mRNA_H-paniculata_contig5653.13183.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5653.13183.1
Unique NamemRNA_H-paniculata_contig5653.13183.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 3.930e-51
Identity = 103/141 (73.05%), Postives = 114/141 (80.85%), Query Frame = 3 
Query:   33 RDELFGGKRDVETGGMGGVPPAEAKLDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDGEPPEPTS 455
            RDELFGG+RDVE+G   G   AEAKL EAD  QDKTE AYKNMIGVLQETE TA  TA EL NQREQ+ RITED  EIDSLLTRADRLVKVFSKRMMTDKFIQ FGCLNVSA++AII+YVV++ V LP   DD + P+P +
Sbjct:  101 RDELFGGRRDVESGEAQGKS-AEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGG-DDNDVPDPAA 239
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.330e-28
Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 3 
Query:   87 VPPAEAKLDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDGEPPEPTST 458
            V  A+ KLD+A+ +Q+KTE  YKN+I VL++TE+    TA  L  QR QI  ITE+ +E+D +LTRA++L+ VFS+R+ TDK IQ F  +NV+AL+AII+YVVIKNVGLP S+        T+T
Sbjct:  114 VKTADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDKMIQCFAFINVAALVAIIVYVVIKNVGLPGSSXXXXXXXXTTT 237
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A835Z325_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z325_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.240e-25
Identity = 69/144 (47.92%), Postives = 86/144 (59.72%), Query Frame = 3 
Query:   18 GMQGRRDELFGGKRDVETGGMGGVPPAEAKLDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDGEPPEP 449
            G +  R  LF G R +E       P A+AKLD+A  +QDKTE  YKNM+ VL +TE+     A  L +QR Q+  I ED   +   LTRA +L+ VF KR+ TDKFIQ FG +NV+ L+ IILYVVI   GL SS     PP P
Sbjct:   97 GREAERAALFDG-RAIEM-----APAADAKLDQASAIQDKTEARYKNMVTVLAQTEEIGTAAAASLADQRTQMVAIDEDVKVMHENLTRAGKLLHVFGKRLATDKFIQCFGFVNVALLVGIILYVVITKTGLSSSGASNPPPTP 234
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A7S2V573_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V573_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.320e-17
Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 3 
Query:   33 RDELFGGKRDVETGGMGGVP--PAEAKLDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDGEPPEPTS 455
            ++ L  G +    GG  G    P +A L +A+ +QD  E+AY      L E  Q A  T  EL NQRE+I  ITE A  ID LLTRADRL++ F +RM TD+ IQVF  +N   LLA+I+Y ++ +  L +     + P+P S
Sbjct:   93 KEHLMRGAQQRRGGGGFGDSDDPNDAMLGKAEKLQDDIEDAYGRAENDLDEIRQLAPETLAELRNQREKIQDITETAERIDDLLTRADRLLRTFGRRMATDRLIQVFFFINACLLLAVIIYAIVSDSNL-TGGSGSKAPDPNS 234
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A7S2FIE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FIE2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.300e-14
