mRNA_H-paniculata_contig5650.13180.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5650.13180.1
Unique NamemRNA_H-paniculata_contig5650.13180.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 349 bits (896), Expect = 5.220e-116
Identity = 172/198 (86.87%), Postives = 189/198 (95.45%), Query Frame = 2 
Query:   17 SAFNGAAVTQSARSSSSMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            SAFNGAA+T SA++ S+MKM+FESEIGAQ PLGFWDPLGLL+DADQERF+RLRYVE+KHGRIAMLAIAGHLTQQNTRLPGMLS S N+SFADMPNG+AALSKIPP GLAQIF FIGFLEL VMKNVEGSFPGDFTLGGNPFG+SW+AMS ETQASKRAIELNNGRAAQMGILALMVHE+L+N+PYVINDL+GASY+FN
Sbjct:   20 SAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 9.720e-115
Identity = 171/198 (86.36%), Postives = 186/198 (93.94%), Query Frame = 2 
Query:   17 SAFNGAAVTQSARSSSSMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            SAFNGAAV  SA+SSS+MKM+FESEIGAQPPLGFWDPLGLL+DADQERF+RLRYVE+KHGRIAMLAIAGHLTQQN RLPGMLS S ++SFADMPNG+AALSKIPP GLAQIF F+GFLEL VMKNVEGSFPGDFT GGNPF SSW+AMS ETQASKRAIELNNGRAAQMGILALMVHE+L+N+PYVINDLLGA Y+FN
Sbjct:   24 SAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.100e-114
Identity = 174/197 (88.32%), Postives = 186/197 (94.42%), Query Frame = 2 
Query:   20 AFNGAAVTQSARSSSSMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            AFNGAAV   A+SSS+MKM+FESEIGAQPPLGFWDPLGLL DADQERF+RLRYVE+KHGRIAMLAIAGHLTQQNTRLPGMLS S N+SFADMPNG+AALSKIPP GLAQIF FIGFLEL VMKNVEGSFPGDFTLGGNPFGSSW+AMS ETQASKRAIELNNGRAAQMGILALMVHE+L+N+PYVINDLLGA Y+FN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 345 bits (886), Expect = 1.750e-114
Identity = 170/198 (85.86%), Postives = 185/198 (93.43%), Query Frame = 2 
Query:   17 SAFNGAAVTQSARSSSSMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            SAFNGAAV   A+SSS+MKM+FESEIGAQPPLGFWDPLGLL+DADQERF+RLRYVE+KHGRIAMLAIAGHLTQQN RLPGMLS S N+SFADMPNG+AALSKIPP GLAQIF F+GFLEL VMKNVEGSFPGDFT GGNPF SSW+AMS ETQ SKRAIELNNGRAAQMGILALMVHE+L+N+PY+INDLLGASY+FN
Sbjct:   21 SAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 342 bits (877), Expect = 3.750e-113
Identity = 172/198 (86.87%), Postives = 186/198 (93.94%), Query Frame = 2 
Query:   17 SAFNGAAVTQSARSSSSMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            SAFNGAA+T SA+SSS+MKM+FESEIGAQ PLGFWDPLGLL DADQ+ F+RLRYVE+K GRIAMLAIAGHLTQQN RLPGMLS S N+SFADMPNG+AALSKIPP GLAQIF FIGFLEL VMKNVEGSFPGDFTLGGNPF SSW+AMSAETQASKRAIELNNGRAAQMGILALMVHE+L+N+PYVINDLLGASY+FN
Sbjct:   19 SAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 341 bits (875), Expect = 6.310e-113
Identity = 168/198 (84.85%), Postives = 186/198 (93.94%), Query Frame = 2 
Query:   17 SAFNGAAVTQSARSSSSMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            SAFNGAA++  A+SSS+MKM+FESEIGAQ PLGFWDPLGLL+DADQERF+RLRYVE+KHGRIAMLAIAGHLTQQNTRLPGMLS S N+SFADMPNG+AALSKIPP GLAQIF FIGFLEL VMKNVEGSFPGDF +GGNPF SSW++MS+ETQASKRAIELNNGRAAQMGIL +MVHE+LSNQPY+ NDLLGASY+FN
Sbjct:   14 SAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 8.150e-111
Identity = 163/181 (90.06%), Postives = 173/181 (95.58%), Query Frame = 2 
