mRNA_H-paniculata_contig56.13117.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig56.13117.1
Unique NamemRNA_H-paniculata_contig56.13117.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 2.460e-119
Identity = 196/302 (64.90%), Postives = 227/302 (75.17%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSM------GLQMRQVKNLPENRAASGDVLRTMTRNTSALWGEAGERPRGGTENGFEQLGRPMNREPFNAHKAEMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSA----AMLSKSL 876
            VAVVVYQHIKTC+W+R+  +ERE++       G +   +K+       S   L  + RN SALWGE G         G E     ++   FNA  AE F E+QFVSP LRY F+ AP MALPG +FTLREVR+ PK+P+VDEIY+FIKTLF+KA LSSECSLVCLIYVERLMETA+VPLL  TWKP+LLCGLLLASKVWQDLSSWNVEFSTVYPE+SLK+INRLELLFLG M+WDMSISSSLYAKYYFALRSL EK+DFRRRYN+V++IDAPRA  V  RA+ V R V +      MLSKSL
Sbjct:   40 VAVVVYQHIKTCQWKRKMAEERERAAAETEPEGSRQDNMKSW----RRSAPSLAALRRNESALWGEGGRDGARWAGGGGEPPSAEVH--GFNAKMAEAFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 335          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 1.540e-107
Identity = 191/309 (61.81%), Postives = 221/309 (71.52%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSMG-------LQMRQVKNLPENRAASGDVLRTMTRNTSALWGEAGERPRGGTENGFEQL----GRPMNREP--FNAHKAEMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSA----AMLSKSL 876
            VAVVVYQHIKTC+W+R+  +ERE++          Q  +V+N  E  +     +R   R                            G P + E   FNA  AE+F E+QFVSP LRY F+ AP MALPG +FTLREVR+ PK+P+VDEIY+FIKTLF+KA LSSECSLVCLIYVERLMETA+VPLL  TWKP+LLCGLLLASKVWQDLSSWNVEFSTVYPE+SLKSINRLELLFLG M+WDMSISSSLYAKYYFALRSL EK+DFRRRYN+V++IDAPRA  V  RA+ V R V +      MLSKSL
Sbjct:  275 VAVVVYQHIKTCQWKRKMAEERERAPAETETEGSRQDMKVENSDEMTSVVVMPVRDGARWPGXXXXXXXXXXXXXXXXXXXXXXXGGGEPSSAEVHGFNAKMAEVFDEQQFVSPTLRYNFMHAPTMALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQIDAPRARMVAARAETVKREVITTQSEMCMLSKSL 583          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.940e-88
Identity = 166/298 (55.70%), Postives = 206/298 (69.13%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSMGLQMRQVKNLPENRAASGDVLRTMTRNTSALWGEAGERPRGGTENGFEQLGRPMN----REPFNAHKAEMFHEKQFVSPQLRYKFVQA--PVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAMLSKSL 876
            VAVVV+QH++ CE R              + +VK     RAA        TR            P GG + G      P+     RE F+  KA++FHE+ +VSP+ R  FV+A     ALP + F + +V T P +PSV+ IY+FI+TLF++ACLSSECSLVCLIY+ERLME A VPLLA TWKP++LCGLLLASKVWQDLSSWNVEFSTVYPEFSL+SINRLE ++L Q++WD+ IS+SLYAKYYFALRSLAE +DFRRRYN V++IDAPRA+RVQER+  +A    +A M SKSL
Sbjct:  245 VAVVVFQHVQNCERR--------------LARVK-----RAAEHPPRPPPTRAPPHA-------PFGGGQPGGVSAPLPVTPGAVREAFDPAKADLFHERHYVSPRYRCTFVRALGAAGALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCVVQIDAPRADRVQERS--LAVREEAAKMFSKSL 514          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: A0A484E3M4_BRELC (Cyclin N-terminal domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3M4_BRELC)