Identity = 47/132 (35.61%), Postives = 80/132 (60.61%), Query Frame = 3 
Query:   39 ELFGGKRDVETGGMGGVPPAEAKLDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDG 434
            EL GG  D   GG   +   ++ L +   +QD+TE + +N I +++   + A  T  EL  Q++QI  ITE  + ++  +  AD+L++ FSKRMMTDK IQ+F  +N+ AL+ +I++ +++  G+  + DDG
Sbjct:   99 ELLGGASD---GGQVRMDN-DSYLAKTHQIQDQTEASLQNTIEMMENANEVADETISELDRQKQQINEITEQLLTMEDNIKYADQLIRDFSKRMMTDKCIQIFAMMNMLALVVVIVFAIMQKNGMLENGDDG 226
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: W7TW41_9STRA (Soluble nsf attachment protein receptor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW41_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.780e-13
Identity = 48/144 (33.33%), Postives = 82/144 (56.94%), Query Frame = 3 
Query:   24 QGRRDELFGGKRDVE-TGGMGGVPPAEAKLDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDGEPPEPT 452
            +  +  LF G +  + +G +      +  L EA  +QDKTE + ++ +G+++ ++Q    T +E+  Q+EQI  IT+    ++  LTRAD+L++ F +R+ TDKFIQ F  LN   L+ II++  +K  G   + +   PP PT
Sbjct:   95 EANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKK-GKVRAPEIHAPPMPT 237
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: F0YJK0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJK0_AURAN)

HSP 1 Score: 77.4 bits (189), Expect = 5.100e-12
Identity = 44/128 (34.38%), Postives = 72/128 (56.25%), Query Frame = 3 
Query:   84 GVPPAEAK-------LDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDGEPPE 446
            G PPA +        LD+A  +QD+T++A    + +++ + +       EL  Q+EQ   IT D + I+  LTRAD+L++ F+KRMMTDK I  F  +N+  L+ I++Y V+   GL +     + P+
Sbjct:  144 GAPPAHSDFKGNANYLDDAGKIQDQTQDALSRTMHLVEASSEVGHSALNELERQQEQARDITTDVMIIEDNLTRADKLIRNFTKRMMTDKLIVCFAFVNMCGLIGIVVYCVVTGRGLGTEGQKEDRPD 271
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A7S2W424_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W424_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.100e-11
Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 3 
Query:  108 LDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPS--SNDDGEPPEPTST 458
            LD+   +Q  T+ +    + VL +TE  A  T  EL  QR+QI +I  D   +   L RAD L+++F KRMM+DK  Q+   LN+  L+ +I++ + KN GL +  S++ G P +  +T
Sbjct:    6 LDKTQAIQSDTKASLNRTLNVLDDTEDVAQNTLGELGRQRDQISQIQGDVENVRDALRRADVLLRMFRKRMMSDKLFQMLAVLNLLFLVGVIVFAIYKNGGLGADKSSNKGSPGDDDAT 124
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.380e-11
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 3 
Query:  108 LDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVI--KNVGLPSSNDDGEPPE 446
