prot_H-paniculata_contig5659.13189.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5659.13189.1
Unique Nameprot_H-paniculata_contig5659.13189.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length250
Homology
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: D8LLC7_ECTSI (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC7_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 3.310e-110
Identity = 176/253 (69.57%), Postives = 204/253 (80.63%), Query Frame = 0
Query:    1 MRLFETGMYLSATSLLLLPATSVALLGPAGG-RPVRYAAAGVRGPSS---SVEGRAAPCMVAAEGASFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAALGFGKSLADKKKDIEEAVPGSTPKKIGF 249
            MR+FE+ + L+    L    T+ A + PA   R +R A AG    +S   S  G  A  M+AAEG +FGELDGT+VRVGIISTRWN+EIV RLTDGVKE+LK CNVT+SNIFET+VPGAFELPLAARFL+LSQTVDAVVCVGCLIKG+TMHFEYIA++TC GLMDVS+ TSTPV+LGVLTC +EEQA KRSTGDN+HG+DWGKTAVEM LLRMSATG+GK +  ALGFGKSL DKK   + A+PGS PKKIGF
Sbjct:    1 MRVFESALTLAGG--LFACRTASAFVAPAASIRALRNAPAGGASTTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTESNIFETKVPGAFELPLAARFLSLSQTVDAVVCVGCLIKGDTMHFEYIAESTCKGLMDVSIQTSTPVVLGVLTCTEEEQAIKRSTGDNNHGVDWGKTAVEMGLLRMSATGVGKKAGGALGFGKSLDDKKDGKDGAIPGSKPKKIGF 251          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A7S2RMT1_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMT1_9STRA)

HSP 1 Score: 241 bits (614), Expect = 6.960e-77
Identity = 125/186 (67.20%), Postives = 146/186 (78.49%), Query Frame = 0
Query:   64 FGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAALGFGKSLADKKKDIEEAVPGSTPKKIGF 249
            FGEL+G + R+GIISTRWN EI+  L  GVK+AL+ C V D+NIFET+VPGAFELPLAARFLALS TVDAVVCVGCLIKG+TMHFEYI D   +GLM+V L TSTPV+ GVLT +DEEQA  RSTG+N+HG+ WGKTAVEMALLR SA G GKS S ++GFG   A K KD  + +PG   +  GF
Sbjct:   45 FGELNGESCRIGIISTRWNPEIIGDLKSGVKQALEECKVKDANIFETEVPGAFELPLAARFLALSGTVDAVVCVGCLIKGDTMHFEYICDTVSSGLMNVGLQTSTPVVFGVLTVMDEEQAKARSTGENNHGLSWGKTAVEMALLRQSALGQGKSMSMSMGFGN--ATKVKD--DVLPGD--RSFGF 224          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A835YTX6_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX6_9STRA)

HSP 1 Score: 230 bits (587), Expect = 9.500e-73
Identity = 122/193 (63.21%), Postives = 141/193 (73.06%), Query Frame = 0
Query:   60 EGASFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAALGFGKSLA---DKKKDIEEAVPGSTPKKIGF 249
            EG +F +LDG+NVRVGII TRWN EIV  L  GVKEAL+ C V   +IFET+VPGA+ELPLAARFLALSQTVD++VC+GCLIKGETMHFEYIADA  +GLM V L T+ P + GVLT LDE QA  RS G+N+HG+ WG TAVEM LLRMSA G GK+S       + L+   DKK D E        KKIGF
Sbjct:   42 EGITFDDLDGSNVRVGIIRTRWNGEIVGNLRSGVKEALEKCGVKPEHIFETEVPGAYELPLAARFLALSQTVDSIVCLGCLIKGETMHFEYIADAVSSGLMQVGLSTTCPTVFGVLTTLDEAQAKSRSEGENNHGVGWGMTAVEMGLLRMSALGQGKASGMXXXXAEGLSIVGDKKADDER-------KKIGF 227          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A6U1PVR1_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PVR1_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.160e-71
Identity = 116/207 (56.04%), Postives = 150/207 (72.46%), Query Frame = 0
Query:   34 VRYAAAGVRGPSSSVEGRAAPCMVAAEGASFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGM---GKSSSAALGFGKSLADKKKDIEE 237
            V +   G+ G S+S   R    +   +  SFGELDG+ VR+GII TRWN++I+  L++GV+++L  C V + NIFET+VPG+FELPLAARFLA+S  VDA++C+GCLIKG+TMHFEYIADA   G+M+V + TS PV+ GVLTCLDE QA KRSTG+N+HG+ WG TAVEMALLR SA GM   G   + A G    +  +KK+ EE
Sbjct:   15 VAFHVPGLSGLSTSYGVRGRSVLSMNKEVSFGELDGSKVRIGIIKTRWNEQIMDGLSEGVQKSLNDCGVEEKNIFETEVPGSFELPLAARFLAMSNRVDAIICLGCLIKGDTMHFEYIADAVAKGIMNVGISTSVPVVFGVLTCLDEAQAVKRSTGENNHGLSWGLTAVEMALLRRSAMGMETGGAKIAFASGVDTEIKKEKKESEE 221          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A7S0UIY0_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIY0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.760e-68
Identity = 114/186 (61.29%), Postives = 137/186 (73.66%), Query Frame = 0
Query:   63 SFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAA-----LGFGK--SLADKKKDIEEAVPG 241
            SFG+LDG+++R+GII TRWN E VT L DG K+ALK CNV + NIFET +PGA+ELPL+ARFLALS TVDA+V  G LIKGETMHFEYI+DA  +GLM V L T  PV+ GVL C++E+Q   RS+GDN+HG DWGKTAVEMALLR  A  +   S  A     LGF K   + D+KK  E+A PG
Sbjct:    1 SFGDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSARFLALSGTVDAIVTAGVLIKGETMHFEYISDAVSSGLMSVQLQTQCPVVYGVLNCMNEDQVKARSSGDNNHGYDWGKTAVEMALLRNEALNIASGSGKATKLMDLGFSKVEPVGDEKK--EKAKPG 184          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A7S4EE69_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EE69_9STRA)