HSP 1 Score: 244 bits (622), Expect = 2.990e-75
Identity = 145/307 (47.23%), Postives = 195/307 (63.52%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRE--------------TDEREKSMGLQMRQVKNLPENRAAS-GDVLRTMTRNTSALWGEAGERPRGGTENGFEQLGRPMNREPFNAHKAEMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAMLSKSL 876
            V+VV+YQHI+ CE R R+              T  R  S  L  ++  N+ ++R     D   T+    SA + E  E    G++N            P      E F E+ FV+PQ +Y FV+ P +  P  V+ + ++ +    PSVDEI+ F K LF+KA LS+EC++VCLIY+ERLME A VPLLAATW+PI++CGLLLASKVWQDLSSWNVE S +YP+FSL+SINRLE LFL  ++WD+ IS+S+YAKYYFALRSL EKKDFRRRYN  M+++ P + R++ER+     +   + + SKSL
Sbjct:   90 VSVVLYQHIRRCEKRHRDQQRSNGVNNVAATFTTNRNASSILFAQRRSNVCDSRPPILTDDTATLVEKESATYFEVDESDEVGSQNPSSLPSPRFVELPVE----ETFREEHFVTPQYKYTFVRLPRLH-PLTVYRMEKITSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEEANVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLQSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRYNYTMRVNPPNSKRLEERS-----AAIKSELYSKSL 386          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: H3GWN2_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GWN2_PHYRM)

HSP 1 Score: 243 bits (619), Expect = 7.090e-75
Identity = 140/289 (48.44%), Postives = 187/289 (64.71%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSMGLQMRQVKNLPENRAASGDVLR-TMTRNTSALWGEAGERPRGGTE-NGFEQLGRPMNREPFNAHKAEMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAM 861
            V+VV+YQHI+ CE R RE              V  L  +     +    T T++T+A   E G+      E N    +  P      +    E F E+ FV+PQ +Y FV+ P +  P  V+ + ++ +    PSVDEI+ F K LF+KA LS+EC++VCLIY+ERLME A VPLLAATW+PI++CGLLLASKVWQDLSSWNVE S +YP+FSL SINRLE LFL  ++WD+ IS+++YAKYYFALRSL EKKDFRRRYN  M++D P + R++ER+  V   + S ++
Sbjct:   96 VSVVLYQHIRRCEKRHREQHRGGGFSNAIAAAVSALTTSEERPNESRSPTPTQDTAAFNDEIGDEDFDRDELNNASSISSPRL---VDLPVEETFREEHFVTPQYKYTFVRLPRVH-PLTVYRMEKITSKRHVPSVDEIFKFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISATVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSKRLEERSAAVKHELYSKSL 380          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: A0A3R7FYU9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FYU9_9STRA)

HSP 1 Score: 239 bits (611), Expect = 4.190e-74
Identity = 119/197 (60.41%), Postives = 154/197 (78.17%), Query Frame = 1
Query:  271 EMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAM 861
            E F E+ FV+PQ +Y FV+ P +  P  V+ + ++ +    PSVDEI+ F K LF+KA LS+EC++VCLIY+ERLME A VPLLAATW+PI++CGLLLASKVWQDLSSWNVE S +YP+FSL SINRLE LFL  ++WD+ IS+S+YAKYYFALRSL EKKDFRRRYN  M++DAP + R++ER+  V   + S ++
Sbjct:  151 ETFREEHFVTPQYKYTFVRLPRVH-PLTVYRMEKITSKHHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRYNYTMRVDAPNSKRLEERSAAVKHELYSKSL 346          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: A0A662XES3_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XES3_9STRA)

HSP 1 Score: 241 bits (614), Expect = 5.480e-74
Identity = 143/297 (48.15%), Postives = 184/297 (61.95%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSMGLQM-------------RQVKNLPENRAASGDVLRTMTRNTSALWGEAGERPRGGTENGFEQLGRPMNREPFNAHKA---------EMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERA 825
            V+VV+YQHI+ CE R RE  +R  S G                   ++  E R  S    R   R   AL  +          NG EQL    N     +  +         E F E+ FV+PQ +Y FV+ P +  P   + + ++ +    PSVDEI+ F K LF+KA LS+EC++VCLIY+ERLME A VPLLAATW+PI+LCGLLLASKVWQDLSSWNVE S +YP+FSL SINRLE LFL  ++WD+ IS+++YAKYYFALRSL EKKDFRRRYN  M++D P + R++ER+
Sbjct:   96 VSVVLYQHIRRCEKRYRE-QQRNASNGFSNAIAAAVSALTASGEGAEHDKEGRPHSHTESRAPLRTEDALTLDDEAEDDDDASNGAEQLNSNSNSASNPSISSPRLVDLPVEETFREEHFVTPQYKYTFVRLPRVH-PLTTYAMEKITSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQADVPLLAATWRPIVLCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISATVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSKRLEERS 390          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: A0A0P1AM49_PLAHL (Cyclin-y-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM49_PLAHL)

HSP 1 Score: 239 bits (611), Expect = 1.460e-73
Identity = 140/297 (47.14%), Postives = 189/297 (63.64%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSMGLQMRQVKNLPENRAASGDVLRTMTRNTSALWGEAGERPRGGTENGFEQLGRP----MNREPFNAHKA------EMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAM 861
            V+VV+YQHI+ CE R RE      S  L      +     A S    R M+   S    E   R   G+   F+ + R      N    ++ +       E F E+ FV+PQ +Y F++ P +  P  ++ + ++ +    PSVDEI+ F K LF+KA LS+EC++VCLIY+ERLME A VPLLAATW+PI++CGLLLASKVWQDLSSWNVE S +YP+FSL SINRLE LFL  ++WD+ IS+S+YAKYYFALRSL EKKDFRRRYN  M++D P + R++ER+  +   + S ++
Sbjct:   94 VSVVLYQHIRRCEKRHREQSRCSGSNNLASLATASSTVVSALSTSDERDMSECRSPTLTEETTRFIEGSLAVFQVVDRDEGSISNPSTVSSPRLVDLPVEETFREEHFVTPQYKYTFIRLPRIH-PLTMYRMEKINSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQASVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSKRLEERSAAIKHELYSKSL 389          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: A0A3M6VRG7_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRG7_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.600e-73
Identity = 138/301 (45.85%), Postives = 191/301 (63.46%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSMGLQ---------MRQVKNLPEN-RAASGDVLRTMTRNTSALW----GEAGERPRGGTENGFEQLGRPMNREPFNAHKAEMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAM 861