            LD+A  +QDKTE   +    +++ +++    T  EL  Q++QI  ++ D + I+  L+RADRL++ F+KRMMTDK I  F  LN+ AL  II+Y V+  K +G     D  E P+
Sbjct:  177 LDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDKLIMGFAFLNMCALTGIIVYCVVTGKVLGDDKKKDKEEGPD 291
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BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Match: A0A485L062_9STRA (Aste57867_13425 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L062_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.290e-10
Identity = 48/153 (31.37%), Postives = 82/153 (53.59%), Query Frame = 3 
Query:   39 ELFGGKRDVETGGMGGVPPAEAK---------LDEADHVQDKTEEAYKNMIGVLQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRMMTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSN-----DDGEPPEPTS 455
            E+   K + E  G+ G   A+A          L++A  +Q KTE + KN   +++ +++ A  T E L  QR Q+  ITE+ + +D  +TRA++L++ F++RM TD+ I  F  L  + +L II+Y  +     P+ N     D  +PP+P +
Sbjct:   87 EVKWAKSETERNGLFGDAKAKASTAPTGNADMLNKAQELQTKTESSLKNTQKMIESSKEVALATGETLREQRNQLNAITEEVMRMDDGITRANKLMRTFTRRMATDRLILFFTFLVFAGILGIIIYSKVN----PNQNTFYVPDQVKPPDPNA 235
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5653.13183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE3.930e-5173.05t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z1V1_9STRA3.330e-2852.42Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A835Z325_9STRA4.240e-2547.92Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V573_9STRA3.320e-1741.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FIE2_9STRA6.300e-1435.61Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7TW41_9STRA3.780e-1333.33Soluble nsf attachment protein receptor n=2 Tax=Mo... [more]
F0YJK0_AURAN5.100e-1234.38Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2W424_9STRA1.100e-1136.13Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4A3K9_9STRA2.380e-1139.13Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A485L062_9STRA3.290e-1031.37Aste57867_13425 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5653contigH-paniculata_contig5653:3935..12739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score99.0
Seed ortholog evalue2e-18
Seed eggNOG ortholog35128.Thaps4535
Hectar predicted targeting categoryother localisation
EggNOG OGs29I5R@1,2RRCR@2759,2XCW0@2836
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-20_002310.1
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons3
Model size1826
Cds size441
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5653.13183.1prot_H-paniculata_contig5653.13183.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5653 5300..12719 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930603.4009175-UTR-H-paniculata_contig5653:3934..52991622930603.4009175-UTR-H-paniculata_contig5653:3934..5299Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5653 3935..5299 -
