prot_H-paniculata_contig56149.13141.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56149.13141.1
Unique Nameprot_H-paniculata_contig56149.13141.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: A0A1I9LVW6_9PHAE (50S ribosomal protein L16, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVW6_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.370e-89
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTKIN 136
            +LSPKKTKF+KQHRGRLKGKASRGN INFG+YA+QALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVA+VKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTKIN
Sbjct:    1 MLSPKKTKFKKQHRGRLKGKASRGNNINFGEYALQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTKIN 136          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: D1J745_ECTSI (50S ribosomal protein L16, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=D1J745_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 3.540e-86
Identity = 126/134 (94.03%), Postives = 131/134 (97.76%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +LSPKKTKFRKQHRGRLKGKASRGN+INFGDYA+QALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVA+VKPGHILFEL GVP KLAKEAL+IASYKLPIKTKFL K
Sbjct:    1 MLSPKKTKFRKQHRGRLKGKASRGNSINFGDYALQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAVVKPGHILFELGGVPAKLAKEALEIASYKLPIKTKFLKK 134          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: A0A0R6M0J1_UNDPI (50S ribosomal protein L16, chloroplastic n=49 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M0J1_UNDPI)

HSP 1 Score: 248 bits (633), Expect = 5.650e-83
Identity = 123/132 (93.18%), Postives = 129/132 (97.73%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFL 132
            +LSPKKTKFRKQHRGRLKGKASRGN I+FGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKP+TARAAESRMGSGKGSV+YWVA+VKPG ILFELSGVPLKLAKEA+ IASYKLPIKTKFL
Sbjct:    1 MLSPKKTKFRKQHRGRLKGKASRGNKISFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPVTARAAESRMGSGKGSVDYWVAVVKPGTILFELSGVPLKLAKEAMIIASYKLPIKTKFL 132          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: A0A8E5XRJ0_9PHAE (50S ribosomal protein L16, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ0_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 6.150e-79
Identity = 116/134 (86.57%), Postives = 127/134 (94.78%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +LSPK+TKFRKQHRGRLKGKA RGN INFG+YAIQALEP W+TSRQIEATRRTITRYTKRGGKLWIT+FPDKPITARAAESRMGSGKGSV+YWVA+VKPG ILFELSGV  K+AKEA++IASYKLPI+TKFL K
Sbjct:    1 MLSPKRTKFRKQHRGRLKGKACRGNKINFGNYAIQALEPAWITSRQIEATRRTITRYTKRGGKLWITIFPDKPITARAAESRMGSGKGSVDYWVAVVKPGSILFELSGVSPKIAKEAMKIASYKLPIRTKFLMK 134          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: A0A2I4Q2I6_9PHAE (50S ribosomal protein L16, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2I6_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 8.450e-79
Identity = 119/134 (88.81%), Postives = 127/134 (94.78%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +LSPKKTKF+KQ RGRLKGKAS GNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKG+++YWVA VKPG ILFELSGV   LAKEA++IASYKLPIKTKF+TK
Sbjct:    1 MLSPKKTKFKKQQRGRLKGKASSGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGALDYWVAKVKPGTILFELSGVNPTLAKEAMKIASYKLPIKTKFITK 134          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: A0A8E5BFH8_9PHAE (Ribosomal protein L16 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BFH8_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.490e-78
Identity = 115/134 (85.82%), Postives = 125/134 (93.28%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +LSPKKT F+KQHRGRLKGKASR NTI+FGDYAIQALEP WLTSRQIEATRRTITRYTKRGGKLWI VFPDKPITAR  ESRMGSGKGSV+YWVAI+KPG +LFELSGVP+ +AKEA++IASYKLPIKTKFL K
Sbjct:    1 MLSPKKTNFKKQHRGRLKGKASRNNTIHFGDYAIQALEPVWLTSRQIEATRRTITRYTKRGGKLWIKVFPDKPITARVPESRMGSGKGSVDYWVAIIKPGTVLFELSGVPINIAKEAMKIASYKLPIKTKFLIK 134          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: B2XTE8_HETAK (50S ribosomal protein L16, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTE8_HETAK)

HSP 1 Score: 235 bits (600), Expect = 6.710e-78
Identity = 112/134 (83.58%), Postives = 127/134 (94.78%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +L PK+TKFRKQHRGRLKGKA RGN I++GDYA+QALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKP+T RAAESRMGSGKG+VEYWVA+VKPG ILFE+SGVPL+LAK A++ ASYKLP+KTKF+T+
Sbjct:    1 MLLPKRTKFRKQHRGRLKGKACRGNKISYGDYALQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPVTFRAAESRMGSGKGAVEYWVAVVKPGKILFEMSGVPLELAKAAMKTASYKLPVKTKFITR 134          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: A0A1G4NTX4_9FLOR (50S ribosomal protein L16, chloroplastic n=2 Tax=Liagoraceae TaxID=31484 RepID=A0A1G4NTX4_9FLOR)

HSP 1 Score: 234 bits (597), Expect = 1.920e-77
Identity = 109/134 (81.34%), Postives = 127/134 (94.78%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +LSPK+TKFRKQHRGRLKGKAS+GNTI+FGDYA+QALEP WLTSRQIEATRRTITRY KRGGKLWI VFPDKP+TAR AE+RMGSGKG+ EYWVA++KPGHILFE++GVP K AK+A+++ASYKLPIKTKF+T+
Sbjct:    1 MLSPKRTKFRKQHRGRLKGKASKGNTISFGDYALQALEPVWLTSRQIEATRRTITRYVKRGGKLWIRVFPDKPVTARPAETRMGSGKGAPEYWVAVIKPGHILFEMNGVPEKAAKQAMKLASYKLPIKTKFITR 134          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: A0A1G4P0N4_9FLOR (50S ribosomal protein L16, chloroplastic n=21 Tax=Nemaliophycidae TaxID=2045258 RepID=A0A1G4P0N4_9FLOR)