            V+VV+YQHI+ CE R RE      + G+          +  +++ P N   +S   L T T +   L      E  E  +         +  P      +    E+F E+ FV+PQ +Y FV+ P +  P  V+ + ++ +    PSVDEI+ F K LF+KA LS+EC++VCLIY+ER+ME A VPL+AATWKPI+LCGLLLASKVWQDLSSWNVE S +YP+FSL SINRLE LFL  ++WD+ IS+++YAKYYFALRSL EKK+FRRRYN  M++D P + R++ER+  +   + S ++
Sbjct:   89 VSVVLYQHIRRCEKRHREQQRNGSTGGMTNAITAAVSALTTLEDRPLNVYGSSNHTLETATFHAETLTCLSDSEGDEDTQELNTTNSSTISSPKL---LDLPVEEIFREEHFVTPQYKYTFVRLPRVH-PMTVYRMEKITSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERVMEQANVPLVAATWKPIVLCGLLLASKVWQDLSSWNVEISNIYPQFSLHSINRLERLFLHHIQWDLYISATVYAKYYFALRSLTEKKNFRRRYNYTMRVDPPNSKRLEERSAAIKHELYSKSL 385          
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Match: M4BM45_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM45_HYAAE)

HSP 1 Score: 238 bits (607), Expect = 6.330e-73
Identity = 142/306 (46.41%), Postives = 193/306 (63.07%), Query Frame = 1
Query:    1 VAVVVYQHIKTCEWRRRETDEREKSMGLQMRQV-------KNLPENRAASG------DVLRTMTRNTSALWGEAGERPRGGTENGFEQLGRPMNREPFNAHKA------EMFHEKQFVSPQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACLSSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWNVEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEKKDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAM 861
            V+VV+YQHI+ CE R RE      S G  +              E++ ++        + RT      AL  + G +  GG      Q    MN    ++ +       E F E+ FV+PQ +Y FV+ P +  P  V+ + ++ +    PSVDEI+ F K LF+KA LS+EC++VCLIY+ERLME A VPLLAATW+PI++CGLLLASKVWQDLSSWNVE S +YP+FSL+SINRLE LFL  ++WD+ IS+++YAKYYFALRSL EKKDFRRRYN  M++D P + R++ER+  V   + S ++
Sbjct:   91 VSVVLYQHIRRCEKRSREQQRSGHSGGSGISNAIAAAVSALTTSEDQVSTACSSPIHSMERTAENEAEALALDFGSKCHGGEIPPEIQT---MNANSISSPRLMDLPVEETFLEEHFVTPQYKYTFVRFPRVH-PMTVYRMAKITSKRHVPSVDEIFRFCKNLFNKAQLSAECTIVCLIYIERLMEQANVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLQSINRLERLFLHHIQWDLYISATVYAKYYFALRSLTEKKDFRRRYNYTMRVDPPNSKRLEERSAAVKHELYSKSL 392          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56.13117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH74_ECTSI2.460e-11964.90Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JJI4_9PHAE1.540e-10761.81Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A835YNR4_9STRA2.940e-8855.70Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A484E3M4_BRELC2.990e-7547.23Cyclin N-terminal domain-containing protein n=1 Ta... [more]
H3GWN2_PHYRM7.090e-7548.44Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A3R7FYU9_9STRA4.190e-7460.41Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A662XES3_9STRA5.480e-7448.15Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A0P1AM49_PLAHL1.460e-7347.14Cyclin-y-like protein n=1 Tax=Plasmopara halstedii... [more]
