prot_H-paniculata_contig5645.13177.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5645.13177.1
Unique Nameprot_H-paniculata_contig5645.13177.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length879
Homology
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 1.260e-87
Identity = 174/267 (65.17%), Postives = 198/267 (74.16%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTRN-LPPPRVPRLP-CNSSKPAVAGRLWSSASSTPTAGVPAAAVGT 268
            QEDAHEFLRHLLDKMVDC L R+GVK     R AETT I+RIFGGY+ S+LKC    CGHCSDTFDPF+DLSM+LS GVRS+  AL RF +TE L   N+WRCGGC+K V+AEK L+VFKPPNALV+QLKRFV+TRK  A+K++  I F+D L L VSGPER+A Y LTGVVVH GGSMSSGHYYAYVRS AG W +MDD  VSKVK +TVL DQAY+LFYTR   P P V  +P   S  PAV     SS +S   AG P A   T
Sbjct:  369 QEDAHEFLRHLLDKMVDCYLKRKGVKSSAPSRLAETTPINRIFGGYLRSRLKCTK--CGHCSDTFDPFMDLSMDLSRGVRSIEVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFTRK--ASKIKDHIQFADVLNLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWARMDDCSVSKVKRETVLRDQAYVLFYTRRPAPQPVVASIPPAPSLSPAV---KVSSTASAAVAGKPTATAST 628          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: D8LD98_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.100e-76
Identity = 155/263 (58.94%), Postives = 180/263 (68.44%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMEL----SNGV----RSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTRNLPP--PRV---------PRLPCNSSKPAVAG 247
            QEDAHEFLRHL+DKM    L R+GV      R AETT I R+FGGY+ SQLKC    CG CSDTFDPF+DL+M +    S+GV    RS+  AL RFT+ E L   N+W+CGGC KLV AEK L+VFKPPNALV QLKRF +T   +  KV+  I+F D L L VSGPER A Y LTGVVVH G +MSSGHYYAYVRSSAG W +M+D+ V+KV L TVL D+AY+LFYTR  PP  P V         P L  +SS PAV G
Sbjct:  238 QEDAHEFLRHLVDKMAGSYLERRGVDPFAPNRLAETTPIHRVFGGYLRSQLKCSE--CGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPR--KVKDHISFGDKLNLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFYTRRPPPAPPAVQRPILPTPSPSLASSSSSPAVGG 496          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: A0A6H5JKG0_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 4.590e-67
Identity = 149/284 (52.46%), Postives = 177/284 (62.32%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMEL----SNGV----RSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSK-------------------VKLQTVLNDQAYLLFYTR-NLP-PPRV---------PRLPCNSSKPAVAGRL 249
            QEDAHE LRHL+DKM    L R+GV    + R  ETT I R+FGGY+ SQL+C    CG CSDTFDPF+DL+M +    S GV    RS+  AL RFT+ E L   N+W+CGGC KLV AEK L+VFKPPNALV QLKRF +T   +  KV   I+F D L L VSGPER   Y LTGVV+H G +MSSGHYYAYVRSSAG W +M+D+ V+K                   V L TVL D+AY+LFYTR  +P PP V         P L  +SS PA  G +
Sbjct:  299 QEDAHELLRHLVDKMAGSYLERRGVDPFASNRLGETTPIHRVFGGYLRSQLECSK--CGFCSDTFDPFMDLAMNVEKVDSRGVAMKERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPR--KVNDHISFGDKLNLEVSGPERWTNYDLTGVVIHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKDQGQLNPSSTRTRSLACIQVTLDTVLRDKAYVLFYTRCPVPAPPAVQRPILPTPSPSLASSSSSPATGGTV 578          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 223 bits (569), Expect = 2.180e-62
Identity = 108/227 (47.58%), Postives = 152/227 (66.96%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTRNLPP 230
            QEDAHEFLR L+D M +  L R GVK     R  ETTAI+R+FGGY+ +Q++C    C +CS+T++ ++DLS+++   + S+ +AL RF + E LD +N+WRCGGC++ V A K+LT+   PNALV+ LKRF Y R+    K++  + + + L+L VSGPE+   Y L GVVVH+GG+M  GHY+AY+R+S   W +MDD  V   +    L  QAY+LFYTR   P
Sbjct:   99 QEDAHEFLRKLVDSMAEAILRRHGVKANAPHRLDETTAINRVFGGYLRNQVQCTK--CRYCSNTYELYMDLSLDMVGNISSLEDALKRFQAVETLDSSNRWRCGGCKQKVCARKQLTIHTAPNALVLHLKRFAYGRQS--TKIRRHVAYPEHLDLKVSGPEKRVGYDLCGVVVHEGGTMQFGHYFAYIRASNKLWYRMDDAHVKSTRKSRALEQQAYMLFYTRTPDP 321          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: K8ZBR0_NANGC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC)

HSP 1 Score: 227 bits (578), Expect = 2.150e-61
Identity = 117/234 (50.00%), Postives = 157/234 (67.09%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTR--NLPPPRVPR 235
