prot_H-paniculata_contig56.13120.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig56.13120.1
Unique Name	prot_H-paniculata_contig56.13120.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	344

Homology

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BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 4.710e-25
Identity = 53/71 (74.65%), Postives = 61/71 (85.92%), Query Frame = 0

Query:    2 PTYNEMVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKK 72
            PTYN MVF++IK LKERNGSS+QAIKK I  T P L F PHQ+RSALKKG E+GKF+K+K+SYKLSAEAKK
Sbjct:    6 PTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKK 76

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BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.710e-23
Identity = 52/71 (73.24%), Postives = 61/71 (85.92%), Query Frame = 0

Query:    2 PTYNEMVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKK 72
            PTY+ MVF++IKALKER GSS+ A+KK I+ T P L F PHQ+RSALKKGTE+GKF+KVKSSYKLS EAKK
Sbjct:    7 PTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKK 77

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BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 9.920e-23
Identity = 52/66 (78.79%), Postives = 58/66 (87.88%), Query Frame = 0

Query:    7 MVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKK 72
            MVF++IK+LKERNGSS+QAIKK I  T P L F PHQ+RSALKKG ETGKF+KVKSSYKLSAEAKK
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKK 66

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BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.380e-22
Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 0

Query:    1 MPTYNEMVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKK 72
            MPTY+EM   +I ALKERNGSSV AIKKHI  T P L F PHQLR ALKKGTETG F+KVK+SYK+S EAKK
Sbjct:    1 MPTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKK 72

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BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 2.680e-22
Identity = 51/71 (71.83%), Postives = 59/71 (83.10%), Query Frame = 0

Query:    2 PTYNEMVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKK 72
            PTYN MVF++IK LKERNGSS+QAIKK I  T P L F PHQ+R ALKKG E+GKF+K+K+SYKLS EAKK
Sbjct:   99 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKK 169

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BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.610e-21
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = 0

Query:    7 MVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKK 72
            MVF++IK LKERNGSS+QAIKK I  T P L F PHQ+RSALKKG E+GKFVK+K+SYKLSAEAKK
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKK 66

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BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.740e-21
Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 0

Query:    7 MVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSAEAKK 72
            MVF++IKALKER GSS+ A+KK I+ T P L F PHQ+RSALKKGTE+GKF+KVKSSYKLS EAKK
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKK 66

[Close]

BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.220e-19
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0

Query:    1 MPTYNEMVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSA 68
            MPTY+EM  E++KALKERNGSS+ AIKKHI  + P L F  H LRSALKKG E+GKF+KVK+SYKLSA
Sbjct:    1 MPTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLSA 68

[Close]

BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.330e-19
Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 0

Query:    1 MPTYNEMVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLSA 68
            MPTY+EM  E++KALKERNGSS+ AIKKHI  + P L F  H +RSALKKG E+GKF+KVK+SYKLSA
Sbjct:    1 MPTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSA 68

[Close]

BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.570e-16
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0

Query:    7 MVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKKGTETGKFVKVKSSYKLS 67
            MVF++IK LKERNGSS+QA+KK I  T P L F PHQ+RSALKKG ETGKF+KV+ +  L+
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig56.13120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQ80_ECTSI	4.710e-25	74.65	Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
D7G4I5_ECTSI	1.710e-23	73.24	H15 domain-containing protein n=2 Tax=Ectocarpus T...	[more]
D8LQ75_ECTSI	9.920e-23	78.79	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LMF1_ECTSI	2.380e-22	73.61	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KCU1_9PHAE	2.680e-22	71.83	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KST0_9PHAE	1.610e-21	75.76	H15 domain-containing protein n=6 Tax=Ectocarpus T...	[more]
A0A6H5JHR9_9PHAE	2.740e-21	74.24	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JIM8_9PHAE	2.220e-19	70.59	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LJB8_ECTSI	2.330e-19	69.12	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K9S6_9PHAE	2.570e-16	65.57	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 90..104 score: 34.07 coord: 14..31 score: 54.32 coord: 150..169 score: 43.33
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 2..63 e-value: 5.2E-20 score: 82.5
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 2..65 e-value: 2.0E-18 score: 66.5
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 1..68 score: 27.252
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..86 e-value: 1.7E-16 score: 62.2
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 2..140
None	No IPR available	PANTHER	PTHR11467:SF100		coord: 2..140
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 2..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig56	contig	H-paniculata_contig56:47710..49515 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig56.13120.1	mRNA_H-paniculata_contig56.13120.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig56 47524..50730 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig56.13120.1 ID=prot_H-paniculata_contig56.13120.1|Name=mRNA_H-paniculata_contig56.13120.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
MPTYNEMVFESIKALKERNGSSVQAIKKHIVTTNPELVFAPHQLRSALKK
GTETGKFVKVKSSYKLSAEAKKPPPKPKKKLLPKKKVVKKKASTKKPPSK
SRKKVAVAPSAAPAGEGEPSAVLAETQGSGGADGAASGEAPTAEPAAAVL
KKKKAATPKKKAVAGAKVKKAAASVKLKKSPASAKKKPAAIKKKTVTKKK
DGTKAAAKSKKTPVKKKAATTTTPKKKAAAGDKDKDKKKKKTPIKKKLAG
DNDKDKKKKTPVKKKPIVTKKKSATAATSKPAAKKPSVKKIKKPAAAAAA
AAAEPALSSPAPAEPAPPAPPAPAVEDIAAEPATEPAPASTAD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005819	Histone_H5
IPR005818	Histone_H1/H5_H15
IPR036388	WH-like_DNA-bd_sf
IPR036390	WH_DNA-bd_sf