A0A3M6VRG7_9STRA2.600e-7345.85Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
M4BM45_HYAAE6.330e-7346.41Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56contigH-paniculata_contig56:778..5223 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.8
Seed ortholog evalue4e-95
Seed eggNOG ortholog2880.D7FH74
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of cyclin-dependent protein serine/threonine kinase activity
EggNOG OGsKOG1675@1,KOG1675@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size879
Cds size879
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930593.8134675-CDS-H-paniculata_contig56:777..8941622930593.8134675-CDS-H-paniculata_contig56:777..894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 778..894 +
1691481363.5312366-CDS-H-paniculata_contig56:777..8941691481363.5312366-CDS-H-paniculata_contig56:777..894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 778..894 +
1622930593.825521-CDS-H-paniculata_contig56:1119..13131622930593.825521-CDS-H-paniculata_contig56:1119..1313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 1120..1313 +
1691481363.5432594-CDS-H-paniculata_contig56:1119..13131691481363.5432594-CDS-H-paniculata_contig56:1119..1313Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 1120..1313 +
1622930593.8398216-CDS-H-paniculata_contig56:1920..20771622930593.8398216-CDS-H-paniculata_contig56:1920..2077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 1921..2077 +
1691481363.5531025-CDS-H-paniculata_contig56:1920..20771691481363.5531025-CDS-H-paniculata_contig56:1920..2077Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 1921..2077 +
1622930593.8582163-CDS-H-paniculata_contig56:3156..32611622930593.8582163-CDS-H-paniculata_contig56:3156..3261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 3157..3261 +
1691481363.563716-CDS-H-paniculata_contig56:3156..32611691481363.563716-CDS-H-paniculata_contig56:3156..3261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 3157..3261 +
1622930593.8826194-CDS-H-paniculata_contig56:3876..39531622930593.8826194-CDS-H-paniculata_contig56:3876..3953Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 3877..3953 +
1691481363.574444-CDS-H-paniculata_contig56:3876..39531691481363.574444-CDS-H-paniculata_contig56:3876..3953Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 3877..3953 +
1622930593.9075353-CDS-H-paniculata_contig56:4613..47491622930593.9075353-CDS-H-paniculata_contig56:4613..4749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 4614..4749 +
1691481363.5897987-CDS-H-paniculata_contig56:4613..47491691481363.5897987-CDS-H-paniculata_contig56:4613..4749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 4614..4749 +
