prot_H-paniculata_contig56578.13187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56578.13187.1
Unique Nameprot_H-paniculata_contig56578.13187.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length185
Homology
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: A0A8F0JXT5_9PHAE (Ribosomal protein L2 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXT5_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.660e-110
Identity = 161/179 (89.94%), Postives = 166/179 (92.74%), Query Frame = 0 
Query:    6 PVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSRL 184
            P  LKIGNTI+SGP VPLEIGN+LPLENIPLGTSVHNIELSYNKGGQ+          VRAAGTFARVLAKENNYVTLRLPSKEIRL+HKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKK+KYSDIYIVRSRL
Sbjct:  107 PDSLKIGNTIVSGPTVPLEIGNALPLENIPLGTSVHNIELSYNKGGQV----------VRAAGTFARVLAKENNYVTLRLPSKEIRLIHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKSKYSDIYIVRSRL 275
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: D1GJS9_FUCVE (50S ribosomal protein L2, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJS9_FUCVE)

HSP 1 Score: 309 bits (791), Expect = 4.070e-104
Identity = 154/181 (85.08%), Postives = 160/181 (88.40%), Query Frame = 0 
Query:    4 IHPVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSRL 184
            I P  LKIGN ILSGP  PL+IGN+LPLENIPLGTSVHNIELSYNKGGQI          VRAAGT AR+LAKENNYVT+RLPSKEIRL+HKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEG A IGRPKAYTPWGK ALGVKTRKK KYSDIYIVRSR+
Sbjct:  105 ICPDSLKIGNRILSGPNAPLDIGNALPLENIPLGTSVHNIELSYNKGGQI----------VRAAGTSARILAKENNYVTVRLPSKEIRLIHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGHATIGRPKAYTPWGKPALGVKTRKKEKYSDIYIVRSRI 275
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: A0A141BSN8_9PHAE (50S ribosomal protein L2, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSN8_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 5.780e-104
Identity = 152/181 (83.98%), Postives = 161/181 (88.95%), Query Frame = 0 
Query:    4 IHPVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSRL 184
            I P  LKIGN ILSGP  P+EIGN+LPLENIPLGTSVHNIELS+NKGGQI          VRAAGT AR+LAKENNYVTLRLPSKEIRL+HKSCYATIG VSN+DHNNIKLGKAGRKRWLG+RPTVRGSVMNPCDHPHGGGEGRA IGRPKAYTPWGK+ LGVKTRKKAKYSDIYIVRSR+
Sbjct:  105 ICPDSLKIGNKILSGPDAPIEIGNALPLENIPLGTSVHNIELSFNKGGQI----------VRAAGTAARILAKENNYVTLRLPSKEIRLIHKSCYATIGTVSNKDHNNIKLGKAGRKRWLGVRPTVRGSVMNPCDHPHGGGEGRATIGRPKAYTPWGKSTLGVKTRKKAKYSDIYIVRSRI 275
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: D1J749_ECTSI (50S ribosomal protein L2, chloroplastic n=39 Tax=Phaeophyceae TaxID=2870 RepID=D1J749_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 3.160e-101
Identity = 147/180 (81.67%), Postives = 162/180 (90.00%), Query Frame = 0 
Query:    4 IHPVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSR 183
            I P  LKIG+ I+SGP+VP+EIGN+LPLE IPLGT++HNIELSYNKGGQI          VRAAGT AR+LAKE++YVT+RLPSKEIR++HK+CYATIGIVSN+DHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRA IGRPKAYTPWGKAALGVKTRKK KYSDIYIVRSR
Sbjct:  105 ICPDSLKIGSKIISGPSVPIEIGNALPLEKIPLGTAIHNIELSYNKGGQI----------VRAAGTSARILAKESDYVTVRLPSKEIRIIHKNCYATIGIVSNKDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRATIGRPKAYTPWGKAALGVKTRKKEKYSDIYIVRSR 274
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: A0A2I4Q342_9PHAE (50S ribosomal protein L2, chloroplastic n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2I4Q342_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 1.490e-99
Identity = 145/180 (80.56%), Postives = 160/180 (88.89%), Query Frame = 0 
Query:    4 IHPVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSR 183
            I P  ++IG+ I+SGP  PLEIGN+LPL+ IPLGTSVHNIELSYNKGGQI          VRAAGTFAR+LAKEN+YVTLRLPSKEIRLVH++CYATIGIVSNRD+NNI+LGKAGRKRWLG+RPTVRGSVMNPCDHPHGGGEGRA IGRPKAYTPWGK ALGVKTRKK +YSDI+IVRSR
Sbjct:  105 ICPEEVRIGSRIMSGPTAPLEIGNALPLDKIPLGTSVHNIELSYNKGGQI----------VRAAGTFARILAKENDYVTLRLPSKEIRLVHRTCYATIGIVSNRDNNNIRLGKAGRKRWLGVRPTVRGSVMNPCDHPHGGGEGRATIGRPKAYTPWGKPALGVKTRKKERYSDIFIVRSR 274
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: A0A8E5F969_9PHAE (Ribosomal protein L2 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5F969_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 3.570e-90
Identity = 133/179 (74.30%), Postives = 152/179 (84.92%), Query Frame = 0 
Query:    6 PVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSRL 184
            P  L++ + I SGP VP+ IGN+LPLE IPLGT++HN+ELSYNKGGQI          VRAAGT A++LAKENNYVT+RLPSKE+R+V+KSCYATIG V NRDHN IKL KAG+ RWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGK+ALGVKTRK  KYS+I+IVR R+
Sbjct:  104 PQDLEVNDIICSGPNVPIAIGNALPLEMIPLGTAIHNLELSYNKGGQI----------VRAAGTSAKILAKENNYVTVRLPSKEVRVVYKSCYATIGKVGNRDHNKIKLRKAGQNRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKSALGVKTRKIQKYSNIFIVRPRI 272
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: A0A7S6U9X8_9STRA (50S ribosomal protein L2, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9X8_9STRA)