            QEDAHEFLRHLLD +   CL    VK    GR AETT + RIFGGY+ SQ++C    CGHCS+T+D FLDLS+E+   V  + EAL RFT+ E LD AN+WRC  C +LV A+KRL+    PN   VQLKRF++    +++K+  ++ + + L L +SGPE +A+Y L GV+VH G S++ GHYY+ V+++ G W +MDD  V +V L TVL+  AYLLFY +    PPP + R
Sbjct:  252 QEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQ--CGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFG--SRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPPPALDR 481          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: W7TEV7_9STRA (Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.490e-58
Identity = 117/234 (50.00%), Postives = 157/234 (67.09%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTR--NLPPPRVPR 235
            QEDAHEFLRHLLD +   CL    VK    GR AETT + RIFGGY+ SQ++C    CGHCS+T+D FLDLS+E+   V  + EAL RFT+ E LD AN+WRC  C +LV A+KRL+    PN   VQLKRF++    +++K+  ++ + + L L +SGPE +A+Y L GV+VH G S++ GHYY+ V+++ G W +MDD  V +V L TVL+  AYLLFY +    PPP + R
Sbjct:  252 QEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQ--CGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFG--SRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPPPALDR 481          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: A0A4D9CS17_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA)

HSP 1 Score: 226 bits (575), Expect = 4.880e-58
Identity = 116/234 (49.57%), Postives = 157/234 (67.09%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTR--NLPPPRVPR 235
            QEDAHEFLRHLLD + + CL    VK    GR AETT + RIFGGY+ SQ++C    CGHCS+T+D FLDLS+E+   V  + EAL RFT+ E LD AN+W+C  C +LV A+KRL+    PN   VQLKRF++    +++K+  ++ + + L L +SGPE +A+Y L GV+VH G S++ GHYY+ V+++ G W +MDD  V +V L TVL   AYLLFY +    PPP + R
Sbjct:  252 QEDAHEFLRHLLDALQNGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQ--CGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWKCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFG--SRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLRQHAYLLFYVKVGPSPPPALDR 481          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: A0A7S3HAX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAX9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.150e-53
Identity = 106/225 (47.11%), Postives = 150/225 (66.67%), Query Frame = 0
Query:    5 EDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTRNLP 229
            EDAHE+LR LLD M +  L  +GVK    G+ AET+ ISR+FGGY+C+ L C    C + S TF+ FLD+S++++ GV+S+  A+  FT  E L   N+W+C  C++ V+A+K++ + K PN LV+ LKRF Y      AK+   + FS ++ +P  G +  AKY L GVVVH G S  SGHY AYV++S G W +M+D+ VS V +QTVL+ QAY+LFY+R +P
Sbjct:    1 EDAHEYLRQLLDCMHEEVLKARGVKTS-DGKIAETSMISRVFGGYLCNTLTCGQ--CQYVSKTFNHFLDMSLDINQGVKSIGGAIDAFTKPEYLSAGNEWKCEKCKQKVKAKKQMVIHKLPNVLVIHLKRFSYG--NMFAKITKPVQFSAEMLVPY-GEKGKAKYELYGVVVHHGHSTHSGHYIAYVKASNGVWHEMNDSHVSVVSVQTVLSCQAYILFYSRVMP 219          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: A0A7S1U5Y3_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5Y3_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.610e-52
Identity = 105/229 (45.85%), Postives = 143/229 (62.45%), Query Frame = 0
Query:    4 QEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGK---AAKVQADITFSDDLELPVSGPE---RAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVKMDDTFVSKVKLQTVLNDQAYLLFYTR 226
            QEDAHE+LR LLD +   CL R G+K    GR  ET+A+ R+FGGY+ SQLKC    C +CS+T+D  LDLS+E+   V S+  AL  F + EILD  N+W+CGGC KLVRA K++TVF+ P  L +QLKRF +   G      K+   I + + L + ++G      A +Y L GVVVH G S++ GHY+AYVR +   W   DD+   +V  +  L+ +AY+LFY R
Sbjct:  140 QEDAHEYLRQLLDGLHKSCLMRSGLKPTACGRREETSAMHRLFGGYLRSQLKCND--CAYCSNTYDACLDLSLEIHGKVSSLPSALEAFQAAEILDKDNRWKCGGCNKLVRARKQITVFRAPAVLCIQLKRFSFGFGGGFFGGGKITRFIPYPEVLTVDITGGRARREAVRYRLQGVVVHVGQSVNVGHYFAYVRGANNLWYLKDDSSTQQVPRKEALSQKAYILFYVR 366          
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Match: A0A1E7FKE1_9STRA (Cysteine proteinase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKE1_9STRA)

HSP 1 Score: 187 bits (476), Expect = 1.080e-49