1622930593.9244344-CDS-H-paniculata_contig56:5130..52231622930593.9244344-CDS-H-paniculata_contig56:5130..5223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 5131..5223 +
1691481363.6048038-CDS-H-paniculata_contig56:5130..52231691481363.6048038-CDS-H-paniculata_contig56:5130..5223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig56 5131..5223 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56.13117.1prot_H-paniculata_contig56.13117.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig56 778..5223 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig56.13117.1

>prot_H-paniculata_contig56.13117.1 ID=prot_H-paniculata_contig56.13117.1|Name=mRNA_H-paniculata_contig56.13117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=293bp
VAVVVYQHIKTCEWRRRETDEREKSMGLQMRQVKNLPENRAASGDVLRTM
TRNTSALWGEAGERPRGGTENGFEQLGRPMNREPFNAHKAEMFHEKQFVS
PQLRYKFVQAPVMALPGAVFTLREVRTVPKSPSVDEIYDFIKTLFSKACL
SSECSLVCLIYVERLMETAQVPLLAATWKPILLCGLLLASKVWQDLSSWN
VEFSTVYPEFSLKSINRLELLFLGQMRWDMSISSSLYAKYYFALRSLAEK
KDFRRRYNQVMKIDAPRANRVQERADDVARSVTSAAMLSKSL*
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mRNA from alignment at H-paniculata_contig56:778..5223+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig56.13117.1 ID=mRNA_H-paniculata_contig56.13117.1|Name=mRNA_H-paniculata_contig56.13117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4446bp|location=Sequence derived from alignment at H-paniculata_contig56:778..5223+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCGCGGTGGTGGTTTACCAGCACATCAAGACGTGCGAGTGGAGACGCCG GGAGACGGACGAGCGGGAGAAATCAATGGGATTGCAAATGCGGCAGGTGA AGAATCTTCCCGAGAACGTTCTGCGAGAAATCTGAGAAATTTCGAGGCGG AGGGTATCTAGTGGGTTGGTGGAGACTTGTGCCTGGATTTCCATTTCCAA TTTCGGGGCAAACCAGAGCTGTTCCCTTAAGCCCGTCCGCCCCCTCTGCC CCGTGTGCTTACTGTGTCTATTTCTCTCCTTGGTGTTTACTCTATTCTGC ATCATCGCTTGTCTACACCGACACCTCAAAAATGCGGAATAGCGAGCTGC GTCGGGAGATGTTCTACGCACCATGACGAGAAACACCAGTGCGCTGTGGG GAGAGGCTGGAGAGAGGCCTCGGGGAGGTACGGAGAATGGCTTCGAGCAG CTGGGAAGGCCGATGAACCGGGAACCCTTCAACGCGCACAAGGCGGAGAT GTTTCACGAGAAGCAGTTCGTGTCTCCTCAGCTCAGGTAACGGCTTGTAC TTTGGGCCCGGCCCGGTCCGGTCCCGTTCGCATTTTTGTGTGCCTGAGTA GTGTCGGGGTGTTTTGGGTGATGGTTCCGGCAGGACGGTGTTTCAGTCTT GGTATGTGTATGTTTCGATTCGTGGGAGCCTTGCTGTGTGCTTTTTGTTT TGTGGCAACAGTATACTGTGGGTGGTGTGAAAGGATGCCCGTATGTATCA TGTGTGTATTGTACGGATGTGTGTATGTTGGTTTGATTTTTGTTTTGTAA TGCGGTTGTGTGTTCTGATTGATGTTCGTCTCGTGTGTGACCTGCTTGTG TCGTGAAGTTGTTTTGTTATGGGTTTTCGAGCCTGTCGATATGTGTATCA TTCATTCACGCGGCCCGTGTTTTCTCTTTTTTGTTTTTCTTGAAATTATT CTCGCGTCTGATTTTTTCTCTTGTGGTTATTACGGTAGCCCGACGTGTGT GTCTAGTTTGTCCTGTCTTTTTTCTGAAACCCCACGAAGCAAAGGACAAA AGTTAGCGTGCTGTATATTGTTGTGCTTTACATGCGTACATCTGCGGGCT TATCGAACTGTCTTAACTTTTTTATATGTTTTCCCACCATAAGGTACAAA TTTGTTCAAGCGCCCGTCATGGCCTTGCCGGGAGCAGTGTTCACCCTTCG TGAAGTCCGCACCGTGCCCAAATCGCCCTCCGTCGACGAGATCTACGACT