prot_H-paniculata_contig5658.13188.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5658.13188.1
Unique Nameprot_H-paniculata_contig5658.13188.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: A0A6H5KTC2_9PHAE (Ribosomal_L28e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTC2_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 3.970e-75
Identity = 117/157 (74.52%), Postives = 138/157 (87.90%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQKG-KKPMAINTGRKNLKESA 156
            MTNVSNEL+WSLVR N+CFLYKRNG+T RSGKVVL+AEPNNL NVNS+K+SGLANSKAVG+ FA+D K RPCA +TLKSSKN NKPKKSVG++L+KK   SV+ AI+KQT GTNYRPDL+ AALVRWS+++ ALRVQKG +KPM +N GRKNLK +A
Sbjct:    1 MTNVSNELVWSLVRRNTCFLYKRNGQTKRSGKVVLTAEPNNLTNVNSYKYSGLANSKAVGIQFAKDPKDRPCAAITLKSSKNGNKPKKSVGRSLLKKTHPSVSQAIMKQTGGTNYRPDLQHAALVRWSKVHRALRVQKGERKPMTVNAGRKNLKATA 157          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: A0A836CDH5_9STRA (Putative 60S ribosomal protein L28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDH5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.590e-42
Identity = 81/155 (52.26%), Postives = 103/155 (66.45%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQKGKKPMAINTGRKNLKES 155
            M+ + + L+WSLVR N+CF+ KRNG T RSG+VVLS EP NL NV+SFK+SGLANSKAVG+    D K RPC VLT KSSK VN+P K+V + L+KK   S A A+   T GT YR DL   AL R+  +N A R ++G     +  GR+  K +
Sbjct:    1 MSIIPDSLVWSLVRQNNCFMQKRNGNTRRSGRVVLSGEPMNLKNVHSFKYSGLANSKAVGIAEGADDKGRPCVVLTQKSSKKVNQPAKAVAQTLLKKNNRSSARAVKAITAGTFYREDLTQDALARFCIVNRATRAKRGLAKPMVTKGRRAKKSA 155          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: A0A7S2DNV5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNV5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.110e-26
Identity = 63/142 (44.37%), Postives = 81/142 (57.04%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGF---AEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQKG 139
            M    + L W LV+  +CF  KRNG+T RSG +VLS+EP NL N+N+FK+SGLANSKA+   F    ED   +    + LK SKN  +P K      + K F  V   I  QT    YR DL  AAL RWS ++   +V+KG
Sbjct:    1 MATCPDSLTWMLVKNQNCFQQKRNGQTKRSGMIVLSSEPGNLRNINAFKYSGLANSKAIRFDFKEEGEDDDKKIKMSMGLKISKNGKRPNKQYSTIPLNKDFRRVEKCIKAQTVDQAYRADLLDAALARWSALHRYSKVKKG 142          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: A0A834WEF1_9FABA (60S ribosomal protein L28-2 n=2 Tax=Caesalpinioideae TaxID=3804 RepID=A0A834WEF1_9FABA)

HSP 1 Score: 106 bits (265), Expect = 1.700e-26
Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQK 138
            M NVS +L+W +V+ N+CFL K  GR  +S  V  S E NNL N+NSFKHSGLAN K V +  A   +S    +L    +K  NKP   + K+++KK F  +A A+I Q    +YRPDL+ AAL R S +N +L+V K
Sbjct:    1 MANVSGQLVWEIVKRNNCFLVKEFGRGTQS--VQFSKESNNLYNLNSFKHSGLANKKTVTIQPAGKDQS---VLLGTTKTKKQNKPANLLHKSVMKKEFPRMAKAVINQVADNHYRPDLKKAALARLSAVNRSLKVAK 133          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: RL281_ARATH (60S ribosomal protein L28-1 n=13 Tax=Brassicaceae TaxID=3700 RepID=RL281_ARATH)

HSP 1 Score: 106 bits (264), Expect = 1.980e-26
Identity = 63/138 (45.65%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQK 138
            M  V  +LIW +V+ N+CFL K+ GR   + KV  S E NNL NV+S+KHSGLAN K V +  A+  ++    VL    +K  NKPK SV K+++KK F  ++ A+  Q     YRPDL+ AAL R S I+  LRV K
Sbjct:    1 MATVPGQLIWEIVKNNNCFLVKQFGRG--NSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQA---VVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRVAK 133          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: RL282_ARATH (60S ribosomal protein L28-2 n=41 Tax=Brassicaceae TaxID=3700 RepID=RL282_ARATH)

HSP 1 Score: 104 bits (259), Expect = 1.120e-25
Identity = 62/138 (44.93%), Postives = 83/138 (60.14%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQK 138
            M  V  +LIW +V+ N+CFL K+ GR   + KV  S E NNL+N+NS+KHSGLAN K V +  A   +     VL    +K  NKPK SV K+++KK F+ ++  +  Q     YRPDL+ AAL R S I+  LRV K
Sbjct:    1 MATVPGQLIWEIVKRNNCFLVKQFGRG--NAKVQFSKESNNLVNINSYKHSGLANKKTVTIQAAGKDQG---VVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALARLSAISKGLRVAK 133          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: UPI00053C4193 (60S ribosomal protein L28-1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4193)

