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Homology
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: D7FRC3_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRC3_ECTSI) HSP 1 Score: 211 bits (538), Expect = 1.990e-60 Identity = 123/176 (69.89%), Postives = 133/176 (75.57%), Query Frame = 1
Query: 157 RDRGRGSYGREDSRDRNDRRG----ASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRGYGRSXXXXXXXGYGGYAARRXXXXXXXXXXXXXXXXSPPRRRDRSDS 672
RDRGRG YGR+DSR R+ + PGKVSLLVRNLTFRTR +DVKRIF+DFGD+RDVYLPLDFGTQKPRGFAFVEFY+PG+A A+DRLDGYNLDGRNISVLYAQEKRKRP+EMV KER E R YGR XXXX GY GYAARR SPPRRR RS S
Sbjct: 3 RDRGRGGYGRDDSRGRDXXXXXXXXSGPGKVSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDRLDGYNLDGRNISVLYAQEKRKRPDEMVHKERVEG-RGDYGRGRSXXXXRGYSGYAARRSR--------------SPPRRRSRSYS 163
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A7S2V1C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1C3_9STRA) HSP 1 Score: 125 bits (313), Expect = 3.930e-30 Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = 1
Query: 226 PGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKE 507
P VSLLVRN+++RTR ED++ IFS +GDIRDVYLP+D+ +++PRGFAFVEFY+ +A AKD LD Y LD R I+V++AQ++RKRPEEM E
Sbjct: 25 PDGVSLLVRNISYRTRAEDLRYIFSKYGDIRDVYLPMDYHSKEPRGFAFVEFYDGRDAADAKDALDRYALDNRQIAVVFAQQRRKRPEEMAHTE 118
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A7S3HCI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCI8_9STRA) HSP 1 Score: 113 bits (283), Expect = 9.530e-26 Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 160 DRGRGSYGREDSRDRNDR--------------------RGASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEM 495
DRGR R +SRDRNDR R SLLVRNL++R R ++++RIF +GDIRDVY+P D+ TQ+PRGFAFVEFY+ +A A D LD Y +DGR I+V++A+++RK +EM
Sbjct: 3 DRGRA---RSNSRDRNDRGDSXXXXXXXRSDRDDKVSSRDGPEATTSLLVRNLSYRVRADEIRRIFVRYGDIRDVYIPQDYHTQRPRGFAFVEFYDRRDAADALDHLDRYEMDGREIAVVFAKDRRKTADEM 131
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A7S2BL32_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BL32_9STRA) HSP 1 Score: 112 bits (280), Expect = 6.420e-25 Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 208 DRRGASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERD 513
DR G+VSLLVRN+++ R ED+ F ++G+IRDVY+P+D+ +QKPRGFAFVEFY P +A A+ +LD ++ GR I V++AQ +RKRPEEM +R+
Sbjct: 18 DRPAGEDGQVSLLVRNISYDCRKEDLADRFREYGEIRDVYVPVDYYSQKPRGFAFVEFYNPDDAEEARVKLDKTDVHGREIQVMFAQNRRKRPEEMSTMDRN 119