1691481367.9305975-UTR-H-paniculata_contig5653:3934..52991691481367.9305975-UTR-H-paniculata_contig5653:3934..5299Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5653 3935..5299 -
1622930603.4627738-UTR-H-paniculata_contig5653:12719..127391622930603.4627738-UTR-H-paniculata_contig5653:12719..12739Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5653 12720..12739 -
1691481367.9691439-UTR-H-paniculata_contig5653:12719..127391691481367.9691439-UTR-H-paniculata_contig5653:12719..12739Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5653 12720..12739 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930603.4156804-CDS-H-paniculata_contig5653:5299..54281622930603.4156804-CDS-H-paniculata_contig5653:5299..5428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5653 5300..5428 -
1691481367.9425998-CDS-H-paniculata_contig5653:5299..54281691481367.9425998-CDS-H-paniculata_contig5653:5299..5428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5653 5300..5428 -
1622930603.4294608-CDS-H-paniculata_contig5653:8536..87131622930603.4294608-CDS-H-paniculata_contig5653:8536..8713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5653 8537..8713 -
1691481367.9521737-CDS-H-paniculata_contig5653:8536..87131691481367.9521737-CDS-H-paniculata_contig5653:8536..8713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5653 8537..8713 -
1622930603.4446692-CDS-H-paniculata_contig5653:12584..127191622930603.4446692-CDS-H-paniculata_contig5653:12584..12719Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5653 12585..12719 -
1691481367.9613802-CDS-H-paniculata_contig5653:12584..127191691481367.9613802-CDS-H-paniculata_contig5653:12584..12719Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5653 12585..12719 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5653.13183.1

>prot_H-paniculata_contig5653.13183.1 ID=prot_H-paniculata_contig5653.13183.1|Name=mRNA_H-paniculata_contig5653.13183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MQGRRDELFGGKRDVETGGMGGVPPAEAKLDEADHVQDKTEEAYKNMIGV
LQETEQTAGVTAEELVNQREQIGRITEDAIEIDSLLTRADRLVKVFSKRM
MTDKFIQVFGCLNVSALLAIILYVVIKNVGLPSSNDDGEPPEPTST*
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mRNA from alignment at H-paniculata_contig5653:3935..12739-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5653.13183.1 ID=mRNA_H-paniculata_contig5653.13183.1|Name=mRNA_H-paniculata_contig5653.13183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8805bp|location=Sequence derived from alignment at H-paniculata_contig5653:3935..12739- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCGTTACCGACTGTAGGAATGCAGGGCAGGAGAGACGAGCTCTTTGGT
