prot_H-paniculata_contig56310.13157.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56310.13157.1
Unique Nameprot_H-paniculata_contig56310.13157.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length42
Homology
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BLAST of mRNA_H-paniculata_contig56310.13157.1 vs. uniprot
Match: A0A6H5K0Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z2_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 3.460e-6
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:    3 GFAGGMLLAFALMPQIILAHKRQSTSDISFVWQ 35
            G  GG++LA AL+PQI+LAHKR+S  DIS++WQ
Sbjct:   16 GTTGGIILACALVPQIVLAHKRRSAEDISYMWQ 48
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56310.13157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0Z2_9PHAE3.460e-663.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 1..34
e-value: 6.1E-7
score: 29.1
NoneNo IPR availableGENE3D1.20.1280.290coord: 1..40
e-value: 1.5E-5
score: 27.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56310contigH-paniculata_contig56310:471..596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56310.13157.1mRNA_H-paniculata_contig56310.13157.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56310 471..602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56310.13157.1 ID=prot_H-paniculata_contig56310.13157.1|Name=mRNA_H-paniculata_contig56310.13157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=42bp
MLGFAGGMLLAFALMPQIILAHKRQSTSDISFVWQVSVPLYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt