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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2233 |
| Cds size | 2214 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5643.13175.1 >prot_H-paniculata_contig5643.13175.1 ID=prot_H-paniculata_contig5643.13175.1|Name=mRNA_H-paniculata_contig5643.13175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=738bp
MLQLAFCRWLVDCWSQRFRFSTAEMRIMLLHAASAIDRQELPHVAPGQEA
DVSAAGSSRNGSHESDKARLQRQVRRTGMEKAILGLTERLDGTKQSEGKG
GVEDTKYQAVDIQAGMQALNPGSSWCNTVLFIQACPSLCAVVLLLVLDFA
AKLLMLPSLLVWSGGSGDAEGGAGGREVAEASCQAKEGIWWVLLLALFLA
PVSVEVLGLRAMWRERHGTKFTEKRESVPPADSFSFLLEKSNPGLCQVWT
NACRGAECLRAEFQKPTREKLMAVSPDAASVSPGTTTSALLELAMRIRER
GVAGAASWRPQQPLETTTTPSSKSSSVDSPSAATARLPENLNAPTTTFSS
VTGAERVNISSSSSGGAQSGRNSDNADVSEHDATPTPVVLSMIPRGGSSR
RGSINASVTTALSELTPEQGKQGGRETVQRVGRDSCESSTSSPVASEVAL
PLVEGPAAAAEASCRSAGQREGCAEIEAVASIAPPVQAPEGWSSVLDIAV
ARAGVGDERGDEGCAARQQLEVGEKEDDERDSNDRSCLAVDSGEISTSMS
APAADGENSKNGDTPTLPTMPFSPGTLPLPPPPPQEQLLRTPENTASGAS
TTREDAEPGENAHSSSDNSFSRKTASTATAAISETIHPAETPAAAATTAA
AAASPMSSCSPTPRAEDGENKNWVLGAGEALVGVAGGASDVVVGATSAAF
GVAGGLAGAVGEVAGGAIGFVVPVLIGSLGWWVSGVGG back to topmRNA from alignment at H-paniculata_contig5643:8923..13062- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5643.13175.1 ID=mRNA_H-paniculata_contig5643.13175.1|Name=mRNA_H-paniculata_contig5643.13175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4140bp|location=Sequence derived from alignment at H-paniculata_contig5643:8923..13062- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGTCCACCGAGTGCATGCTACAGCTGGCGTTCTGTAGGTGGTTGGTG
GACTGCTGGTCGCAGCGGTTCCGGTTTTCGACGGCAGAGATGCGCATCAT
GCTGCTTCACGCCGCGTCTGCCATCGACAGACAGGAGCTTCCGCATGTGG
CACCCGGGCAAGAAGCAGACGTTTCAGCGGCCGGTAGCAGTCGTAACGGG
AGTCATGAATCGGATAAAGCTAGGTTACAGCGGCAAGTGAGGCGGACAGG
AATGGAAAAGGCGATTTTGGGTCTGACGGAACGGCTGGATGGGACAAAGC
AGTCTGAGGGAAAAGGCGGCGTTGAGGACACGGTGAGGGAGGAATTGATG
CGCTGGAGTGTCCCATTTTTTGTTTGGTTCATTGTACTGGGAGTTGGTAA
TGAAGGGAAACAGAGGTATAGAAGAAGGAGACGAAGACAGAGAGGAAGAG
ACCGGGAGACAGGGAGAGATGCAGACACAGACACAGAGATACAGAGGAAC
ACCCAGAGAAAGAGAGGTTCCTCTAATTTTTCCTTGGGAGTTTGTCGTCT
AGCTCGTCTTATTCTAGGGTATATCGTACTTTTTCATGGAGCGTGGCAGT