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A6A4DL65_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DL65_9STRA) HSP 1 Score: 110 bits (274), Expect = 4.890e-24 Identity = 53/104 (50.96%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 229 GKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRGYGR 540
G +SLLVRN++ R RPED+++ F +G++RDVY+P DF T++P+GFAFVEF EA A+ LDG +DGR+I V++AQE+RK ++M +ER++ +RG GR
Sbjct: 5 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREADDARRNLDGVRIDGRDIRVVFAQERRKSTDQM--REREKTEKRGGGR 106
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: W2JZ98_PHYPR (RRM domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2JZ98_PHYPR) HSP 1 Score: 109 bits (273), Expect = 1.810e-23 Identity = 51/96 (53.12%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 229 GKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDE 516
G +SLLVRN++ R RPED+++ F +G++RDVY+P DF T++P+GFAFVEF EA A+ LDG +DGR+I V++AQE+RK E+M +ER E
Sbjct: 5 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARRNLDGVRIDGRDIRVVFAQERRKSTEQMRERERTE 100
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A485LK32_9STRA (Aste57867_22331 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK32_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.070e-23 Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 142 TMSRDRDRGRGSYGREDSRDRNDRRGASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERD-EPPRR 528
+ SR RDR + R+D +D++ PG +SLLVRNL T +DVK +F G++RDVY PLDF T++ RGFAFVEF + A A +DG LDG ++V+ AQEKRK P+EM R++R+ PPRR
Sbjct: 35 STSRGRDR---TNSRDDDKDKSRGGPLKPG-ISLLVRNLNKSTSADDVKEVFGQHGEVRDVYTPLDFYTKESRGFAFVEFVDLESAENAIREMDGRELDGNRLTVVMAQEKRKTPQEMRRRDRNVSPPRR 160
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A5A7R078_STRAF (SC35-like splicing factor 33 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7R078_STRAF) HSP 1 Score: 109 bits (272), Expect = 2.240e-23 Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 163 RGRGSYGREDSRDRNDRRGASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKER 510
RG G GR R RG +P SLLVRNL RPED+KR FS FG ++D+YLP D+ T +PRGF FV++ EP +A AK +DG GR ++V++A+E RK+P EM +ER
Sbjct: 12 RGYGRRGRSPPRGGRHGRGDAP--TSLLVRNLRHDCRPEDLKRPFSQFGPVKDIYLPRDYYTNEPRGFGFVQYVEPADAADAKYHMDGQIFQGREVTVVFAEENRKKPTEMRARER 125
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A3F2S3V6_9STRA (RRM domain-containing protein (Fragment) n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3V6_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.800e-23 Identity = 50/99 (50.51%), Postives = 74/99 (74.75%), Query Frame = 1
Query: 235 VSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRG 531