Query:   68 MKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            MKM+FESEIGAQPPLGFWDPLGLL DADQERF+RLRYVE+KHGRIAMLAIAGHLTQQNTRLPGMLS S N+SFADMPNG+AALSKIPP GLAQIF FIGFLEL VMKNVEGSFPGDFTLGGNPFGSSW+AMS ETQASKRAIELNNGRAAQMGILALMVHE+L+N+PYVINDLLGA Y+FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 323 bits (828), Expect = 2.870e-106
Identity = 159/182 (87.36%), Postives = 171/182 (93.96%), Query Frame = 2 
Query:   65 SMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            +MKM+FE EIGAQ PLGFWDPLGLL+DADQERF+RLRYVE+KHGRIAMLAIAGHLTQQN RLPGMLS S N+SFADMPNG+AALSKIPP GLAQIF FIGFLEL VMKNVEGSFPGDFTLGGNPF SSW+AMS ETQ SKRAIELNNGRAAQMGILALMVHE+L+N+PYVINDLLGASY+FN
Sbjct:    1 AMKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 312 bits (800), Expect = 1.370e-101
Identity = 154/196 (78.57%), Postives = 173/196 (88.27%), Query Frame = 2 
Query:   23 FNGAAVTQSARSSSSMKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            FNGAA+  SA+SSS+MKM+FESEIGAQPP+GFWDPLGL++DADQERFDRLRYVEIKHGRIAMLA+ GH+TQQNTRLPGMLS  EN++FAD PNG+AA SKIPPLG  QI L IG  EL V+K VEGSFPGD T GGN F S+W+ MS ETQASKRAIELNNGRAAQMGILA+MVHE+LSNQPY+INDL GA+Y FN
Sbjct:   17 FNGAALATSAKSSSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212
[Close]
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Match: A0A6H5KBS3_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS3_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 1.240e-89
Identity = 140/206 (67.96%), Postives = 160/206 (77.67%), Query Frame = 2 
Query:   68 MKMAFESEIGAQPPLGFWDPLGLLSDA-------------------------DQERFDRLRYVEIKHGRIAMLAIAGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGFLELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAAQMGILALMVHEKLSNQPYVINDLLGASYSFN 610
            MKM+FESE+GAQPPLGF+DPLGLL D                          DQERFDRLRYVE+KHGRI+MLA+AGHL  QN R PG LS    ++FADMPNG+AA+SKIPPLGLAQI  FIGFLEL VMKNVEGSFPGD T+GGNPF + W+AMS ET+ SKRAIELNNGRAAQMGILA+M+HE++SNQPY+INDLL A Y+FN
Sbjct:    1 MKMSFESELGAQPPLGFFDPLGLLIDQVVPQLPPSCQSSLLVICADGLEPWEDQERFDRLRYVEVKHGRISMLAVAGHLVAQNYRFPGYLSYDAKLTFADMPNGVAAISKIPPLGLAQIVAFIGFLELNVMKNVEGSFPGDMTIGGNPFAAQWDAMSEETKLSKRAIELNNGRAAQMGILAMMIHEEISNQPYIINDLLNAPYTFN 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5650.13180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
FCPB_MACPY5.220e-11686.87Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JHT6_9PHAE9.720e-11586.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNK6_ECTSI1.100e-11488.32Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5KCX6_9PHAE1.750e-11485.86LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
FCPC_MACPY3.750e-11386.87Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
FCPF_MACPY6.310e-11384.85Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
A0A6H5JDS8_9PHAE8.150e-11190.06LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPD_MACPY2.870e-10687.36Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
FCPE_MACPY1.370e-10178.57Fucoxanthin-chlorophyll a-c binding protein E, chl... [more]
A0A6H5KBS3_9PHAE1.240e-8967.96LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5650contigH-paniculata_contig5650:8454..10318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.2
Seed ortholog evalue2.4e-90