TCATCAAGACGCTCTTCAGCAAGGCCTGCCTTAGCAGCGAGTGCTCTCTG GTGAGTTGCTGCTGTTTGCGTGCTCGTTTCTTTGCATGGAGCAAGTTCGT GTATTTTTGTGTATTTTTGGTGCTCCGTTGGAAATGCAATAATTTTTCTT CGAACAGCCACGTTGAACACTGGCCGCCAGGATTCTTAGGTCAAGAGTAC ACCCCCTGGACAAAACACGAACACTTGCAAATGGTTTTGACCCAAAATTG AGAAAGTAGTAGTCTGAATTTCAGAATAAGCGGACACGTGAAATATAGTA TCCACCCGTCTCCGTTCGATTCGCGAGAATTATTAATAGTCGTGGATGGT CCTGGGCACATTGAAAACACGAGCTCATTCTGAAACTCGGGCGAATACTT TCGGGTTTTTTGTGAAAATTATTTGCAAGTATTCGTGCTTGTCCCGGGGG TGCCAGATTGTCAAACATTTAAGAGCCTACTTCGCCATCCTGGTCTCCCA ATTTCAGTGTCATTGCACTTGAGTCTACTGGTCCTCCTGCTGCATTTGGT GCACGACCATCAACCAACACATGGAACTGTTTCTTATCGCATAGCCCGCA TATAACCAACCTTCCAACCTATTGTACTCGTTGGACTCTTGAGTGGGGCC TGGATCAAGAACCGGGAGAAGCTGTTCGACATAGCATTCGTAAGACGTCT GTACTTGGCATGGTAAAGACAGTAGCGATCAATCGCGGTGTGACCTCATT CATGGATAGTTTTGTCATGAGGAGGCTGCGCTCAAGTTTTTGATTGGAGT CGCAAAATCACTCTCCTTGATTGTGTAAAGTTTGGGATTCCATTAGATGA TAATCTATATTCTGCGCAAGGTTGAAATACACGCGGTATCGAGAATTTCT GTGCGACTTTGTGCTCTCTTGGATCCTTGAGAGAAAATGATCTGTTAGTG TTATTATTATTATTATTATTATTATTTCTTGGAACGCTAGCGCTTGCGTT GCGTTGAAAATGAATGTACAGGAAAAATCCATGTGCACTAAATCGGGAAA CCATCATTGCAAATGTACTCGATTAGTGTTGACGCACGTGCGTCTTGTTT TGTCGTGACTGCCCGAAAACTACACTCAGGTGTGTCTGATCTACGTCGAG CGGCTGATGGAGACGGCTCAGGTCCCATTGCTAGCAGCCACCTGGAAGCC TATCCTGCTCTGCGGTCTCCTGCTAGCCTCCAAGGTGATGGAATAGTTTT GCAACTTCCAACCGAAATCATTCTATTGAGTAGCACAAAAATATAATGTT GACATTGTCATCACTTTTCTTGTTTTATTTACTGTCTGGGCTCGTCGGGT CAGAGATTGTACAAGGCATGCATAATTGTTGCTCGGAGCCGCTGTTGTTC CGTTGTTAACCTCGTGCGGGAAAGGGATATATGTGTACAATGGTTGCGAT TCATTGCTGTTGTAGTTTTTTTTTTCCAGAATTCCGAATGTCCGCCTTCA CCGTCTCCCCGCTGTGTAGCTGGCGAAAAACGAAATGCTCAGTTTTGAAG AATTATTATAGAAATGCACCAAAATGACCCAACCTTACCGAGTGTAGCAG AGAGGTGCATCACCCAATGCCTAAACAGGAAGTAGTAGGTCGTGAAAACG TTGTTTTGTTTTTTCGGAAATTGGGAAAATTCTTAAGTCCAAATAGGCAA AAACTATGAGTTGGGCTTCATCCCTGCGCCCATCCCCGATTGTGTTGTGG ATAGGATATTTACTCAGCCGTGTCGTTCGCTTGTGCAGCATTTTGTGTTG ATGGATCACTTGCCACACGATGCTTGCGATGGCGTGTCTATTTGTACAGG TGTGGCAGGACCTGAGCAGCTGGAACGTGGAATTTTCCACCGTTTATCCG GAATTCTCTCTCAAGAGCATTAATCGGTGAGGAAGAGGAGGGGCACAAGA CACTCACGAGAGTTTTTTGTGCTTGAGCAAAAAATGAAAACAAGGATGAA ATAAAATAGTTTCGTTGCTATGTACGTCCAGTTACGATTTTCTTTTCTGT GCGTAAACTGCGTTTCTTTTCCCGCTTCAATTTATCGATTCTAGTGTACA CAGAGACTGAACACTGTAGCATGATAAACCAAAGCTTGGCACGACCTACC GCGGGCGTGTTGTATCGTTGGTAGAGCGTAAATCTGGTGTTTAAATTCGT TTTCAGAACGTATATTTGGCTAACAGCGTTGGCAGCACACATCTGATCGA TTGTAAGGTGTAGGGGTGTTGGGTGTCTGGAGTTCCTGACGTAGTCTCTC AGCGTGTATTGTCGTTGTCCAAGGGTGTGGATATATATATAGTTCCTTGC ACTTCCTAGTGTGCATATATATATACGTATATTCCAGTTTAACTCCCCCC TCTCCCACTTTTTTTGCGTAGTCTTCGTTTTCGTGTTTTCAGGCATACCT ATCACTGTTGTATGTACTTGCTTCTTGTTTATCATGATTGCTTCGCGTGT TCTTGTTGGGCTGTTGCCTCGAGCCTTTTTTTTTACGCAATGTATATATA CATGATGCCTACTTTTGTCGTTTTTGCGTTTGTCAGGCTGGAATTACTAT TCCTCGGACAGATGAGGTGGGACATGTCGATCTCAAGCAGCCTGTACGCT AAGTACTACTTCGCTCTGCGATCGCTCGCTGAAAAGAAAGACTTTAGGAG