+SLLVRN++ R RPED+++ F +G++RDVY+P D+ T++P+GFAFVEF EA A+ LDG +DGR+I V++AQE+RK ++M +E+ E PR G
Sbjct: 20 ISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFKSDREAEDARRNLDGVRIDGRDIRVVFAQERRKSTDQMREREKTEKPRGG 118
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A8K1CUS2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUS2_PYTOL) HSP 1 Score: 108 bits (270), Expect = 5.140e-23 Identity = 54/103 (52.43%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 235 VSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRGYGRS 543
+SLLVRNL+ R RP+D+++ F FGD+RDVY+P DF T++ +GFAFVEF +A A+ LDG LDGR I V++AQEKRK ++M ++R+ P+R GRS
Sbjct: 7 ISLLVRNLSRRMRPDDLRKEFEKFGDVRDVYIPKDFYTREAKGFAFVEFKTERDADEARHNLDGARLDGREIRVVFAQEKRKSSDQM--RDRERAPKRRGGRS 107
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 214.9 |
| Seed ortholog evalue | 4.5e-53 |
| Seed eggNOG ortholog | 2880.D7FRC3 |
| Preferred name | SCL25A |
| KEGG ko | ko:K12891,ko:K12900 |
| KEGG Pathway | ko03040,ko05168,map03040,map05168 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000184,GO:0000244,GO:0000245,GO:0000339,GO:0000340,GO:0000375,GO:0000377,GO:0000381,GO:0000387,GO:0000395,GO:0000398,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005845,GO:0005846,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006354,GO:0006355,GO:0006366,GO:0006368,GO:0006369,GO:0006370,GO:0006376,GO:0006379,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006408,GO:0006417,GO:0006446,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008104,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009889,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016073,GO:0016482,GO:0016604,GO:0016607,GO:0017069,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019904,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031440,GO:0031442,GO:0031503,GO:0031974,GO:0031981,GO:0032239,GO:0032241,GO:0032268,GO:0032386,GO:0032388,GO:0032774,GO:0032879,GO:0032991,GO:0033036,GO:0033119,GO:0034248,GO:0034518,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035061,GO:0036260,GO:0042221,GO:0042795,GO:0042802,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0045292,GO:0045934,GO:0045935,GO:0046483,GO:0046700,GO:0046822,GO:0046824,GO:0046831,GO:0046833,GO:0046907,GO:0048024,GO:0048025,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050684,GO:0050685,GO:0050686,GO:0050733,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051030,GO:0051049,GO:0051050,GO:0051082,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051253,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060341,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0070848,GO:0070887,GO:0071166,GO:0071310,GO:0071363,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097064,GO:0097159,GO:0097659,GO:0098781,GO:0098787,GO:0098789,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1903311,GO:1903312,GO:1903313,GO:1903506,GO:2000112,GO:2001141 |