HSP 1 Score: 233 bits (594), Expect = 4.990e-77
Identity = 109/134 (81.34%), Postives = 125/134 (93.28%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +LSPK+TKFRKQHRGR+KGKASRGNTI FGDYA+QALEP WLTSRQIEATRRTITRY KRGGKLWI VFPDKP+TAR AE+RMGSGKG+ EYWVA++KPGHILFE++GVP K AKEA+ +ASYKLPI+TKF+T+
Sbjct:    1 MLSPKRTKFRKQHRGRMKGKASRGNTIAFGDYALQALEPVWLTSRQIEATRRTITRYVKRGGKLWIRVFPDKPVTARPAETRMGSGKGAPEYWVAVIKPGHILFEINGVPEKAAKEAMNLASYKLPIRTKFITR 134          
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Match: M4IU60_CALTB (50S ribosomal protein L16, chloroplastic n=4 Tax=Corallinoideae TaxID=48611 RepID=M4IU60_CALTB)

HSP 1 Score: 232 bits (592), Expect = 1.080e-76
Identity = 109/134 (81.34%), Postives = 127/134 (94.78%), Query Frame = 0
Query:    1 VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEATRRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPGHILFELSGVPLKLAKEALQIASYKLPIKTKFLTK 134
            +LSPKKTKFRKQHRGRL+GKAS+GN I+FGDYA+QALEP WLTSRQIEATRRTITRY +RGGKLWI VFPDKP+TARAAE+RMGSGKG+ EYWVA++KPGHILFE++GVP K AK+A+++ASYKLPIKTKF+TK
Sbjct:    1 MLSPKKTKFRKQHRGRLRGKASKGNYISFGDYALQALEPVWLTSRQIEATRRTITRYVRRGGKLWIRVFPDKPVTARAAETRMGSGKGAPEYWVAVIKPGHILFEMNGVPEKDAKQAMKLASYKLPIKTKFITK 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56149.13141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I9LVW6_9PHAE2.370e-8995.5950S ribosomal protein L16, chloroplastic n=1 Tax=P... [more]
D1J745_ECTSI3.540e-8694.0350S ribosomal protein L16, chloroplastic n=6 Tax=P... [more]
A0A0R6M0J1_UNDPI5.650e-8393.1850S ribosomal protein L16, chloroplastic n=49 Tax=... [more]
A0A8E5XRJ0_9PHAE6.150e-7986.5750S ribosomal protein L16, chloroplastic n=1 Tax=I... [more]
A0A2I4Q2I6_9PHAE8.450e-7988.8150S ribosomal protein L16, chloroplastic n=1 Tax=D... [more]
A0A8E5BFH8_9PHAE1.490e-7885.82Ribosomal protein L16 n=1 Tax=Phaeophyceae sp. Tax... [more]
B2XTE8_HETAK6.710e-7883.5850S ribosomal protein L16, chloroplastic n=2 Tax=H... [more]
A0A1G4NTX4_9FLOR1.920e-7781.3450S ribosomal protein L16, chloroplastic n=2 Tax=L... [more]
A0A1G4P0N4_9FLOR4.990e-7781.3450S ribosomal protein L16, chloroplastic n=21 Tax=... [more]
M4IU60_CALTB1.080e-7681.3450S ribosomal protein L16, chloroplastic n=4 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000114Ribosomal protein L16PRINTSPR00060RIBOSOMALL16coord: 42..53
score: 61.67
coord: 58..87
score: 60.93
coord: 24..36
score: 48.92
coord: 88..117
score: 52.93
IPR000114Ribosomal protein L16TIGRFAMTIGR01164TIGR01164coord: 2..127
e-value: 7.3E-60
score: 198.6
IPR000114Ribosomal protein L16PANTHERPTHR1222050S/60S RIBOSOMAL PROTEIN L16coord: 2..134
IPR000114Ribosomal protein L16HAMAPMF_01342Ribosomal_L16coord: 1..134
score: 38.783
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 4..131
e-value: 5.4E-49
score: 165.6
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10coord: 1..136
e-value: 8.0E-54
score: 184.3
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 2..134
IPR020798Ribosomal protein L16, conserved sitePROSITEPS00701RIBOSOMAL_L16_2coord: 82..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56149contigH-paniculata_contig56149:644..1054 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56149.13141.1mRNA_H-paniculata_contig56149.13141.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56149 644..1054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56149.13141.1 ID=prot_H-paniculata_contig56149.13141.1|Name=mRNA_H-paniculata_contig56149.13141.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
VLSPKKTKFRKQHRGRLKGKASRGNTINFGDYAIQALEPTWLTSRQIEAT
RRTITRYTKRGGKLWITVFPDKPITARAAESRMGSGKGSVEYWVAIVKPG
HILFELSGVPLKLAKEALQIASYKLPIKTKFLTKIN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000114Ribosomal_L16
IPR016180Ribosomal_L10e/L16
IPR036920Ribosomal_L10e/L16_sf
IPR020798Ribosomal_L16_CS