prot_H-paniculata_contig5613.13133.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5613.13133.1
Unique Nameprot_H-paniculata_contig5613.13133.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5613.13133.1 vs. uniprot
Match: D8LMF3_ECTSI (DUF676 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF3_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 3.720e-14
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:    1 MPVVGTVDVAVHLHRVHNIDLFCRGVYYLRTSLVLPAK 38
            MPVVGTVDVAVHLHRVHNIDLFCRGVYYLRTS++L +K
Sbjct:    1 MPVVGTVDVAVHLHRVHNIDLFCRGVYYLRTSVLLSSK 38
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5613.13133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMF3_ECTSI3.720e-1489.47DUF676 domain-containing protein n=1 Tax=Ectocarpu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5613contigH-paniculata_contig5613:6088..11869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5613.13133.1mRNA_H-paniculata_contig5613.13133.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5613 6088..11896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5613.13133.1 ID=prot_H-paniculata_contig5613.13133.1|Name=mRNA_H-paniculata_contig5613.13133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
MPVVGTVDVAVHLHRVHNIDLFCRGVYYLRTSLVLPAKVTGGDAINIPPR
NDGGNG
back to top