GTGGTTTCATGGTGGAAGCTGGAAATTCCCGTGGCCTACGAATCGATCCG
ACAAACCATAGGTGATTCAACAAGCCGGCTGAGGCCGGTGAAATTCGAGG
GTTCTTGCCCCCCGTTCCCCACCCTCAGCTGATTCGGATAACCGATTGTA
GAATATGTTTGCGGCGCATGTGGCACCCCTTGACACCGGGGTCATGGCCG
AAGCTATGGCTTCCCTCACGAATACCTTTGTCTTCGCTCGCCCCTCTTAT
GAGCATGCCCTTTCTGGCATTTTGATTTCTGAGTCGCTTTGAGTTATGTT
ACGTACTCCGAGTACAGATTATTTCGATCCTCCGTTGGATTTTGTGCGAT
CTTATGATGGCTCCTGGGTCAGGATTATATGTATACATGCCCACATGCAC
ACACAAATGCTTTGGTAGGATTTTGTCGAATGTGTGTAAAATGTGTGTAA
TGTGTCTCTACCCAAAATTCTCATCTCAGTCGACAAGCCAAATATTTTCA
TATGCAGTCCGTGCGTGACGGACAGTATATACAGTCAACAGTAGTGCCAT
CGTTGATTGAGTGAAGAAGTGCTCCTATTCCAAAGTAGATTTACTCCTTG
TTATTGAGCAGACGCTATTTCGTTCGACTTCCACCCCTTTCCCCTTTTTT
GGTCATGATCTAATTTTGCTGATGAGTTTACTAAACTGAAAGTTGAGGTC
AGCTGCATAGCCTCAACATGGGTACAATGAAGTTGTAGGTTACTATGTGA
GATTGTACATGGGTCTAATAGTGACCCCCCCCCCCCCCCCGCTTTCCCTC
CCGCGCGCTTGCCCCCACCTTCCGGACAACTTGTACTTGTTCTTCATCGC
CCGTGAAGAAGTATCAAGCGGTAGATATTCAGGCTGGCATGCAGGCCTTA
AATCCCGGCAGCTCCTGGTGCAATACTGTTCTCTTCATCCAAGCCTGTCC
TAGTTTGTGCGCTGTTGTGTTGCTGCTGGTGCTCGATTTTGCGGCGAAGC
TGCTGATGCTGCCGTCGCTGCTTGTATGGAGTGGTGGAAGCGGGGATGCC
GAAGGAGGGGCAGGGGGAAGAGAGGTAGCGGAGGCGTCGTGTCAGGCGAA
GGAAGGAATATGGTGGGTGCTGCTTCTGGCTCTGTTTTTGGCACCTGTTT
CGGTGGAGGTCCTCGGGCTCCGAGCGATGTGGAGGGAGGTGCGTTCTGGG
TGTTACTGTTTGTTATTGTCATGATTCAAGTTGTTATTGTTAATGTCGTG
ATCCAATATGTTGATGAGGTTGTTGTACTTCACCAACGGAGATTTTGATG
AGATGATGGTTTTACAAGGTTAGTCGTCCATGTGGGTTGTGAAGTCAAAT
GGAGTGCCGTATTTATGTCAACCCGGATATGACGCACCTGGCGCCCGCGA
GACACCATGACTTGAAAACATTCGTGACCGCACCTCAAACCGTTTTTTGG
ACGTGCGAAGTATTAAATAGTTTTTTTGTGACTTCTTCCCCCCCTCCCTT
TGCCTTCGCCTCGCATTTCCCCTTCCCGACCCTACAGCGACATGGCACTA
AATTCACCGAAAAGCGGGAATCGGTGCCGCCAGCAGACAGTTTCTCGTTT
TTGCTTGAAAAGTCTAATCCTGGTCTCTGCCAGGTTTGGACGAACGCCTG
TCGGGGTGCGGAGTGCCTGCGCGCGGAATTTCAAAAACCGACACGGGAGA
AGTTGATGGCGGTTTCGCCTGATGCGGCGTCAGTTTCTCCAGGCACGGTG
AGTTGGTTTGTTTACCGAGTGCACCTACCTCTGTACGCCCTTTTGACAAT
GCGTATGGTTGACTCGCCCATGAACTTTCCCGAGAGAGCTATTCTTGCAC
GTGCTCCAGTTCAACCCGTCTGTAATTTTTTCTTTTTTACCCGTCAATTT
TGTAGTGTGTGTGTGTTGCTATTGTTCATAATTTGGTTTGTAGTATTTGT
CGGGCTGGTTTTGTGTCCTTTTCAAGCTTGTACTTTTTGGCCACCCCCCG
AGATTAATCGCGGGTATGTTTTAGCGAAAGTTTGAAAGCTCATTGCTTGA
TCCGGTTGTACATTTTTGTCTCCTACCGCTGTCGCTACGCGGCAACTCTC
TTGCTGTACCATCGTACAACGTACCCCAAATTTTTGTGTCATGCCCTCAC
GCTTTAATCTATTGCCAATGTTGTCAACCAGACCACCAGCGCCCTGCTAG
AGTTGGCGATGAGGATACGAGAAAGGGGTGTTGCAGGCGCCGCCAGCTGG
AGGCCTCAGCAACCCCTGGAAACCACCACTACGCCTTCCTCCAAGTCCAG
TTCCGTCGATAGCCCAAGCGCGGCTACAGCAAGGTTACCCGAAAATCTGA
ATGCTCCTACTACCACGTTCTCCTCCGTCACTGGCGCGGAACGCGTCAAC
ATTAGCAGCAGCAGCAGTGGCGGAGCGCAAAGTGGTCGAAATAGCGACAA
CGCCGATGTGTCTGAACACGACGCTACACCTACTCCAGTGGTGCTAAGCA
TGATTCCTAGAGGTGGTAGCAGCAGGAGGGGTAGTATTAACGCCTCTGTG
ACTACTGCGCTGAGTGAACTAACCCCGGAGCAAGGGAAGCAGGGCGGCCG
GGAGACTGTGCAACGTGTCGGTCGAGATAGTTGTGAGTCGAGCACCTCCT
CTCCCGTAGCTTCCGAGGTGGCGTTGCCTCTGGTGGAGGGGCCGGCAGCG
GCTGCCGAAGCATCATGTCGTTCTGCGGGACAACGAGAAGGTTGTGCGGA
GATCGAAGCGGTGGCGTCGATTGCGCCACCTGTGCAAGCACCAGAAGGGT
GGTCGTCTGTACTGGATATTGCTGTTGCGCGGGCGGGAGTAGGAGATGAG
CGAGGCGATGAAGGCTGTGCCGCGCGCCAGCAACTAGAAGTAGGGGAGAA
AGAGGATGATGAGCGTGATAGCAATGATAGGTCCTGCCTCGCCGTCGACA
GTGGCGAAATCAGCACGTCTATGAGCGCCCCAGCAGCGGACGGTGAGAAC
AGCAAAAATGGCGACACACCAACACTACCGACAATGCCATTTTCCCCTGG
CACGCTGCCGTTGCCACCTCCGCCGCCACAGGAACAACTCCTACGCACGC
CCGAGAACACAGCCTCCGGCGCTAGCACTACAAGGGAAGACGCAGAACCT
GGGGAGAATGCACACTCCTCATCCGACAACAGTTTCAGTCGCAAAACTGC
ATCAACCGCCACAGCAGCCATCAGTGAAACCATCCACCCCGCCGAAACAC
CGGCCGCCGCTGCCACCACTGCTGCTGCCGCCGCCTCTCCGATGTCGTCT
TGCTCCCCAACTCCCCGAGCCGAAGATGGTGAAAACAAGAACTGGGTGTT
GGGAGCGGGCGAGGCCTTGGTTGGGGTTGCGGGCGGCGCCTCCGACGTAG
TGGTCGGTGCGACTTCGGCGGCCTTCGGCGTGGCAGGTGGACTGGCGGGT
GCTGTCGGGGAAGTCGCCGGTGGCGCGATTGGGTTCGTCGTCCCCGTCTT
AATTGGTTCGCTCGGTTGGTGGGTCAGCGGCGTCGGCGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5643:8923..13062- >mRNA_H-paniculata_contig5643.13175.1 ID=mRNA_H-paniculata_contig5643.13175.1|Name=mRNA_H-paniculata_contig5643.13175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4428bp|location=Sequence derived from alignment at H-paniculata_contig5643:8923..13062- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTACAGCTGGCGTTCTGTAGGTGGTTGGTGGACTGCTGGTCGCAGCG
GTTCCGGTTTTCGACGGCAGAGATGCGCATCATGCTGCTTCACGCCGCGT
CTGCCATCGACAGACAGGAGCTTCCGCATGTGGCACCCGGGCAAGAAGCA
GACGTTTCAGCGGCCGGTAGCAGTCGTAACGGGAGTCATGAATCGGATAA
AGCTAGGTTACAGCGGCAAGTGAGGCGGACAGGAATGGAAAAGGCGATTT
TGGGTCTGACGGAACGGCTGGATGGGACAAAGCAGTCTGAGGGAAAAGGC
GGCGTTGAGGACACGATGCTACAGCTGGCGTTCTGTAGGTGGTTGGTGGA
CTGCTGGTCGCAGCGGTTCCGGTTTTCGACGGCAGAGATGCGCATCATGC
TGCTTCACGCCGCGTCTGCCATCGACAGACAGGAGCTTCCGCATGTGGCA
CCCGGGCAAGAAGCAGACGTTTCAGCGGCCGGTAGCAGTCGTAACGGGAG
TCATGAATCGGATAAAGCTAGGTTACAGCGGCAAGTGAGGCGGACAGGAA
TGGAAAAGGCGATTTTGGGTCTGACGGAACGGCTGGATGGGACAAAGCAG
TCTGAGGGAAAAGGCGGCGTTGAGGACACGAAGTATCAAGCGGTAGATAT
TCAGGCTGGCATGCAGGCCTTAAATCCCGGCAGCTCCTGGTGCAATACTG
TTCTCTTCATCCAAGCCTGTCCTAGTTTGTGCGCTGTTGTGTTGCTGCTG
GTGCTCGATTTTGCGGCGAAGCTGCTGATGCTGCCGTCGCTGCTTGTATG
GAGTGGTGGAAGCGGGGATGCCGAAGGAGGGGCAGGGGGAAGAGAGGTAG
CGGAGGCGTCGTGTCAGGCGAAGGAAGGAATATGGTGGGTGCTGCTTCTG
GCTCTGTTTTTGGCACCTGTTTCGGTGGAGGTCCTCGGGCTCCGAGCGAT
GTGGAGGGAGAAGTATCAAGCGGTAGATATTCAGGCTGGCATGCAGGCCT
TAAATCCCGGCAGCTCCTGGTGCAATACTGTTCTCTTCATCCAAGCCTGT
CCTAGTTTGTGCGCTGTTGTGTTGCTGCTGGTGCTCGATTTTGCGGCGAA
GCTGCTGATGCTGCCGTCGCTGCTTGTATGGAGTGGTGGAAGCGGGGATG
CCGAAGGAGGGGCAGGGGGAAGAGAGGTAGCGGAGGCGTCGTGTCAGGCG
AAGGAAGGAATATGGTGGGTGCTGCTTCTGGCTCTGTTTTTGGCACCTGT
TTCGGTGGAGGTCCTCGGGCTCCGAGCGATGTGGAGGGAGCGACATGGCA
CTAAATTCACCGAAAAGCGGGAATCGGTGCCGCCAGCAGACAGTTTCTCG
TTTTTGCTTGAAAAGTCTAATCCTGGTCTCTGCCAGGTTTGGACGAACGC
CTGTCGGGGTGCGGAGTGCCTGCGCGCGGAATTTCAAAAACCGACACGGG
AGAAGTTGATGGCGGTTTCGCCTGATGCGGCGTCAGTTTCTCCAGGCACG
CGACATGGCACTAAATTCACCGAAAAGCGGGAATCGGTGCCGCCAGCAGA
CAGTTTCTCGTTTTTGCTTGAAAAGTCTAATCCTGGTCTCTGCCAGGTTT
GGACGAACGCCTGTCGGGGTGCGGAGTGCCTGCGCGCGGAATTTCAAAAA
CCGACACGGGAGAAGTTGATGGCGGTTTCGCCTGATGCGGCGTCAGTTTC
TCCAGGCACGACCACCAGCGCCCTGCTAGAGTTGGCGATGAGGATACGAG
AAAGGGGTGTTGCAGGCGCCGCCAGCTGGAGGCCTCAGCAACCCCTGGAA
ACCACCACTACGCCTTCCTCCAAGTCCAGTTCCGTCGATAGCCCAAGCGC
GGCTACAGCAAGGTTACCCGAAAATCTGAATGCTCCTACTACCACGTTCT
CCTCCGTCACTGGCGCGGAACGCGTCAACATTAGCAGCAGCAGCAGTGGC
GGAGCGCAAAGTGGTCGAAATAGCGACAACGCCGATGTGTCTGAACACGA
CGCTACACCTACTCCAGTGGTGCTAAGCATGATTCCTAGAGGTGGTAGCA
GCAGGAGGGGTAGTATTAACGCCTCTGTGACTACTGCGCTGAGTGAACTA
ACCCCGGAGCAAGGGAAGCAGGGCGGCCGGGAGACTGTGCAACGTGTCGG
TCGAGATAGTTGTGAGTCGAGCACCTCCTCTCCCGTAGCTTCCGAGGTGG
CGTTGCCTCTGGTGGAGGGGCCGGCAGCGGCTGCCGAAGCATCATGTCGT
TCTGCGGGACAACGAGAAGGTTGTGCGGAGATCGAAGCGGTGGCGTCGAT
TGCGCCACCTGTGCAAGCACCAGAAGGGTGGTCGTCTGTACTGGATATTG
CTGTTGCGCGGGCGGGAGTAGGAGATGAGCGAGGCGATGAAGGCTGTGCC
GCGCGCCAGCAACTAGAAGTAGGGGAGAAAGAGGATGATGAGCGTGATAG
CAATGATAGGTCCTGCCTCGCCGTCGACAGTGGCGAAATCAGCACGTCTA
TGAGCGCCCCAGCAGCGGACGGTGAGAACAGCAAAAATGGCGACACACCA
ACACTACCGACAATGCCATTTTCCCCTGGCACGCTGCCGTTGCCACCTCC
GCCGCCACAGGAACAACTCCTACGCACGCCCGAGAACACAGCCTCCGGCG
CTAGCACTACAAGGGAAGACGCAGAACCTGGGGAGAATGCACACTCCTCA
TCCGACAACAGTTTCAGTCGCAAAACTGCATCAACCGCCACAGCAGCCAT
CAGTGAAACCATCCACCCCGCCGAAACACCGGCCGCCGCTGCCACCACTG
CTGCTGCCGCCGCCTCTCCGATGTCGTCTTGCTCCCCAACTCCCCGAGCC
GAAGATGGTGAAAACAAGAACTGGGTGTTGGGAGCGGGCGAGGCCTTGGT
TGGGGTTGCGGGCGGCGCCTCCGACGTAGTGGTCGGTGCGACTTCGGCGG
CCTTCGGCGTGGCAGGTGGACTGGCGGGTGCTGTCGGGGAAGTCGCCGGT
GGCGCGATTGGGTTCGTCGTCCCCGTCTTAATTGGTTCGCTCGGTTGGTG
GGTCAGCGGCGTCGGCGGCACCACCAGCGCCCTGCTAGAGTTGGCGATGA
GGATACGAGAAAGGGGTGTTGCAGGCGCCGCCAGCTGGAGGCCTCAGCAA
CCCCTGGAAACCACCACTACGCCTTCCTCCAAGTCCAGTTCCGTCGATAG
CCCAAGCGCGGCTACAGCAAGGTTACCCGAAAATCTGAATGCTCCTACTA
CCACGTTCTCCTCCGTCACTGGCGCGGAACGCGTCAACATTAGCAGCAGC
AGCAGTGGCGGAGCGCAAAGTGGTCGAAATAGCGACAACGCCGATGTGTC
TGAACACGACGCTACACCTACTCCAGTGGTGCTAAGCATGATTCCTAGAG
GTGGTAGCAGCAGGAGGGGTAGTATTAACGCCTCTGTGACTACTGCGCTG
AGTGAACTAACCCCGGAGCAAGGGAAGCAGGGCGGCCGGGAGACTGTGCA
ACGTGTCGGTCGAGATAGTTGTGAGTCGAGCACCTCCTCTCCCGTAGCTT
CCGAGGTGGCGTTGCCTCTGGTGGAGGGGCCGGCAGCGGCTGCCGAAGCA
TCATGTCGTTCTGCGGGACAACGAGAAGGTTGTGCGGAGATCGAAGCGGT
GGCGTCGATTGCGCCACCTGTGCAAGCACCAGAAGGGTGGTCGTCTGTAC
TGGATATTGCTGTTGCGCGGGCGGGAGTAGGAGATGAGCGAGGCGATGAA
GGCTGTGCCGCGCGCCAGCAACTAGAAGTAGGGGAGAAAGAGGATGATGA
GCGTGATAGCAATGATAGGTCCTGCCTCGCCGTCGACAGTGGCGAAATCA
GCACGTCTATGAGCGCCCCAGCAGCGGACGGTGAGAACAGCAAAAATGGC
GACACACCAACACTACCGACAATGCCATTTTCCCCTGGCACGCTGCCGTT
GCCACCTCCGCCGCCACAGGAACAACTCCTACGCACGCCCGAGAACACAG
CCTCCGGCGCTAGCACTACAAGGGAAGACGCAGAACCTGGGGAGAATGCA
CACTCCTCATCCGACAACAGTTTCAGTCGCAAAACTGCATCAACCGCCAC
AGCAGCCATCAGTGAAACCATCCACCCCGCCGAAACACCGGCCGCCGCTG
CCACCACTGCTGCTGCCGCCGCCTCTCCGATGTCGTCTTGCTCCCCAACT
CCCCGAGCCGAAGATGGTGAAAACAAGAACTGGGTGTTGGGAGCGGGCGA
GGCCTTGGTTGGGGTTGCGGGCGGCGCCTCCGACGTAGTGGTCGGTGCGA
CTTCGGCGGCCTTCGGCGTGGCAGGTGGACTGGCGGGTGCTGTCGGGGAA
GTCGCCGGTGGCGCGATTGGGTTCGTCGTCCCCGTCTTAATTGGTTCGCT
CGGTTGGTGGGTCAGCGGCGTCGGCGGC back to top
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