GGAAAAAGAGACGTGGAGACAGGAGGGATGGGTGGGGTGCCACCGGCCGA
AGCGAAGCTAGACGAAGCGGACCACGTCCAGGACAAAACAGAGGAGGCCT
ACAAGGTGCGTAAATATATATGTGTACTTTGCCCGATCCCTGATCTCTCC
GACCCGCAGTAGAGCGAGGTGACTTGCCGCAGCACGGGACCTGAGACCCT
CCATAAGAATTTTTTGCCATTTACTTTTAACTAAAAGGGAATACTGCAGT
CGCTAACGGTGGAACATGCCTCCTCCCGGAGTAGTGGTGTGTGAGGTGTT
TTGATCTACTACATAGTATGTGTTTACGTACTACAGTAGTCTGGCCTTTT
TTTTCTTGTACGACAGATGAGCAGATTTATCCACAAAAACAGCAGCGCGT
CCTACCTGCTACTTTAGGTATATGCAACTGTTCCTGTGATTCACAAACAA
GAATTCGCGGACTATGGCCACCCTGGGATACCTCCTTGAACAAAAGGACA
TCGAAAACACAAACTCGGTTCTAAGTCGTCGGGGGGAGACACATAAGTTT
AAGACATGGGTTGGGCAAATTGGGAGGAAGAGAGAAGGGGTTGGTTGGGG
TACGTGGGGGGAGCGTACGCGAGGCGCTCGTCAACTTCGGTGTTACGCTA
TCATCACAGTCTCTCCGTCGTCGAAGCTGCTCGTTTTCCACGTACATGCG
TCGTCATCCTTTTAAGTCCTCTCAACCATTGGCCCCACACGCAGCCACAT
GAGAATCACAGCAATTGTGAAATGTCGCGGCTCCCTACAAAACTAATGAC
GTACGTATGGAACATTCCCCACGCCAAAACTGGAGGGGGGGAAAGGAGGG
GCGGTTGGTCGGTGTACATGGAAGAAAGCGTACGCAAGGTGCTCGTCAAC
TTCGCTCTATTACTATCACAGCTCTTCCGTCCTCGAAGCTACTCGTCGCC
TTCCATGTACATGCACCCTCATCTCACTGCCCTAGTTCGTGCATTGCTCA
TCGCCGTCGCTTCTCCGCCCGTGTAAGTTCTGTCACCTTCGCTCATTAGC
ACCTGACAAAGTGACTTCTTATACGCGCACTCCCGGTACACGCCTTGAAA
TTTCTCGCGTGGTGGGGCGAGCACTCCACCCCTCGTCGACGACCGCCCGT
CACGCCACTTCGTCGAATTCACCTAGTCACAACTCGGTGGACTATGCCCT
CTCCAGAGCACAGATGATTCACTGCTTAGCGATCCCGTATTCTGGGGCAC
ATTGTACGCCTGGTATCCTCGTACGTCTTCTGTGGACATCGCCGCATGTA
GCAAACCGCTGGCGTGGCGAATTTTTCGAATAGAAGAGGTCAGGGGAAAC
TTGGACCAAGCCAGCACTACCTCGACCACACCCATCTACTTGTCACATTC
AGTTGGGTCTGAAATAAGGAGAATAGGTCGATCGATCCATCGGCAGGCTT
GGGGTTAAGGTCAGGTGCTCGAGTGTTGCCTTGGGGAACTTCTATTGTAT
GATCGCGGGTCTGCGTGATCGGGCTAGAGTGTTGAATACTAATTACAGTA
ATATATAGCACTGAGAGAAAAGAGGAGGAGTTTAGATAATGATGATAAAA
ATCACGAATGTGTTGTCGTTATAAGTCCGAGTGCTCAGACTCGAGTCGCG
ATTGATTCGAGGGTCTAGAAGTTTTGTCTGCATCATGATTATCGTCGTTG
TTTAGATTGGGTCGAAAAGGAAAGCGCTTAACCCTTTTGGGACTGCAGCG
CCACAAATCTGTGAAAGAAAATCTATACCACTGTGGTGGCCACCTGAGGA
AAACACCTTGAAATGGGCAGTGATCACCCAACGTACGTCCAGGACAGTTA
GCCTCATTTTCACATTGGCGACGCCGATAGATACCTTGTCTGCTTCTGGC
CCTTACGGTCATGAGTTCGAACCACACGAACAAGTTAAGTGCTCAACACG
AAACTCCCGACTACGGTGGGGGAACGAAAGCAACAACTTTAGAACTCATG
TGAAGAAAAGAGATTGTAACACCTAGCCGCCAGCCGGTCTAGTTCTGGTT
ATTCGTAAATTGAAATCTTCCAAAGGAAGACTCGAAGAAAAGGGGAGGAT
AATGTGGTGGCCACCTGAGGTAAGCACCTTGAAAGGGGTAATAATCACCT
ATAACGTACGTCGAGGACATGTACCCTCATTTTCACACTTGAGACGTTTT
TTTTGGCGGGGTGACCAAGGGGACTTGGAAAAATACCGATCGAGTGTGAA
GAATTCGATAAAAGAAACAAACAAGAGTTTCATCACGATTTTTTTTGTAT
CAATTAGGAGTGGAGGTCATTATCCGTACAGATGTACACTTGGTAAGGTG