| EggNOG free text desc. | RNA binding |
| EggNOG OGs | KOG0118@1,KOG0118@2759 |
| Ec32 ortholog description | RNA recognition motif domain |
| Ec32 ortholog | Ec-26_002620.1 |
| COG Functional cat. | H |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01009,ko03041 |
| Exons | 5 |
| Model size | 1847 |
| Cds size | 795 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5660.13195.1 >prot_H-paniculata_contig5660.13195.1 ID=prot_H-paniculata_contig5660.13195.1|Name=mRNA_H-paniculata_contig5660.13195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
MSRDRDRGRGSYGREDSRDRNDRRGASPGKVSLLVRNLTFRTRPEDVKRI
FSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGR
NISVLYAQEKRKRPEEMVRKERDEPPRRGYGRSRSRSRSRGYGGYAARRE
SRSPPRRRYSRSYSRSPPRRRDRSDSRDRGRGRRSRSRSRSRSRGGGGGR
GYSRSPSPRRDRDRSPSRSPPRGGYRGRDDDGDHGSANGNGAHHHDDDRD
GGHEDDGGRGDPGQ* back to topmRNA from alignment at H-paniculata_contig5660:6657..12963+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5660.13195.1 ID=mRNA_H-paniculata_contig5660.13195.1|Name=mRNA_H-paniculata_contig5660.13195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6307bp|location=Sequence derived from alignment at H-paniculata_contig5660:6657..12963+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGATACATAAGCGAGACCGAGAGGTTGAGAATCACCAACAGTTACAGGT
ACAACCAGGAAGATAAACAGAATTCACATCGGAGCCTGCAAACACGTTCC
AATATTGAAGGAAGGAAGAGGACAGAGGAAATAAACTACATACCATGAGC
AGGGACCGTGACAGGGGAAGGGGGAGCTACGGTCGGGAGGATAGCCGCGA
CCGCAACGATCGTCGCGGCGCCTCCCCGGGCAAGGTCTCCCTCTTAGTTC
GTAACCTGACCTTTCGCACCAGACCTGAGGATGTCAAGAGGATATTTTCA
GATTTTGGGGACATCAGGGATGTCTACCTCCCGCTTGACTTCGGCACCCA
GTGAGTGAAGTTTACATTGGGGAAGAGGGGTGTGGTGACAGGGGATCGAG
CCGAAAGCATCATGAGTGTCCATGAACGAATGGAGTGCATATTTTGCTGA
ACTATCTGTGGATCTCTTTTTGTGATGGGAGTTGCAGGTGCCCTGCTTGT
AGTTTTGATTTTCGGTGGGTGGTTTTGGCGCCCTCTCCATTTCTACGGTA
ATTAGCATATATGAATCAATCCTACTGGTGGAAATTGCTCCACTGTTGGC
GTGAGCTATCGTGATCTCCAGCACATCAGTGCGATATGTGGGAAATTGTT
GTATCTTTGCCTTTGGCGTTTGCCGCCTGCCCTCCGTTGAAGTCTATAGC
TTCCATCATGAAGTAATATGAGCTGGTTCTGTTCAATCGCCCTTCTCGAA
AAAATGTGCAATCAGATACTCCACTTCACCACCGGTTATATTTCACACGC
ACGCGAGAAGCTTGTCAACATCTGCTGGCTCTACATCGCACTCGCTGCAC
CTTTGTGCTGCATGACATTCCGACCTTTCTCTGCCCTTGAGGCGAGGACG