HSP 1 Score: 260 bits (665), Expect = 5.740e-85
Identity = 130/180 (72.22%), Postives = 147/180 (81.67%), Query Frame = 0 
Query:    4 IHPVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSR 183
            I P  LK G+ ILSG  VP+ IGN+LPLENIPLGT +HNIE+SY KGGQI          VRAAGT+AR+LAKE NYVT++LPSKEIR+++K+ YATIG+VSN+D  +I+LGKAGRKRWLG RPTVRGSVMNPCDHPHGGGEGRA IGR K YTPWGK  LG KTRKK KYSD YIVRSR
Sbjct:  105 ICPDSLKRGDIILSGTNVPISIGNALPLENIPLGTYIHNIEISYQKGGQI----------VRAAGTYARILAKEGNYVTVKLPSKEIRVINKTNYATIGVVSNKDFYSIRLGKAGRKRWLGFRPTVRGSVMNPCDHPHGGGEGRAPIGRTKPYTPWGKITLGKKTRKKYKYSDGYIVRSR 274
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: B2XTF2_HETAK (50S ribosomal protein L2, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTF2_HETAK)

HSP 1 Score: 257 bits (656), Expect = 1.330e-83
Identity = 126/180 (70.00%), Postives = 143/180 (79.44%), Query Frame = 0 
Query:    4 IHPVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSR 183
            +HP  LKIG+TI++G    ++IGN+LPLE IPLGT +HNIEL   KGGQI          VR AGT AR+LAKE++Y+TLRLPSKEIRLVHKSCYATIG +SN DH NIKLGKAGRKRWLG RP VRGSVMNPCDHPHGGGEGR  IGR +  TPWGK ALG+KTRK  KYSDI+I+R R
Sbjct:  105 LHPQSLKIGDTIMAGKEASIQIGNALPLEYIPLGTEIHNIELHPQKGGQI----------VRCAGTSARILAKESDYITLRLPSKEIRLVHKSCYATIGQLSNSDHANIKLGKAGRKRWLGRRPAVRGSVMNPCDHPHGGGEGRCPIGRARPVTPWGKPALGMKTRKNKKYSDIFIIRRR 274
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BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: B7T1Y1_VAULI (50S ribosomal protein L2, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1Y1_VAULI)

HSP 1 Score: 255 bits (652), Expect = 5.400e-83
Identity = 128/178 (71.91%), Postives = 144/178 (80.90%), Query Frame = 0 
Query:    6 PVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSR 183
            P  L +G+ I SG  +  +IGNSLPL  IPLGT +HNIELS NKGGQI          VRAAG+FAR+LAK++ Y+TLRLPSKEIRL+  SCYATIGI+SNRD  N+ LGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRA IGR K YTPWGK+ALG KTRKK KYSDI+I+RSR
Sbjct:  107 PDKLIVGSYIESGENIKSQIGNSLPLAYIPLGTFIHNIELSPNKGGQI----------VRAAGSFARILAKDDKYITLRLPSKEIRLIQSSCYATIGIISNRDAANVVLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAPIGRVKPYTPWGKSALGTKTRKKNKYSDIFILRSR 274
[Close]
BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Match: A0A516ZA15_9STRA (50S ribosomal protein L2, chloroplastic n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A516ZA15_9STRA)