GTGTGCAGGCTTTAGGGGTCTGCGGGGAATCCCGCGAAAATCTGCCCGAT
TTTGACTGTGGAGCTATCGATTAGGGAAAATCTGTGCTGGTGACATGACA
CCCTTTGTGTGCCAGCAATATCAGTTTTGATGCTCGTTATCTCCTTTCAC
AGTGCTAAACAGGTGACGCGTTCTCGAACAAAGCATGGCACTTTGCAGGT
CTTTCGAACGCTCCCCATGCTGATATGTCAATCTCGCTGGATGTCGAGTT
CGACGTTCGTGGCAGTGGTGAACAACAGCTGCAGCTTTTGTCGGAGATAA
TTGCAGATTTTCATGTCCATACGAGCCTTCGTTTCCTTATTATCCATTGT
GTGTGTGTTTTTTTTGTGTAGATAAGATGGCGTTCCGAAATGATACCTAA
TCCCGAAGGGGTTTAGGTGTGAGGTGTGAGGTGTGGCGTCGAATTTCCCC
CACATTTTGTGCTAATCCACACGGGTCGTGGTGCGCTCCAGTGGCGTCCG
TCCTTCTTGTTTGTTGCGTTCACCACCCCGGGCTCGAGAATAGAGTACAT
CTGATTCAAATCGCTCGGGATAAGGCCCGCTCTCTCTGTTCTCTGCCTTT
TTGAGGTGGTGTGTTGCGTTCGTGTTAATACTCATGTAGAGGGTCAGATC
TGGCACCCCAATCCCTTGCCCCCCCTGGCTCTAAACAGTCGTAGTCTCTA
GGACTGTCGAATGAGTATGCAATATTTGGTTACGTGGGGTGCCCATGACC
TTACGGTAAAATCCGGTTGGGGTAACAACACCAACATGGTGACGAGGTAA
TGGGTAGTACAACCCTTGTACAACACACACTGACCGGCGATAACTCGGCA
TGCTTCGTCCCGGTATTGTATGTATGCGAGGTCAGTGGTTGAAAGACCAG
GAAATGCGTTTTCACGAGTTTTCCTCCATCCCTGAGCAACTTAACGCTCC
TGATCCCCTCAAAATGCCGGAGACAGTCAGTTCCGTGTAGATATTGCAAC
CGTCAGTTGTGTCTGAGACATACCGGAGCTTGTAGTTGACCTGGGAGGGG
TACAAGGGCCGGGGGTTGATTCCCCAAACCAACTGATCAACGGGTATTGA
TGTTGAGCTAGCCTTCTCGTTTCTCACTGTTGTTTGTTGTCTTGGGTTGT
GATGTCTGTAAGTGTGTGTGCCGAAACCCAGCAGCCTTTTTCCGATGGTG
GTACCTGTTTGCGCTGTGTGTATTCATGTATGTGTGTATGTTTTCACGAA
TATGTAACGGTTTCACTCTTTCGACGCGCGTGTGCCCAAGTATCTTGTTT
GTCTCTCCGTCCGCTAATGAAGGAAGAAAACGGATCGAAATTTACTCACC
AACCACACAGATGCATTTTGATGGCACCCAAGATGCACCATGCAGGGAGC
GACAATCTACGGTAGCATACAGTAGTATAGACAGTGTAAGTATGGTGCCA
TGGTGTAATGGAGCGAGAAATCCGAATTTTCATGTTTGGCTCTGTAAATG
GAAAAAGAAGATAGACACAAGGGACAAGGGGATTTAATCTAGCGTACCCC
CCACCTCCTCCATCCGCCCCACACCCGTCGCCTGCCCTCGCCGTCTTTTG
GACGACATAATGACAACGGAGACTAGAACATGATCGGAGTGCTCCAGGAG
ACAGAACAGACGGCGGGTGTCACAGCGGAGGAACTGGTGAATCAGCGCGA
ACAAATTGGACGTATCACAGAAGACGCGATCGAGATAGACAGCTTGTTGA
CCCGAGCGGACCGGCTGGTGAAGGTTTTCTCGAAGAGAATGATGACCGAT
AAGGTAAGATATTAAGGTGACAGGACTCTTTTTTTTTTTTTCCATGTGAC
ATAGGTTCTTCCTGTATAAGGGGGTAGAGTAGGGTCAACATGGTTCTTGA
GACAACGTACATAGCTCTTTGTGTTTAGTGTCATTGAATCCTCTTCCCGC
ATATAAATAACTCCATATTACGAACGAAACGTATATTTAACCCTTTCTGC
GCCTTTTTCAAAAGAGGCTATTTCGGATCACAGGTGACATTTGAACTGCA
GATGTTGAGCGTTGCGGTCGTTGGAGGGGGCAGTAACCATGTGTATTGCC
TATCTGTGCTATATGTAGCGTAGTACCTTACTGGGCTGTCTGTCTGAACA
GGGAGACGGCTATTTATATCAACCGTAATTCTGTGGTATCGCAGACGTTC
TTTCCCCATTTTTTTGACGTGAGGATGACACAGACATCAGATGGAAACCG
GTGCTAGAAGAGTTAAGGCTGTCTGTTACCGTCTATTTTTCCGCCAATGG
AGTTGTACTAAGTGCGTGTTGTGCGGCCTTATATTTGTGTACTCGACGTT
TGTTTTTCAGCTATCGAGGTTCACATGTTGACTGCTTGTCTGTTCGGTAA
CTTTATACCGGTGAAATTGTTTGCATGCACATGATAGCTATATTAATAAT
ACTCGCATTGCAAACAACATCGTCCATTCCGTCGGAACGTTGGCTGAAGG
AAAACAAAGTCCACGCTAAATACGGCAAATATGTGGGCTATTCATGTTTT