Seed eggNOG ortholog2880.D7G1R7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S3EU@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1496
Cds size546
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5650.13180.1prot_H-paniculata_contig5650.13180.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5650 8521..9435 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930603.089827-UTR-H-paniculata_contig5650:8453..85201622930603.089827-UTR-H-paniculata_contig5650:8453..8520Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5650 8454..8520 +
1691481367.76265-UTR-H-paniculata_contig5650:8453..85201691481367.76265-UTR-H-paniculata_contig5650:8453..8520Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5650 8454..8520 +
1622930603.1302993-UTR-H-paniculata_contig5650:9435..103181622930603.1302993-UTR-H-paniculata_contig5650:9435..10318Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5650 9436..10318 +
1691481367.8152542-UTR-H-paniculata_contig5650:9435..103181691481367.8152542-UTR-H-paniculata_contig5650:9435..10318Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5650 9436..10318 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930603.1046531-CDS-H-paniculata_contig5650:8520..87071622930603.1046531-CDS-H-paniculata_contig5650:8520..8707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5650 8521..8707 +
1691481367.7827644-CDS-H-paniculata_contig5650:8520..87071691481367.7827644-CDS-H-paniculata_contig5650:8520..8707Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5650 8521..8707 +
1622930603.1179376-CDS-H-paniculata_contig5650:9076..94351622930603.1179376-CDS-H-paniculata_contig5650:9076..9435Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5650 9077..9435 +
1691481367.8033733-CDS-H-paniculata_contig5650:9076..94351691481367.8033733-CDS-H-paniculata_contig5650:9076..9435Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5650 9077..9435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5650.13180.1

>prot_H-paniculata_contig5650.13180.1 ID=prot_H-paniculata_contig5650.13180.1|Name=mRNA_H-paniculata_contig5650.13180.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp
MKMAFESEIGAQPPLGFWDPLGLLSDADQERFDRLRYVEIKHGRIAMLAI
AGHLTQQNTRLPGMLSTSENISFADMPNGLAALSKIPPLGLAQIFLFIGF
LELGVMKNVEGSFPGDFTLGGNPFGSSWEAMSAETQASKRAIELNNGRAA
QMGILALMVHEKLSNQPYVINDLLGASYSFN*
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mRNA from alignment at H-paniculata_contig5650:8454..10318+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5650.13180.1 ID=mRNA_H-paniculata_contig5650.13180.1|Name=mRNA_H-paniculata_contig5650.13180.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1865bp|location=Sequence derived from alignment at H-paniculata_contig5650:8454..10318+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATGTAAATCATATATAGCGCCTTCAACGGCGCTGCCGTGACCCAGTCTG
CCAGGTCCTCGTCCTCGATGAAGATGGCGTTTGAATCGGAGATAGGCGCG
CAGCCCCCTCTCGGCTTCTGGGACCCGCTCGGCCTCCTGTCCGATGCCGA
TCAGGAGAGGTTTGACCGCCTCCGGTACGTCGAGATCAAACACGGACGCA
TTGCTATGCTGGCCATTGCCGGGCACTTGACCCAGCAGAACACCCGCCTT
CCTGGTGAGTTACTAAATGGTTCGAGAACAATCGTTCGAGAACTCGAGAG
CTAGGTATGTAGTGTTTTTCAGTGGGTTGCATCTGTGAGTTGTGGGCGCC