HSP 1 Score: 253 bits (647), Expect = 3.200e-82
Identity = 123/175 (70.29%), Postives = 141/175 (80.57%), Query Frame = 0 
Query:    9 LKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKGGQIXXXXXXXXXXVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYATIGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKIGRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSR 183
            +K+G T++SGP   ++IGNSLPLENIPLG  VHN+EL  N GGQI          VRAAGT A++LAKE  YVTLRLPSKEIRL+ K CYATIG+VSN +H+NI +GKAG+KRWLGIRPTVRG VMNPCDHPHGGGEGR+ IGR +  TPWGKAALGVKTRK+ K SDIYIVR R
Sbjct:  111 IKVGTTLMSGPDAEIQIGNSLPLENIPLGLEVHNVELIPNNGGQI----------VRAAGTSAKILAKEGKYVTLRLPSKEIRLIRKECYATIGVVSNGEHSNITIGKAGKKRWLGIRPTVRGVVMNPCDHPHGGGEGRSPIGRKRPITPWGKAALGVKTRKRRKASDIYIVRRR 275
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56578.13187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JXT5_9PHAE1.660e-11089.94Ribosomal protein L2 n=1 Tax=Protohalopteris sp. T... [more]
D1GJS9_FUCVE4.070e-10485.0850S ribosomal protein L2, chloroplastic n=3 Tax=Fu... [more]
A0A141BSN8_9PHAE5.780e-10483.9850S ribosomal protein L2, chloroplastic n=13 Tax=S... [more]
D1J749_ECTSI3.160e-10181.6750S ribosomal protein L2, chloroplastic n=39 Tax=P... [more]
A0A2I4Q342_9PHAE1.490e-9980.5650S ribosomal protein L2, chloroplastic n=2 Tax=Eu... [more]
A0A8E5F969_9PHAE3.570e-9074.30Ribosomal protein L2 n=1 Tax=Phaeophyceae sp. TaxI... [more]
A0A7S6U9X8_9STRA5.740e-8572.2250S ribosomal protein L2, chloroplastic n=1 Tax=Sc... [more]
B2XTF2_HETAK1.330e-8370.0050S ribosomal protein L2, chloroplastic n=2 Tax=He... [more]
B7T1Y1_VAULI5.400e-8371.9150S ribosomal protein L2, chloroplastic n=1 Tax=Va... [more]
A0A516ZA15_9STRA3.200e-8270.2950S ribosomal protein L2, chloroplastic n=1 Tax=Fl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 23..162
e-value: 3.8E-81
score: 285.6
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 25..160
e-value: 1.1E-52
score: 177.5
IPR005880Ribosomal protein L2, bacterial/organellar-typeTIGRFAMTIGR01171TIGR01171coord: 53..183
e-value: 6.0E-63
score: 210.7
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 53..105
e-value: 8.0E-21
score: 75.6
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 17..52
e-value: 2.4E-9
score: 38.9
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10coord: 106..184
e-value: 3.8E-36
score: 125.1
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 4..182
NoneNo IPR availablePANTHERPTHR13691:SF539S RIBOSOMAL PROTEIN L2, MITOCHONDRIALcoord: 4..182
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 127..138
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 25..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56578contigH-paniculata_contig56578:438..992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56578.13187.1mRNA_H-paniculata_contig56578.13187.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56578 438..992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56578.13187.1 ID=prot_H-paniculata_contig56578.13187.1|Name=mRNA_H-paniculata_contig56578.13187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MNNIHPVYLKIGNTILSGPAVPLEIGNSLPLENIPLGTSVHNIELSYNKG
GQIELSYNKGGQIVRAAGTFARVLAKENNYVTLRLPSKEIRLVHKSCYAT
IGIVSNRDHNNIKLGKAGRKRWLGIRPTVRGSVMNPCDHPHGGGEGRAKI
GRPKAYTPWGKAALGVKTRKKAKYSDIYIVRSRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022669Ribosomal_L2_C
IPR005880Ribosomal_L2_bac/org-type
IPR014722Rib_L2_dom2
IPR014726Ribosomal_L2_dom3
IPR002171Ribosomal_L2
IPR022671Ribosomal_L2_CS
IPR008991Translation_prot_SH3-like_sf