TACGGAATAAGCAAAGAAATAACCCAGTATATTTGTCGTCGTGTTCTCTT
CAGGCTTCTTCCCGATATGCTGTTTATGTTTTTCGCATATTTATACTCCC
TCCGTCCCATAAGTCTGCGGCGTTAAGAGCGTAACTTGTTGCAATGACTT
CCGAATCAAAACATTTTTTTTGCGTCGGATTCCTTGGTGTTCTTCACGTT
AATTTAATTATTCGCAGCTTTCCTGGTTCCCATCAATCCACCATTCTACC
CCCCGCGTCGAAAGCCTCTCCGTCGATTTTAACCGATTTTGGCAGATTTC
CCACACGCTGCCTTTTCTTGGTTTCGGTATGCTGTACCTCGAAATCGTTA
CCTCCTAGCGCCTTCAAGACCTGATTATACAGCTTAAAGAGGCTTTGCTA
CATCCTCTCTAAGGTTGCCGCGTCGTACGCATCGTACATGCTCTTGATCC
CCTCCACAAGGCCGTCTATCGCACTATAACGCTCCGTCCAAACTCTACTT
CTCAGAGATGCAAAGAACCCCAAATCGTTGATGTTGAGATCTGGTGACTG
CGCAGGCTGAGTTACGAGATTGACGTTCCACCCCCCTTCCCTCCCGAGTT
CGTTGAGCTTCCGCGGCGTGTCTTTCCCCGTGTGTGGGGTCGCTCCGTCT
TGCTGCGCGACCACTTCCTCACCCTCAAACCACGGCATATTTTCCTTCAA
TGCTGGCAGAAAAGAGTCCTTGTACCACTCCTGGTACCACTCAGCGTCAG
TGGTCACGTCGAACTCGTATTACTACCCCCGTTCATGCCGGGCCGAATTC
CTCTGCGCCTGCTTGATGACGCAAACACGCCAGATTCTAATCTTGCTGTC
GAAATCGCGGGAAGGATCTGGACACGAAACGGTGCAGATGAACATCACCT
TAGGAATGTGACTCTTTTGCTGTACTTTGGTGGGCCCCATCCTTTCCTCT
ACGGGGGACATGAGGATGCGATCCCTGTCGCGAATTAGGTAAAAACCACG
CTTGGTTGATGTGAAATGTTTGGAAGCCGCTCCTGAAAGTGAGGCGGTTC
CTTGCTACTTGGTCCAAGATGAAGTCTATCCGACTCTTTGGGTGCGTCAG
CGACAGAGATGGGGTAATGCACCGTTTCACCCTCGTGGCGCCCATCTATT
TGAGCCATCGCTGAAGCTTTGAGCTGCCCGCTACGAGACCAATTTCGGCT
AGCTTGGTAGACAGTTGGTCGAGGGTCAGGGTTCGATTCGTGGCGTTGAT
CCTTGGAATCGTGACGTGCTTTGTCGGTGTGAAGTCCGACGACCGCCCGC
TTCGTGACGCTGACCTCATCAAAAGGGTATTGCCATGGTCCAGTTGTTCT
CGTACACGCGCCCAAAGTTGTCTGGGATATTGCTCGCCAACTCCAAACTG
CTCCACCAACTCTGGCCTAACGCCTTTCGGAAGCCATTTCTTACCGGGAG
GTGGCCCTATTGCGTACCAACGCATTTCGACCTTCCTCGCTCAGCTTGCA
ATTTTCACCCCAGGCTAATGGGCTCTCGGCATAAGATGCTGGACTCGCCA
GAGTGGTAATGTTGGTTGCGAAATTCGCGTCGCAGACGGTGTGGAAGCTG
CACGAGAGTCGTACAGCTCATGGCCAGGTGCTGAGATGTTGTGTGACGAT
AGGGGGAGCGCTTTGTCCGTCGCCGGGCGCAGCGCAGCCACTCAAAATGG
AGCCGAAAAGGGTTATTTTTGCGTTCCCTTTCCTCTCGCGTTTTTTTTCG
GAATTATTTCGGAACAGTATGCGAGAACGGAATAATTATTCTGAAATTTT
ATGTCCATATCTCTAATTCAAGCCATACGTGACCGTAAACCTCTTCGTAT
TCGTAGAGAAACGGCCTACATAAGAAATGAGAAAGCATAACGTCGCAGAC
CTCTTGGACGGAGGGAGTAGAAATACTAGAATTCTCGTACCTGGAGATCC
ACGGCATGCGACTGTTTGTAATGTATGGGTGCACACACATCTACGTTTGA
CATCCGCAACGGGTATGTTCGATGAAAACATGCGGACGGCGCGTACATGA
CGCGTATTTCGTCGTTAATCGCATATTTTTGCGCATATAATGTCGTTGAG
TCGCATATTTGGGGCATATTTATCAGAAATTCGCATAAAGTGGCACATAT
TTCCGCTTTTCGAACATATGCTCGCGAAAAAAAAAAACGCGCACATCTTT
TTTTCATTTTTATCGCATATAGAGGAGAGGCCTAGTTCTCTCCCTTTTCA
CTGTAAATTTGAAAAGAGCATGAATCTGTCGCGCTTAATTCGTCCCGTCC
CGTCCTCCTCCGCTTGTCATGGCGCGCGTTGTTGGGCTGTGATTTGTTTG
TTCGTGTGCAGTTTATCCAAGTGTTCGGGTGCTTAAATGTATCGGCGTTG
TTAGCCATCATCCTCTATGTGGTTATCAAGAACGTTGGCCTGCCAAGCAG
CAACGACGACGGCGAGCCGCCGGAACCGACTTCGACGTGATTCGTTTTTT
TTTTTTTTTTTTTTCCTTACTCTTCGTTTTGAAGCCTTCCTTCCCCCCGT
CCCCCCGAGAAAGGGTTCGAACCAGTCATAATGCGATTGTTAATTGTAGG