GCGGTACAACCAGGTCATGAAGGTGAACGGAGAACCTTTTGTGTGCATTC GCTATCCCCTCCCCTCAGTTGTTTCAAGTGTAGTGATCAATGTACCGACA ATATAGCCGCAGTTTTCGGTTACATGGCCTCGAGCATCCGTGTATACCAA AATATTACAATACGTTGCAGGCAATAATTCCATTACAGAAAACTTGTCGA CCGATCAGAAATAGGGTCCGCATGTCAGACGTATATCGTGGCGTTCGGAC TTTATATTCTTTATACTTGTTTTCGGATGTTTGTCGGCGTTTTTGTACGG GGGAAGCGGGGTTATTGATGCCCCCCCCCCTCCCCCAGGATCAAACCCGA AGCCAGCACTCAACGTGTCTTTTTTCCGTTAAAAATAAATTCCGTGTGCA CAGATCGACGCGCCACGAGCCAACAGAGTGCAAGAGCGAGCGGATGATGT GGCCCGTTCCGTTACGTCTGCAGCGATGCTCTCCAAGAGCCTCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig56:778..5223+

>mRNA_H-paniculata_contig56.13117.1 ID=mRNA_H-paniculata_contig56.13117.1|Name=mRNA_H-paniculata_contig56.13117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1758bp|location=Sequence derived from alignment at H-paniculata_contig56:778..5223+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCGCGGTGGTGGTTTACCAGCACATCAAGACGTGCGAGTGGAGACGCCG
GGAGACGGACGAGCGGGAGAAATCAATGGGATTGCAAATGCGGCAGGTGA
AGAATCTTCCCGAGAACGTCGCGGTGGTGGTTTACCAGCACATCAAGACG
TGCGAGTGGAGACGCCGGGAGACGGACGAGCGGGAGAAATCAATGGGATT
GCAAATGCGGCAGGTGAAGAATCTTCCCGAGAACCGAGCTGCGTCGGGAG
ATGTTCTACGCACCATGACGAGAAACACCAGTGCGCTGTGGGGAGAGGCT
GGAGAGAGGCCTCGGGGAGGTACGGAGAATGGCTTCGAGCAGCTGGGAAG
GCCGATGAACCGGGAACCCTTCAACGCGCACAAGGCGGAGATGTTTCACG
AGAAGCAGTTCGTGTCTCCTCAGCTCAGCGAGCTGCGTCGGGAGATGTTC
TACGCACCATGACGAGAAACACCAGTGCGCTGTGGGGAGAGGCTGGAGAG
AGGCCTCGGGGAGGTACGGAGAATGGCTTCGAGCAGCTGGGAAGGCCGAT
GAACCGGGAACCCTTCAACGCGCACAAGGCGGAGATGTTTCACGAGAAGC
AGTTCGTGTCTCCTCAGCTCAGGTACAAATTTGTTCAAGCGCCCGTCATG
GCCTTGCCGGGAGCAGTGTTCACCCTTCGTGAAGTCCGCACCGTGCCCAA
ATCGCCCTCCGTCGACGAGATCTACGACTTCATCAAGACGCTCTTCAGCA
AGGCCTGCCTTAGCAGCGAGTGCTCTCTGGTACAAATTTGTTCAAGCGCC
CGTCATGGCCTTGCCGGGAGCAGTGTTCACCCTTCGTGAAGTCCGCACCG
TGCCCAAATCGCCCTCCGTCGACGAGATCTACGACTTCATCAAGACGCTC
TTCAGCAAGGCCTGCCTTAGCAGCGAGTGCTCTCTGGTGTGTCTGATCTA
CGTCGAGCGGCTGATGGAGACGGCTCAGGTCCCATTGCTAGCAGCCACCT
GGAAGCCTATCCTGCTCTGCGGTCTCCTGCTAGCCTCCAAGGTGTGTCTG
ATCTACGTCGAGCGGCTGATGGAGACGGCTCAGGTCCCATTGCTAGCAGC
CACCTGGAAGCCTATCCTGCTCTGCGGTCTCCTGCTAGCCTCCAAGGTGT
GGCAGGACCTGAGCAGCTGGAACGTGGAATTTTCCACCGTTTATCCGGAA
TTCTCTCTCAAGAGCATTAATCGGTGTGGCAGGACCTGAGCAGCTGGAAC
GTGGAATTTTCCACCGTTTATCCGGAATTCTCTCTCAAGAGCATTAATCG
GCTGGAATTACTATTCCTCGGACAGATGAGGTGGGACATGTCGATCTCAA
GCAGCCTGTACGCTAAGTACTACTTCGCTCTGCGATCGCTCGCTGAAAAG
AAAGACTTTAGGAGGCGGTACAACCAGGTCATGAAGGCTGGAATTACTAT
TCCTCGGACAGATGAGGTGGGACATGTCGATCTCAAGCAGCCTGTACGCT
AAGTACTACTTCGCTCTGCGATCGCTCGCTGAAAAGAAAGACTTTAGGAG
GCGGTACAACCAGGTCATGAAGATCGACGCGCCACGAGCCAACAGAGTGC
AAGAGCGAGCGGATGATGTGGCCCGTTCCGTTACGTCTGCAGCGATGCTC
TCCAAGAGCCTCTGAATCGACGCGCCACGAGCCAACAGAGTGCAAGAGCG
AGCGGATGATGTGGCCCGTTCCGTTACGTCTGCAGCGATGCTCTCCAAGA
GCCTCTGA
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