HSP 1 Score: 219 bits (557), Expect = 3.540e-68
Identity = 112/184 (60.87%), Postives = 138/184 (75.00%), Query Frame = 0
Query:   63 SFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAA-----LGFGKSLADKKKDIEEAVPG 241
            SF +LDG+++R+GII TRWN E VT L DG K+ALK CNV + NIFET +PGA+ELPL+ARFLALS TVDA+V  G LIKGETMHFEYI+DA  +GLM+V L TS PV+ GVL CL+++Q   RSTGDN+HG DWGKTAVEMALLR  A  + K S A      +GF K   D +K+ +++ PG
Sbjct:   45 SFDDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSARFLALSGTVDAIVTAGVLIKGETMHFEYISDAVSSGLMNVQLQTSCPVVYGVLNCLNDDQVKSRSTGDNNHGYDWGKTAVEMALLRNEALNVSKMSGAKSKLADVGFSKESTDGEKEKKKS-PG 227          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A7S0KAM5_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAM5_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.300e-68
Identity = 112/190 (58.95%), Postives = 137/190 (72.11%), Query Frame = 0
Query:   52 AAPCMVAAEGA--SFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAALGFGKSLADKKKDIEEAV 239
            A   + AA+G   +FGELDGT+VRVGII T+WNK  V  + +G K+ALK CNVT++NIFET+VPGA+ELP AA+ LALS TVD ++C G LIKG TMHFEYI DA  +G+M+V L T+ PVI GVLTCL EEQ  +RSTG+N+HG  WGKTAVEMALLR  A G+   S   +GF  SL       +E V
Sbjct:   27 ATTALKAADGVEVTFGELDGTDVRVGIIKTKWNKVHVDNVVNGAKDALKECNVTEANIFETEVPGAYELPFAAKMLALSGTVDVIICAGVLIKGGTMHFEYICDAVSSGIMNVGLQTNVPVIFGVLTCLTEEQVVERSTGNNNHGDGWGKTAVEMALLRKEALGIKTQSKGPIGFDASLTTAGDGSKEKV 216          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A7S2S1K9_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S1K9_9STRA)

HSP 1 Score: 216 bits (551), Expect = 2.440e-67
Identity = 113/194 (58.25%), Postives = 137/194 (70.62%), Query Frame = 0
Query:   56 MVAAEGASFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAALGFGKSLADKKKDIEEAVPGSTPKKIGF 249
            M A     FGELDG NVR+GII TRWN E VT L +G ++ALK  NV D NIFET+VPGAFELP AA+ LALS TVDA++C G LIKG+TMHFEYI+D   +G+M V L T+TP ILGVLTCL+E+Q   RS+ DN+HG DWGKTAVEMALL+  A  MGK   + +GF  +     KD +    G   K++GF
Sbjct:   36 MSADSEVDFGELDGKNVRIGIIRTRWNDEHVTNLVEGARKALKETNVEDDNIFETEVPGAFELPFAAKLLALSGTVDAIICAGVLIKGDTMHFEYISDTVTSGIMSVGLQTNTPCILGVLTCLNEDQVKARSSEDNNHGYDWGKTAVEMALLKTEA--MGKKEISGMGFQNATPLDLKDDK----GEEKKRVGF 223          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A448Z8V0_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8V0_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.320e-67
Identity = 115/188 (61.17%), Postives = 137/188 (72.87%), Query Frame = 0
Query:   63 SFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSSAALGFGKSLADKKKDIEEAVPGSTPKKI-GF 249
            SFG+LDG++VR+GII TRWN E VT L DG KEALK CNV + NIFET + GA+ELPL+ARFLALS TVDA+V  G LIKGETMHFEYI+DA  +GLM+V L TS PV+ GVL C++E+Q   RS+GDN+HG DWGKTAVEMALLR  A  +     A  G    LAD     +EA  G++ KK  GF
Sbjct:   47 SFGDLDGSDVRIGIIRTRWNDEHVTNLVDGCKEALKECNVKEENIFETSIAGAYELPLSARFLALSGTVDAIVTAGVLIKGETMHFEYISDAVSSGLMNVQLQTSCPVVYGVLNCMNEDQVKARSSGDNNHGYDWGKTAVEMALLRNEALNI----KAMGGSENKLADVGFSKKEASEGASEKKAXGF 230          
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Match: A0A1Z5JVA4_FISSO (6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVA4_FISSO)