CTCACTTTTCCGTTTTGTGAGTGGTAATAAATCTGCGATACAAAAACAGT
GTATCGGAGTTAGTTGCCTGAACGTTGTTCATTTTGTTTTTTCGTTTTCT
TCGTCTGTCGGAGTTTGGTTTGGTTTTTTGTCCAATTCGTGCGTAGTAGC
ACGATGTTGGTCACCACGGCACCCAAGTGTTTTGTTGATGGATTGCGATG
TGCCCTCATTTTTAGTCAGGAAATACAGTAAGTGCACATGTTCTATTGAC
TATATACATGAACAGTATTCAGTAAAATTTGTCTCTCCCGCTCCAGTACG
CAAATTGTATTACATGATGATTTTGCGGCATTTGCGACGTGAAGATTTTT
GACGCATTTGGGAGAGCTTCGTGGCGCTTTGTCCGAAAATATTGTTCTCA
TCTCGTCGTTTCCAGATGTCCCGATAGCCATTGCGTGCGCCAGGCTGGCG
GATTAGATCGAAGTTTATCGTGGTACATATGGTATGTTGTAGAAGTAATG
TGTCAGATTGTTCGTTTTTTTGCTGCTAGGCTCTTACAGTAGTACTGTCG
GCCATGAATCGAGCATCACGTTTATTCGGATAGATTCGACAAATGCACGA
ATGCCCAACTGGTGAGAGAAGGAGAGAGCTGTGACGTCGTGTTGGGTATA
TCAGGATATTGTAACTTCCTGAAGAATCGGAGCGTTCATGTTTGTGACTG
TTTAGTTTTGAAGTTAGGGATATGGAGGGAGGTGTTTGTTTCCCGCATGG
TAATAGCTTGCTTTGGAACATTGGTGAATAATGTGCCGCGATTTTGTGAA
GAGTTTACGGGGGTTTTTTTGCAGGTGGAAAAACAAACTGATTTGCCGAG
TTGCTTCTTGACAAACTCCAAGAAATGTCACAAATTTTGTCTTGAAACAT
TTTTTTTTTTTTTCTAACCTGCGAAAATCTGAACTGCGCATATATGGCGG
TACGTGGAGGGAGGATCATCAATGCAGGGGAACAAGGAGAGGAGGATTGT
CTTAGAGCTTTGTTGCCCTTTCGTGTTTTCATGGCATACATTAGTGTTCC
GTGGTTTGGACGCGTGTAAACATGGGCAAATCTTGTGCTGAGATCAGTTG
ACTCTGGAGTACTTTGCACGCCGTGACCGATGTTCGTCTGTGAGACGATT
GATGACTCCCTTTTTTTATTTCGCGCAACTTTTGGACGTGCTACCAAACG
GGTATGTATGACTCAAACTATCGCTACCGCTAACGGAACGTTTCCATGGC
TGGCG
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Coding sequence (CDS) from alignment at H-paniculata_contig5653:3935..12739-

>mRNA_H-paniculata_contig5653.13183.1 ID=mRNA_H-paniculata_contig5653.13183.1|Name=mRNA_H-paniculata_contig5653.13183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig5653:3935..12739- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGGGCAGGAGAGACGAGCTCTTTGGTGGAAAAAGAGACGTGGAGAC
AGGAGGGATGGGTGGGGTGCCACCGGCCGAAGCGAAGCTAGACGAAGCGG
ACCACGTCCAGGACAAAACAGAGGAGGCCTACAAGATGCAGGGCAGGAGA
GACGAGCTCTTTGGTGGAAAAAGAGACGTGGAGACAGGAGGGATGGGTGG
GGTGCCACCGGCCGAAGCGAAGCTAGACGAAGCGGACCACGTCCAGGACA
AAACAGAGGAGGCCTACAAGAACATGATCGGAGTGCTCCAGGAGACAGAA
CAGACGGCGGGTGTCACAGCGGAGGAACTGGTGAATCAGCGCGAACAAAT
TGGACGTATCACAGAAGACGCGATCGAGATAGACAGCTTGTTGACCCGAG
CGGACCGGCTGGTGAAGGTTTTCTCGAAGAGAATGATGACCGATAAGAAC
ATGATCGGAGTGCTCCAGGAGACAGAACAGACGGCGGGTGTCACAGCGGA
GGAACTGGTGAATCAGCGCGAACAAATTGGACGTATCACAGAAGACGCGA
TCGAGATAGACAGCTTGTTGACCCGAGCGGACCGGCTGGTGAAGGTTTTC
TCGAAGAGAATGATGACCGATAAGTTTATCCAAGTGTTCGGGTGCTTAAA
TGTATCGGCGTTGTTAGCCATCATCCTCTATGTGGTTATCAAGAACGTTG
GCCTGCCAAGCAGCAACGACGACGGCGAGCCGCCGGAACCGACTTCGACG
TGATTTATCCAAGTGTTCGGGTGCTTAAATGTATCGGCGTTGTTAGCCAT
CATCCTCTATGTGGTTATCAAGAACGTTGGCCTGCCAAGCAGCAACGACG
ACGGCGAGCCGCCGGAACCGACTTCGACGTGA
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