TGTCCCTTTTTATTTCAGCGAAAACAGAAGGCACGAGTCTCGGGATCCAT
GGTCCTTGCTTCACTCTTGACTCGAAAAATGTGCGATCTTATGTCGACTA
GTTATATACTGTACATGCATTCTTGATGGCATACACACGTTTACATAAGC
AGTACCGTTAAACATCGAAGACCTTTGTACCGTTTTTTTCGGTCTCGAAA
CCTACTCATTGTCCATCTGCCCTGACTAGGTAGTACAGCCGAACGTACCT
GGTCCTAATGTCTTACCCTCAGGTTCCCCTCTCGATGGATGAGGTGCGGG
CTTGTATTGACTAGTAAACTAACGTTTGCATCGTCACTTTATGTGTAGAT
TGGACTTGAAAAAATTCGGAGCTGCAAATGTCGTCAAGCGGCGATACCTG
ATTTCATTCAAAAAGGTACAATACTCATGGTTCAAGGAGGGGGTACTTCC
ATGCTCAGTTAATCGTTCTATCGTACTTAACTTGAACGTTTTGGTTCCAA
CCATTTGTCTGCAACCGGTAGCTGGTTTTGACAGTAGTAAACAGGATGAG
CCACTCTCTGCACCACGTCTAGATATATGACGGCCGGTGCTGTGTAGTAA
ATGCTGGCCAGTATCGAGGTTTATTACAAAATCGAAAGTCTATTATGTGT
GCCGCCCCAAAAAACTGGTCACATAGCACGAAAACGGTTGGTAGTGATGA
TGTCTGATTGGAGGTAGCGCAACCCTCCCCTTGGGCATCTTGCATTTGCA
ATTTACTACCCGGAGACGCGCGCGCGGCGCAAGCGTCATGTCTAGTATGT
TTCATTTAGTCAAATGGTTTTAAAACCGTCGTTATCGTTTCCGTACCTTA
TGAGACATTATTGATCATGTAGGCGAACAGCTGAAAATTTAAGAAGGCGT
GTTTTATGATGATCGGTGACTGGCTCCCTGTTATTTCATCATGGCTGGTT
AAATTCATTACTTGGTCTTAATCCGCACGGGAGAGATGTCGTCAATTTTG
ATGGTGTTAGTTATCATGAGGAATATTCCATGTTTCACCTACAAAGCACA
TTCGAATGATAACAGTGATGCACTCTTGTAAGGTTTCCTGTGTTTCCCCC
GGCCATGTATTACGTAATCGCCGCGGCGTTTATTCCCCCGAGAGCTATGT
TGGGTATAACCCACTGGACTTCTCGTTTCAGCGTAAGTCAAGTCAGTTAT
CAGACTGTTGGGGGACAGGAGTGCATGCACGACTTCCGCTTGCTTCGAAT
ATCGTACTTTTTTGTGTCGCCCTTCATATATGTATCTGCCTAATGGGCCG
ATTACACGTGTTGTTGGATTTGTGGAATAATCGAGCGGTGCTGTTCTTCT
TCGTGTTTTTAGGAAGGGGCGGGGTGATGCAGGCTGACGCCCGCGAGCGA
TACGGTAAGAGGAGATTTCGACAAGGAAGATGGTGATGCGTGGGGCACAA
GTGAAGAGACGAGGCGAAGAGAAGAGAAGAGAGAAAGAGAAAGAGTCTCG
ATGACACGTCCCCCCCATGTTCAGCAAACCGTGTACTACAGACCCACCTA
GCTCAAGTCAAGTCAAGTTCAAGCAAGTGTGAAGGGTGGCAGGAAGATGA
TCATGATGGTGATGGTTTGGACGGTGATGAACCACCAACCATCGTGTGCC
TCTACCGCCTGCTCTTAGCTCAAGTCAAGTCGAGTTCAAGTGAAAGAAGT
CGAAGTCAAGTCAAGTGTCATGAAGTCACGTTCAAGTCAAGTCGTGCAGC
CCAAGTCCGAGCAGCCAGTCAGCCAGCTGGCAAACATGTCACCCAATCGC
TGGGTTTCTGTGTGCGTGCTGTGGCCCACGGGCCGTGTGCTGGAGCAAGA
CTTCTTATCACGCGTGGCATGTTGAAGGTGGTCGTGAAAAGTAAGAGGAC
GAAACGCCGTGACTATTTTCGACCCTAAAGATCACGTATTGCCCGCTCAT
TTTGTACCCGTTCTTTTCTGCTTCGTTCGCGGAGTACATCCCTTGTCCGT
GTGCTCTTTTGAGTCCCCACGGAGTGCTTCAATTTTCAGTTGATAATCGA
CTTTTGCACAGAGTCCGAGTTAAGACCGGTCTTGTGTCCTTGTGCTATCT
TCCTTTTTGTTCACCCCTTCCCATGGTTCTCGATGCGCTAGACGGAGATT
GGGTTTGAACATGACCTAAAACTGTGCGCTGTTGGCGAGAGCAACGTCTG
TCGCCTCGTGCTTAGCTCAGATATACACGCCCGGTTCATCGTCTTGACTA
CTGCTAATAAGAAGTGTTGCTGTTGTTCCGTTGCCCGTTTCCCGTTTGCC
TGCCCCCTGGTCCGCGCGTTGTTTTTGTTGGTCGTTACTGCTGTGATCTG
TGCCGACATGGTCGTCGTGGATTGTTGCAGGAAGCCTCGGGGTTTCGCGT
TCGTGGAGGTGAGAGGCGGGATGGAAGGTGGAACGGGTAGTGTTCGCCAT