HSP 1 Score: 211 bits (537), Expect = 2.180e-65
Identity = 105/173 (60.69%), Postives = 129/173 (74.57%), Query Frame = 0
Query:   63 SFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGCNVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEYIADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKTAVEMALLRMSATGMGKSSS-----AALGFGKSLAD 230
            SF  LDG+ +R+GII TRWN+E V  L  G+K+ LK C V+D+NIFET VPG+FELP+AARFLAL+ T DA++  G LIKG+TMHFE+IADA   G+M++ L TSTPV+ GVLTC +E+Q   RSTGDN+HG DWGKTAVEMALLR  A G  K        AA+GFGK+  D
Sbjct:   29 SFDNLDGSQMRIGIIKTRWNEEHVNNLVAGIKKGLKECKVSDTNIFETSVPGSFELPMAARFLALTGTCDAIITTGVLIKGDTMHFEFIADAVAKGIMNIGLQTSTPVVFGVLTCQNEQQVKDRSTGDNNHGYDWGKTAVEMALLRTEALGGKKGEESKEMLAAMGFGKADED 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5659.13189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC7_ECTSI3.310e-11069.576,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ec... [more]
A0A7S2RMT1_9STRA6.960e-7767.206,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rh... [more]
A0A835YTX6_9STRA9.500e-7363.216,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Tr... [more]
A0A6U1PVR1_9STRA1.160e-7156.046,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Fi... [more]
A0A7S0UIY0_9STRA1.760e-6861.296,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ps... [more]
A0A7S4EE69_9STRA3.540e-6860.876,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ps... [more]
A0A7S0KAM5_9STRA7.300e-6858.956,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Le... [more]
A0A7S2S1K9_9STRA2.440e-6758.256,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Eu... [more]
A0A448Z8V0_9STRA4.320e-6761.176,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ps... [more]
A0A1Z5JVA4_FISSO2.180e-6560.696,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Fi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036467Lumazine/riboflavin synthase superfamilyGENE3D3.40.50.960coord: 57..126
e-value: 8.8E-19
score: 69.6
coord: 127..216
e-value: 2.3E-35
score: 123.8
IPR036467Lumazine/riboflavin synthase superfamilySUPERFAMILY52121Lumazine synthasecoord: 66..207
IPR034964Lumazine synthaseTIGRFAMTIGR00114TIGR00114coord: 72..206
e-value: 1.8E-43
score: 145.9
IPR034964Lumazine synthasePANTHERPTHR210586,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASEcoord: 65..207
IPR034964Lumazine synthaseHAMAPMF_00178Lumazine_synthcoord: 67..211
score: 23.732
IPR002180Lumazine/riboflavin synthasePFAMPF00885DMRL_synthasecoord: 72..207
e-value: 6.1E-50
score: 168.7
NoneNo IPR availablePANTHERPTHR21058:SF06,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASEcoord: 65..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.671

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5659contigH-paniculata_contig5659:2248..12827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5659.13189.1mRNA_H-paniculata_contig5659.13189.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5659 991..12897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5659.13189.1 ID=prot_H-paniculata_contig5659.13189.1|Name=mRNA_H-paniculata_contig5659.13189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
MRLFETGMYLSATSLLLLPATSVALLGPAGGRPVRYAAAGVRGPSSSVEG
RAAPCMVAAEGASFGELDGTNVRVGIISTRWNKEIVTRLTDGVKEALKGC
NVTDSNIFETQVPGAFELPLAARFLALSQTVDAVVCVGCLIKGETMHFEY
IADATCNGLMDVSLLTSTPVILGVLTCLDEEQATKRSTGDNSHGIDWGKT
AVEMALLRMSATGMGKSSSAALGFGKSLADKKKDIEEAVPGSTPKKIGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036467LS/RS_sf
IPR034964LS
IPR002180LS/RS