HSP 1 Score: 104 bits (259), Expect = 1.250e-25
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQK 138
            M  V  +LIW +V+ N+CFL K+ GR   + KV  S E NNL N+NS+KHSGLAN K+V +  A+  ++    VL    +K  +KP  SV K+++KK F  +A A+  Q     YRPDLE AAL R S I+ +L+V K
Sbjct:    1 MATVPGQLIWEIVKNNNCFLVKQFGRG--NAKVQFSKETNNLYNLNSYKHSGLANKKSVSIQPADKEQA---IVLGTTKTKKQSKPSASVNKSVLKKEFPRMAKAVANQVSDNYYRPDLEKAALARLSVIHRSLKVTK 133          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: A0A4D9CYB5_9STRA (Ribosomal_L28e domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYB5_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.970e-25
Identity = 64/152 (42.11%), Postives = 90/152 (59.21%), Query Frame = 0
Query:    4 VSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQKG-KKPMAINTGRKNLKE 154
            +S+ L+W  ++ N+CFL KR GRTAR G V  S+EP NL   NSFK+SGLANSKAV +  AE  K  P   +  K  K++ KP     +  + K FA+   +I   T+ + YR DL+  AL R+S +    +V+KG  KP+ +  GR + KE
Sbjct:    1 MSDALVWECIKNNNCFLTKR-GRTARVGGVQFSSEPFNLAKKNSFKNSGLANSKAVDLSVAEGGKYGPKITMATKGKKSLKKPATLANETPLNKAFATSVRSIKGVTEKSGYRKDLQPIALARYSLLKRYTQVKKGLAKPIPVKMGRVSRKE 151          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: A0A0D3DWG0_BRAOL (Ribosomal_L28e domain-containing protein n=7 Tax=Brassica TaxID=3705 RepID=A0A0D3DWG0_BRAOL)

HSP 1 Score: 103 bits (256), Expect = 3.170e-25
Identity = 62/138 (44.93%), Postives = 83/138 (60.14%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQK 138
            M  V  +LIW +V+ N+CFL K+ GR   + KV  S E NNL N+NS+KHSGLAN K V +  A+  +     VL    +K  NKPK SV K+++KK F  ++ A+  Q     YRPDL+  AL R S I+ +LRV K
Sbjct:    1 MATVPGQLIWEIVKTNNCFLVKQFGRG--NAKVQFSKETNNLCNLNSYKHSGLANKKTVTIQAADKEQG---VVLATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKFALARLSVISKSLRVAK 133          
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Match: V4M5S2_EUTSA (Ribosomal_L28e domain-containing protein n=2 Tax=Eutrema TaxID=98005 RepID=V4M5S2_EUTSA)

HSP 1 Score: 105 bits (261), Expect = 4.330e-25
Identity = 63/138 (45.65%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKHSGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFASVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQK 138
            M  V  +LIW +V+ N+CFL K+ GR   + KV  S E NNL N+NS+KHSGLAN K V +  A+  ++    VL    +K  NKPK SV K+++KK F  ++ A+  Q     YRPDL+ AAL R S I+ +LRV K
Sbjct:   81 MATVPGQLIWEIVKTNNCFLVKQFGRG--NAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQPADKEQA---VVLATTKTKKQNKPKVSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALARLSVISKSLRVAK 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5658.13188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTC2_9PHAE3.970e-7574.52Ribosomal_L28e domain-containing protein n=2 Tax=E... [more]
A0A836CDH5_9STRA2.590e-4252.26Putative 60S ribosomal protein L28 n=1 Tax=Tribone... [more]
A0A7S2DNV5_9STRA1.110e-2644.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A834WEF1_9FABA1.700e-2645.6560S ribosomal protein L28-2 n=2 Tax=Caesalpinioide... [more]
RL281_ARATH1.980e-2645.6560S ribosomal protein L28-1 n=13 Tax=Brassicaceae ... [more]
RL282_ARATH1.120e-2544.9360S ribosomal protein L28-2 n=41 Tax=Brassicaceae ... [more]
UPI00053C41931.250e-2544.9360S ribosomal protein L28-1 n=1 Tax=Tarenaya hassl... [more]
A0A4D9CYB5_9STRA1.970e-2542.11Ribosomal_L28e domain-containing protein n=1 Tax=N... [more]
A0A0D3DWG0_BRAOL3.170e-2544.93Ribosomal_L28e domain-containing protein n=7 Tax=B... [more]
V4M5S2_EUTSA4.330e-2545.65Ribosomal_L28e domain-containing protein n=2 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029004Ribosomal L28e/Mak16PFAMPF01778Ribosomal_L28ecoord: 8..131
e-value: 1.4E-28
score: 99.9
NoneNo IPR availableGENE3D3.30.390.110coord: 5..138
e-value: 9.1E-38
score: 131.3
IPR002672Ribosomal protein L28ePANTHERPTHR1054460S RIBOSOMAL PROTEIN L28coord: 1..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5658contigH-paniculata_contig5658:6738..10144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5658.13188.1mRNA_H-paniculata_contig5658.13188.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5658 6738..10859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5658.13188.1 ID=prot_H-paniculata_contig5658.13188.1|Name=mRNA_H-paniculata_contig5658.13188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MTNVSNELIWSLVRGNSCFLYKRNGRTARSGKVVLSAEPNNLMNVNSFKH
SGLANSKAVGVGFAEDTKSRPCAVLTLKSSKNVNKPKKSVGKALVKKPFA
SVAGAIIKQTKGTNYRPDLESAALVRWSRINLALRVQKGKKPMAINTGRK
NLKESA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029004L28e/Mak16
IPR002672Ribosomal_L28e