TGGGTGACGCGTGAAAAGAAGCGGCCAAATTACTCTGTGGAAACTCATGG
ATTTTTTACCAACCCTAGTGTAGTACGAGCATCGCCATGGTGATGAAAAA
TGGCATGTAACAGCTGAGTTTGGCGAGTGCGATGTGTTCCGCAAGCACGT
CTGTTGCGTTTCGTTAACCTACCAAGGTCGGTGGTGGGTGAGCCCCTGTC
TTCCCTTGTGTGTTTTTTGTGTAAGTGATATATCATGGGTTATGGCACGT
TACCGATCCGTGTTTTCGACCTCGCAGGAGAGTGTATAGTTGACGCGAAC
ATTTAAATATGCAAATGTAGCACATGGTGACCTGTGTCGTATAGCACCAA
AAAACAGTCTCACGTGCCTGCCATTATGAAATGTTTGTTCACCAGCTACT
GTCCTAGGCTTTCCCTGGGTTGTTCAATCTGTTGTGCTGTCTGCCTATTG
AAGAGTTTAGTATTATTTATCTTCGGTGCCACTTCTTCGAAAACCTGGAT
TTTCGTGTTGACGCAATCTTGTGGAACAGTCGAGTCCTCCATTCCTCTTG
TTTCGTACACGTTGCAGTTTATGTGAACACACAATATTTGACCGTGAGAC
TTGTTATTCTTGGTGTCTCTCGTTTGTATCTTGACCGCAGTTTTACGAGC
CGGGTGAGGCAGGTCGTGCTAAGGACCGCCTGGACGGTTACAACCTCGAC
GGCCGCAACATCTCTGTTCTTTATGCCCAGGTGATTTTTTTTTCTCAGTA
TTCGAGTAAGAGTAGACGTCTCGCAATGATACCGGAATTGTGATTAATAC
ATGGCCATGCAAGATATCAACGAAATGAAGTTCCAATAGGGTTCACCTAC
GACTATTATAAAGGACCCCAGCACCTGCCTGCCACCGTCCACTTGCCGTC
GAATTAGCAGCTGCGAATGCATTGTGTTGCCGAAATGGCCTCCATTGTCG
TTCCCTCGATGCGTCGTCGCTATTCGAAACACTTCACATGAGAATGTTAC
GGTATCCAGACACCTATGGAAACGGTTCAAACTGGAACGGTCTTGTGTAT
GAAAAAAGACGTGCTTTCGCATGGCGCCGATGACGCCGATTCGAGCAAAG
CCAACGTGCACTTTCGCCCTACGTGATTTTGTCTTGCCCATCGTCGGCAG
GAAAAGCGCAAGAGACCCGAGGAGATGGTGAGGAAAGAGCGTGACGAGCC
CCCCCGCCGGGGCTACGGCCGCTCGAGGTCTAGGTCTCGCTCTCGTGGGT
ACGGTGGCTATGCTGCCCGTCGTGAGTCTCGCTCACCGCCCCGCCGCCGC
TACTCAAGGTCATACTCCAGGCAAGAAGCATGTGTTATGTTTAAGATGGT
TGTGGACAAATGGCTTGTTATCGCTCTTGGTGACGTTGCACGGATTTCGT
TAGCCTGGGGATTACGTGTCCGAGTTCGTGTTCGACCGTATGCTACGGAT
TCATGTGATCCAATAATTGTATCAACAATAAGACATGGTGATGAAAATAT
TCAAATATGACAGAACGAAACGGCCATATGTTAGTGGAAAAAAAGGTGGT
CAGATTTCGTTTTTTCCGACGTGGATTCGTCACTCAAAATGTGTCTCTAA
ACTGGTCCCAATCGAGAGCATGCCTGGTCAATGAACGGCCGTTGACACAG
CCAGCCATCAAGAAATAAACGAAGGCCCAAAACATGAATACGTCCCTCCC
TATCCCCCCTCCAACCATCCCATTTACTGATTCCGTCACCATTCGCAGGT
CACCCCCGCGCAGAAGGGACCGTAGCGACTCTCGGGACCGTGGTCGCGGC
CGTAGAAGCCGCTCTCGTAGTCGCTCACGCTCCCGGGGCGGGGGTGGTGG
GCGCGGGTATTCTCGTAGTCCATCTCCTCGGCGCGACAGGGACAGATCGC
CCTCACGCTCCCCGCCGCGAGGTGGTTACCGTGGGCGGGACGACGATGGT
GACCACGGCAGTGCTAACGGTAACGGAGCTCATCACCATGATGATGACAG
GGATGGTGGACACGAAGATGATGGGGGCAGGGGGGACCCCGGGCAGTAGA
TTTCGTTTGTTATATTGTTGAGAGCAAGGAAGTTCGGATGGACGTTTTGT
GTTCAATGTTTTGCGTGTGTACGACTTATGACGTAGTTTTTTTTTTTCTT
GTACTCAAATGCACAAAGTACTTTTGTGTAGTCATCTTGAACCGCCCAGA
GTGGCGGGGACTGAGTAGGTTTTTTTGGTGAAGTAATAACTGCCTACAAC
TCAAGGTCGTCTGTTCCGCAGAAGGGCTTTTTTTTTTTGAGATATAGTTG
TGGGTTTCGTTGTAGGAGTCTGGTCGATCGTGTTATATTTGTAGGATAAG
GGCGATGTATTCGTAAAGAGAAAACAGTGTGTTTTTTTGTTTTGCGATTG
TCCAGGTGGCGGAGCGGGACTTGGGCTTGTCTCTGCCCCGAGAAATATTG