GAGTGTTGTGTCGTTGTATTTCATTTGTCCTGTCATCCTCGACAAGAATG
ACTTGATTGCAGGATGCGATGATTTTTATTGAGTCGCCGACATCGAGATG
TTGTCCAGTTGCTCTGGGCTAGGCAAGGGCTCCTACTTCGAGGTAGGGGG
GTGACTGTTCTTTCTCATGTGTGCATGAATAGTTTCATGTGAAATTCTCT
CGTGAATGCAGCACCTGTGCGAATGTGTAAAACCCTTCGTCCGTGTTTAC
CTACCTTTGTGATTAAAACACAGGTATGCTCTCCACTTCGGAGAACATCT
CGTTCGCCGACATGCCCAATGGCCTGGCGGCCCTATCCAAGATCCCCCCC
CTGGGCCTGGCGCAGATATTCCTGTTCATCGGCTTCCTAGAGCTGGGTGT
GATGAAGAACGTTGAGGGCTCGTTCCCAGGAGACTTCACCTTGGGCGGCA
ACCCCTTCGGATCTTCGTGGGAGGCGATGTCGGCCGAGACCCAGGCCTCC
AAGCGCGCGATAGAACTCAACAATGGCCGCGCCGCGCAGATGGGTATCCT
GGCTTTGATGGTGCACGAGAAGCTCTCCAACCAGCCATACGTCATCAACG
ACCTTCTCGGCGCCTCGTACTCGTTCAACTAGAGCGAATAGCCACCAACG
CTCATGTTTTTGGGTGAAGATGGGTTATCTTTTATTTACTTGCTGGGCGG
ATTTGGACTGGCCAGAAGTTTGTCTGGAAGTGGTCAAGCGTTACCTTGTC
TGGAGAACATTCAGGCCGGGAGCGACAGGGCGCTGGGGAGATACTTGAGC
CATCGTGTTGAAGGATTTTGTTGTCGAGACAGTACGAGAATAGCACGTTT
TGTTGAAAGCCTTCCGAGTGACGTGGTTTTTTCGAAGTTCGTTTGGGTTC
TCGAACCGTAGATTCAGGTTCCAGTAACGCACGCGCTTTCTTTTTCGTGT
GGGCATTTTTAGTGTTGGTCTTGTTTAGATTTCCTGGCTACAACTCAAAC
TCCTTCGCGACTTCTTTTGCTTTCGCTATCGCAGTAGTGTAGAAGGAAGC
AGAGGGCGGGACGCCTTACTGTCATTGGGGAGCACCCAATGCATGTCTTT
CCGAGCTCAAGTCACTTGTGGGCTTATTTTTCTGGGTTTGGCTTGTGTTG
GGTCGATTTGAGCGAGATGACGACCCATGGAGTTGATATGAACACGCAAG
CCATGCACAATTCCTAAATGTTTGGTTCTCTACGCGTTTGGTGAGGATGA
ATCCTTCCCGTGACGGATGTCGTTGCGAGGATAACTCCCTGACCGCTGCC
CATGACTGCTATTCCTAGTGGCGGGATGATAGGTGGAGCATTACACGTCC
GGTAGTGTTTCGAGTCTCTGAGAATATGTCCGAAGGTGAATCAAATTCAA
CCTTTGTTGAGAGTTGCTCATCCTGTCACACTGCCTGAACCGGACTCCTT
CGAAATGTGAACGAGCCTGTTCAAAATTGTTCTTCTCATCGACACGCTTT
TCGCGAAATTCCCCG
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Coding sequence (CDS) from alignment at H-paniculata_contig5650:8454..10318+

>mRNA_H-paniculata_contig5650.13180.1 ID=mRNA_H-paniculata_contig5650.13180.1|Name=mRNA_H-paniculata_contig5650.13180.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1092bp|location=Sequence derived from alignment at H-paniculata_contig5650:8454..10318+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGATGGCGTTTGAATCGGAGATAGGCGCGCAGCCCCCTCTCGGCTT
CTGGGACCCGCTCGGCCTCCTGTCCGATGCCGATCAGGAGAGGTTTGACC
GCCTCCGGTACGTCGAGATCAAACACGGACGCATTGCTATGCTGGCCATT
GCCGGGCACTTGACCCAGCAGAACACCCGCCTTCCTGATGAAGATGGCGT
TTGAATCGGAGATAGGCGCGCAGCCCCCTCTCGGCTTCTGGGACCCGCTC
GGCCTCCTGTCCGATGCCGATCAGGAGAGGTTTGACCGCCTCCGGTACGT
CGAGATCAAACACGGACGCATTGCTATGCTGGCCATTGCCGGGCACTTGA
CCCAGCAGAACACCCGCCTTCCTGGTATGCTCTCCACTTCGGAGAACATC
TCGTTCGCCGACATGCCCAATGGCCTGGCGGCCCTATCCAAGATCCCCCC
CCTGGGCCTGGCGCAGATATTCCTGTTCATCGGCTTCCTAGAGCTGGGTG
TGATGAAGAACGTTGAGGGCTCGTTCCCAGGAGACTTCACCTTGGGCGGC
AACCCCTTCGGATCTTCGTGGGAGGCGATGTCGGCCGAGACCCAGGCCTC
CAAGCGCGCGATAGAACTCAACAATGGCCGCGCCGCGCAGATGGGTATCC
TGGCTTTGATGGTGCACGAGAAGCTCTCCAACCAGCCATACGTCATCAAC
GACCTTCTCGGCGCCTCGTACTCGTTCAACTAGGTATGCTCTCCACTTCG
GAGAACATCTCGTTCGCCGACATGCCCAATGGCCTGGCGGCCCTATCCAA
GATCCCCCCCCTGGGCCTGGCGCAGATATTCCTGTTCATCGGCTTCCTAG
AGCTGGGTGTGATGAAGAACGTTGAGGGCTCGTTCCCAGGAGACTTCACC
TTGGGCGGCAACCCCTTCGGATCTTCGTGGGAGGCGATGTCGGCCGAGAC
CCAGGCCTCCAAGCGCGCGATAGAACTCAACAATGGCCGCGCCGCGCAGA
TGGGTATCCTGGCTTTGATGGTGCACGAGAAGCTCTCCAACCAGCCATAC
GTCATCAACGACCTTCTCGGCGCCTCGTACTCGTTCAACTAG
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