G V EPE D G VG+
Sbjct: 111 FDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGT 244
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.170e-35 Identity = 70/140 (50.00%), Postives = 95/140 (67.86%), Query Frame = 3
Query: 117 TLHE-DGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGSGATLAAT 530
T++E DG + KG YLLVDNGYH+ L+PPSK ++ + +SK LESV+KDVECFF ++KG FRIL+L I Y ++E +DNVF CCILHNMLH++D +EE+ +WAG G H+ P D VG+ + A+T
Sbjct: 69 TVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSAST 208
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 134 bits (337), Expect = 4.560e-35 Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 3
Query: 111 IQTLHEDGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGS 509
+EDG KG Y L DNGYH+ +L+ PSK L++++ +SK LESV+KDVECFF +LKGRFRIL+L + Y+ +E++DNVF CCILHNMLH DG+D L E+ +W G EPE D G G+
Sbjct: 156 FDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGT 289
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5JMK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK5_9PHAE) HSP 1 Score: 130 bits (328), Expect = 8.600e-35 Identity = 65/109 (59.63%), Postives = 79/109 (72.48%), Query Frame = 3
Query: 198 LMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVFA-CCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGSGATL 521
L+ PSK N E+T +S+TLESV+KDVECFF +LKGRFRIL+L + YR KE +DN+F+ CCILHNMLH DG+DV EED DW G G HDP +P TD +GS L
Sbjct: 5 LIAPSKYPANSEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKL 113
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.150e-34 Identity = 71/140 (50.71%), Postives = 96/140 (68.57%), Query Frame = 3
Query: 117 TLHE-DGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGSGATLAAT 530
T++E DG + KG YLLVDNGYH+ L+PPSK ++ + +SK LESV+KDVECFF ++KGRFRIL+L I Y ++E +DNVF CCILHNMLH++D +EE+ +WAG G H+ P D VG+ + A+T
Sbjct: 310 TVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSAST 449
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.850e-34 Identity = 64/125 (51.20%), Postives = 87/125 (69.60%), Query Frame = 3
Query: 120 LHEDGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETD 491
L EDG E +G+YL+VD GYH+ + P + +E + K LESV+KD+ECFF +LKGRFRIL++P+LYR K+D +F CC LHNMLH++DGL +LE+D +WAG +G DP V PE +
Sbjct: 284 LGEDGSEFEERGLYLIVDGGYHKCPVQFP-----VTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAE 403
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.360e-34 Identity = 69/134 (51.49%), Postives = 89/134 (66.42%), Query Frame = 3
Query: 111 IQTLHEDGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGS 509
+EDG KG YLLVDNGYH+ +L+ PSK L++ + +SK LESV+KDVECFF +LKGRFRIL+L + Y+ +E++DNVF C ILHNMLH DG+D L E+ +W G EPE D G VG+
Sbjct: 266 FDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGT 399
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 132 bits (333), Expect = 7.630e-34 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3
Query: 126 EDGMWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECFFDVLKGRFRILQLPILYREKEKMDNVF-ACCILHNMLHAHDGLDVLEEDADWAGVNGQHDPEVAEPETDHGCVGS 509
+DG E KG YLLVDNGYH+ L+PPSK ++ + +SK LES +KDVEC+F +LKGRFRI +L I + ++E +DNVF CCILHNMLH+ D + E+ +WAG G H+ +P TD+ VGS
Sbjct: 239 QDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGS 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5663.13198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5663.13198.1 >prot_H-paniculata_contig5663.13198.1 ID=prot_H-paniculata_contig5663.13198.1|Name=mRNA_H-paniculata_contig5663.13198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp MWMEHKGVYLLVDNGYHERAMLMPPSKRFLNDEETWWSKTLESVQKDVECback to top mRNA from alignment at H-paniculata_contig5663:1396..2324- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5663.13198.1 ID=mRNA_H-paniculata_contig5663.13198.1|Name=mRNA_H-paniculata_contig5663.13198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=929bp|location=Sequence derived from alignment at H-paniculata_contig5663:1396..2324- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5663:1396..2324- >mRNA_H-paniculata_contig5663.13198.1 ID=mRNA_H-paniculata_contig5663.13198.1|Name=mRNA_H-paniculata_contig5663.13198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig5663:1396..2324- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |