prot_H-paniculata_contig5639.13168.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5639.13168.1
Unique Nameprot_H-paniculata_contig5639.13168.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5639.13168.1 vs. uniprot
Match: A0A6H5KQJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ2_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.190e-17
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:    1 EEESPFGSLEADEVEEVFQDSEVPHIEIDVLKVALRYLKGEFTNVSVIA 49
            EEESPFGSL+A E+EEVF+DS VP IEID +KVALRYLKGEFTNVSV A
Sbjct:   71 EEESPFGSLDASELEEVFEDSGVPRIEIDAIKVALRYLKGEFTNVSVKA 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5639.13168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQJ2_9PHAE7.190e-1781.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5639contigH-paniculata_contig5639:12193..13511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5639.13168.1mRNA_H-paniculata_contig5639.13168.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5639 11946..13511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5639.13168.1 ID=prot_H-paniculata_contig5639.13168.1|Name=mRNA_H-paniculata_contig5639.13168.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
EEESPFGSLEADEVEEVFQDSEVPHIEIDVLKVALRYLKGEFTNVSVIAR
TFKT*
back to top