GTCATTTGATATGTCTTGTTGCCCACTTTGGTATCTTGACCGAATGGACA
AAAAGAAGCAAGCTTGTAAAGTTGAGAAGGAGAGGCAGTGGGGAAGCCCA
GCTTTTCCGTGTATAGGTCACAGAAGAAGAAATAATCAATGGCAACGTAT
ACTACAGCATTGGAGTGGAAGGGGGCCGTTTTTGGTACGATCGTTCGACG
TTTTTGCATCTGTTGCAGGGATGGTTGCCATGAGCCGTTCGTTTGCACAC
GCGATTACAAACCGTCCGTTTACGCAGGATTTCTGTCCCAGTAACCTAAT
GAGGATCGTTGTAAGCTCGAGACTTCAGCCGAGTTTTGACCGAGAGCGAG
AAATCGATTCTGACCAAATATGTACGACCGCTTCCCCCAGCCGCACCGAT
AATACAGGCACATTTTCCAGGTCCAAATAAAGCGCTTAATTTTGAAGTTC
TATTTCCAACCAAACATTCTTACAAACAAATTGAATCTGGAATACCCCCA
TAAATGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5660:6657..12963+ >mRNA_H-paniculata_contig5660.13195.1 ID=mRNA_H-paniculata_contig5660.13195.1|Name=mRNA_H-paniculata_contig5660.13195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at H-paniculata_contig5660:6657..12963+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCAGGGACCGTGACAGGGGAAGGGGGAGCTACGGTCGGGAGGATAG
CCGCGACCGCAACGATCGTCGCGGCGCCTCCCCGGGCAAGGTCTCCCTCT
TAGTTCGTAACCTGACCTTTCGCACCAGACCTGAGGATGTCAAGAGGATA
TTTTCAGATTTTGGGGACATCAGGGATGTCTACCTCCCGCTTGACTTCGG
CACCCAATGAGCAGGGACCGTGACAGGGGAAGGGGGAGCTACGGTCGGGA
GGATAGCCGCGACCGCAACGATCGTCGCGGCGCCTCCCCGGGCAAGGTCT
CCCTCTTAGTTCGTAACCTGACCTTTCGCACCAGACCTGAGGATGTCAAG
AGGATATTTTCAGATTTTGGGGACATCAGGGATGTCTACCTCCCGCTTGA
CTTCGGCACCCAGAAGCCTCGGGGTTTCGCGTTCGTGGAGGAAGCCTCGG
GGTTTCGCGTTCGTGGAGTTTTACGAGCCGGGTGAGGCAGGTCGTGCTAA
GGACCGCCTGGACGGTTACAACCTCGACGGCCGCAACATCTCTGTTCTTT
ATGCCCAGTTTTACGAGCCGGGTGAGGCAGGTCGTGCTAAGGACCGCCTG
GACGGTTACAACCTCGACGGCCGCAACATCTCTGTTCTTTATGCCCAGGA
AAAGCGCAAGAGACCCGAGGAGATGGTGAGGAAAGAGCGTGACGAGCCCC
CCCGCCGGGGCTACGGCCGCTCGAGGTCTAGGTCTCGCTCTCGTGGGTAC
GGTGGCTATGCTGCCCGTCGTGAGTCTCGCTCACCGCCCCGCCGCCGCTA
CTCAAGGTCATACTCCAGGAAAAGCGCAAGAGACCCGAGGAGATGGTGAG
GAAAGAGCGTGACGAGCCCCCCCGCCGGGGCTACGGCCGCTCGAGGTCTA
GGTCTCGCTCTCGTGGGTACGGTGGCTATGCTGCCCGTCGTGAGTCTCGC
TCACCGCCCCGCCGCCGCTACTCAAGGTCATACTCCAGGTCACCCCCGCG
CAGAAGGGACCGTAGCGACTCTCGGGACCGTGGTCGCGGCCGTAGAAGCC
GCTCTCGTAGTCGCTCACGCTCCCGGGGCGGGGGTGGTGGGCGCGGGTAT
TCTCGTAGTCCATCTCCTCGGCGCGACAGGGACAGATCGCCCTCACGCTC
CCCGCCGCGAGGTGGTTACCGTGGGCGGGACGACGATGGTGACCACGGCA
GTGCTAACGGTAACGGAGCTCATCACCATGATGATGACAGGGATGGTGGA
CACGAAGATGATGGGGGCAGGGGGGACCCCGGGCAGTAGGTCACCCCCGC
GCAGAAGGGACCGTAGCGACTCTCGGGACCGTGGTCGCGGCCGTAGAAGC
CGCTCTCGTAGTCGCTCACGCTCCCGGGGCGGGGGTGGTGGGCGCGGGTA
TTCTCGTAGTCCATCTCCTCGGCGCGACAGGGACAGATCGCCCTCACGCT
CCCCGCCGCGAGGTGGTTACCGTGGGCGGGACGACGATGGTGACCACGGC
AGTGCTAACGGTAACGGAGCTCATCACCATGATGATGACAGGGATGGTGG
ACACGAAGATGATGGGGGCAGGGGGGACCCCGGGCAGTAG back to top
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