Identity = 114/247 (46.15%), Postives = 145/247 (58.70%), Query Frame = 0
Query:    5 EDAHEFLRHLLDKMVDCCLHRQGVKRPIAG--------RGAETTAISRIFGGYMCSQLKCMSKACGHCSDTFDPFLDLSMELSN-GVRSVSEALHRFTSTEILDGANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRK-----------GKAAKVQADITFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYV----RSSAGPWVKMDDTFVSKVKLQTVLNDQ-AYLLFYTR 226
            EDAHEFL HLLD M D  L   G+ + ++G        R  ETT I R FGGY  SQ++C  + C + S+T+DPFLDLS+E+S     SV  AL  FT  E LD AN+W+C GC+K V A K+LTVF+PP +L +QLKRF +              G  +K+   I F   L LP+S   R+ +Y LTG+V+H GGS  SGHY AYV    R  A  W  +DD+ V  V  +TVL  + AYLLFY R
Sbjct:   65 EDAHEFLVHLLDAMNDGELRAAGINQHLSGWRDRLPVTRLNETTFIHRTFGGYFRSQVRC--RKCNYRSNTYDPFLDLSLEVSKKSSTSVLNALSEFTRKETLDAANQWKCSGCKKYVCATKQLTVFRPPLSLCIQLKRFAFNSGTNGYKSSKYGGGGGSKISKPIEFPATLNLPLSD-NRSCRYTLTGIVIHVGGSSHSGHYTAYVKKPDRKGASQWYHIDDSDVEPVSEKTVLRQKDAYLLFYCR 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5645.13177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJN5_9PHAE1.260e-8765.17USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LD98_ECTSI2.100e-7658.94Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A6H5JKG0_9PHAE4.590e-6752.46Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A835YLY7_9STRA2.180e-6247.58USP domain-containing protein (Fragment) n=1 Tax=T... [more]
K8ZBR0_NANGC2.150e-6150.00Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
W7TEV7_9STRA2.490e-5850.00Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=N... [more]
A0A4D9CS17_9STRA4.880e-5849.57Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
A0A7S3HAX9_9STRA1.150e-5347.11Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1U5Y3_9STRA3.610e-5245.85Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A1E7FKE1_9STRA1.080e-4946.15Cysteine proteinase (Fragment) n=1 Tax=Fragilariop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 1..228
e-value: 4.5E-63
score: 215.7
NoneNo IPR availablePANTHERPTHR24006:SF727UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 42coord: 3..227
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 3..227
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 470..878
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 450..469
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..449
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 2..224
e-value: 2.1E-27
score: 96.3
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 169..187
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..227
score: 36.885
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 3..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5645contigH-paniculata_contig5645:536..10029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5645.13177.1mRNA_H-paniculata_contig5645.13177.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5645 527..12197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5645.13177.1 ID=prot_H-paniculata_contig5645.13177.1|Name=mRNA_H-paniculata_contig5645.13177.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=879bp
MDSQEDAHEFLRHLLDKMVDCCLHRQGVKRPIAGRGAETTAISRIFGGYM
CSQLKCMSKACGHCSDTFDPFLDLSMELSNGVRSVSEALHRFTSTEILDG
ANKWRCGGCQKLVRAEKRLTVFKPPNALVVQLKRFVYTRKGKAAKVQADI
TFSDDLELPVSGPERAAKYYLTGVVVHKGGSMSSGHYYAYVRSSAGPWVK
MDDTFVSKVKLQTVLNDQAYLLFYTRNLPPPRVPRLPCNSSKPAVAGRLW
SSASSTPTAGVPAAAVGTTSAVKKALATGETAESSGEELSEETPGRSGSR
PRVAVASEEAVAALGSRAADGVDDTGGDNSRSNGTIPADETATPRPAAFT
DVSATPVTVANSGGSPVTPGAGVRIINEACSSNSISADVGGGASVSQAGC
KMLVQGVERQVDPASDGGDKAAASSGSGGRAVPSEGKKAKKRKRKMEREA
AAAAAAAAAAAATGIYDLVEFAKRDKAGRSPLVEGGKGLESCTSPAADLG
GGDCDGEGSLKKRRRASADSDASGVVDGDGKIGCMGVAEVAGTAGVGLEL
GGELGVDAGVLPFPKGDGVETATGVETEVVGHDQDQGGVGCRGGESSNGS
QSSSNHKSGKVKKRKRKVAGTAVSPTTGAENTNDTENQHTTPQQKSPPQN
PENSTREGQSNQGDPQPQARPSGVAVVATAATTATADGTVEPALQDQTAA
ASAGGSRGGGEGQFCSRSPPSRSTADKSGGAVEEAASGTTPGSLKSVAAA
KETQVELLRARAVEELEEKVSRANSFWDRSLDMGKQKKIKNKQDPMPQTD
INPFEAKQREIHGQSKRGHWEHVPEDSDSGPNGGGGGGSGGGRHGRGGGR
GGGRGRGGGARAFRGKGGSPRAKGGKKW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf