mRNA_H-paniculata_contig5598.13115.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 377 bits (968), Expect = 2.630e-111 Identity = 200/478 (41.84%), Postives = 290/478 (60.67%), Query Frame = 1
Query: 979 FSRRDRFLAVKRGDISVVLPWLMACTEVAAIRRPSTA------------GSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAV--PSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIATK 2367
+R+ R+ ++KRGDIS VLPWL+ CT+ A+ R +A CRH GG+ +AAR ++D+ + N++T+ ++ AKF ED + A K ASR WRP+ E++ + L+ V+ S+++ S AG+DG RFSHL+ I+NT G+E F + S WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV V+GG E + + A+ HQ G+W++ DC+N FN+ KR +I+ + P L ++A+CY+E A I+ MD+GE R I +G+ GDG+G LFC + IV K R +++ LGV L AY+DD+ L ++T + + I LV EL VG+ +N K+ A+ P + P ER L G+ IAE G+ VV G PIGTDA+V+ A+ V+ E GA+ LAR+LV MPDKQ A L+ ++
Sbjct: 267 IARKKRYNSLKRGDISSVLPWLIECTKAASARSRGSAREDTPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRL--LGDAGLPIAEEGITVV-GVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQ 741
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 374 bits (959), Expect = 3.990e-111 Identity = 204/478 (42.68%), Postives = 287/478 (60.04%), Query Frame = 1
Query: 979 FSRRDRFLAVKRGDISVVLPWLMACTEVAAIR--------RPST----AGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNH--TPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIATK 2367
+R+ R+ ++KR DIS VLPWL+ T+ A+ R RP A CRH GG+ +AAR ++D+ + N++T+ ++ AKF ED + A ASR WRP+ E++ + L+ VV +++ S AG+DG RFSHL+ I+NT G+E F + S WRR ++ P AFPPEFW L +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV V+GG E + + A+ HQ G+W++ DC+N FN+ KR +I+ + P L ++A+CY+E A I+ MD+GE R I +G+ GDG+G LFC + IV K R +++ LGV L AY+DD+ L D+T + + LV EL VG+ +N K+ A+P H TPTER L G+ IAE G+ VV G PIGTDA+V+ A+ V+ E GAE LARLLV MPDKQ A L+ ++
Sbjct: 245 IARKHRYKSLKREDISSVLPWLIEYTKAASARSRGPAREDRPDDKFKRAAQACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRP--LGDAGLPIAEEGITVV-GVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQ 719
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 375 bits (964), Expect = 7.730e-108 Identity = 200/476 (42.02%), Postives = 288/476 (60.50%), Query Frame = 1
Query: 979 FSRRDRFLAVKRGDISVVLPWLMACTEVAAIR-----RPST-------AGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIATK 2367
+R+ R+ ++KRGDIS VLPWL+ T+ A+ R R T A CRH GG+ +AAR ++D+ + N++T+ ++ AKF ED + A ASR WRP+ E++ + L+ V+ S+++ S AG+DG RFSHL+ I+NT G+E F + S WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV V+GG E + + A+ HQ G+W++ DC+N FN+ KR +I+ + P L ++A+CY+E A I+ MD+GE R I +G+ GDG+G LFC + IV K R +++ LGV L AY+DD+ L ++T + + I LV EL VG+ +N K+ A+P H T E L G+ IAE G+ VV G PIGTDA+V+ A+ V+ E GA+ LAR+LV MPDKQ A L+ ++
Sbjct: 246 IARKKRYNSLKRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVV-GVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQ 720
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 368 bits (944), Expect = 1.030e-102 Identity = 194/478 (40.59%), Postives = 295/478 (61.72%), Query Frame = 1
Query: 979 FSRRDRFLAVKRGDISVVLPWLMACTEVAAIR------------RPSTAGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAA---WRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIAT 2364
+R++R+ A+KRGDIS LPWLM + A+ R + A CRH GG+ +AAR +++ + N++T+ ++ AKF ED+ AA + AV A +S+ + + WRP++E++ + LI V+ S+++ S AG+DG RFSHL+ I NT G+E F + S WRR + P+ FPPEFW L+ +L ALGEKCRP C G RR +A G VRQ+ PKLE E Q+GV V+GG E + + A+ HQ G W+I DC+N FN+ KR +I+ + P L ++A+CY+E A +++MD+GE R + +G+ GDG+G LF + + I+ K +++++ LGV AY+DD+ L + DLTE+++ A+ LV ELA VG+ +N K+ A+P H T+++ L +G+ +A G+ VV G PIGTD +V++ A+ V+ E GAE LAR+L M D+Q A LI +
Sbjct: 416 ITRKERYKALKRGDISSTLPWLMEYAKAASSRSRGPVQEETQEDKFKRAEQACRHSGGVKDAARALLAEPRSPGNDETWERLKAKFPLEDS---AAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVAGEGITVV-GVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITS 889
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE) HSP 1 Score: 333 bits (855), Expect = 2.150e-100 Identity = 173/418 (41.39%), Postives = 250/418 (59.81%), Query Frame = 1
Query: 1087 AGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPD 2337
A CRH GG+ +AAR ++D+ + N++T+ ++ AKF ED + A ASR WRP+ E++ + L+ V+ +++ S AG+DG RFSHL+ I+N G+E F + WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV V+GG E + + A+ HQ G+W++ DC+N FN+ KR +I+ + P L ++A+CY+E A I+ MD+G R I G+ GDG+G LFC + I+ K R +++ LGV L AY+DD+ L ++T + + I LV EL VG+ +N K+ A+P H T E L G+ IAE G+ VV G PIGTDA+V+ A+ V+ E GA+ LAR+LV MPD
Sbjct: 16 AARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVV-GVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPD 432
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE) HSP 1 Score: 322 bits (824), Expect = 7.830e-92 Identity = 191/520 (36.73%), Postives = 273/520 (52.50%), Query Frame = 1
Query: 1015 GDISVVLPWLMACTEVAAIR-----RPST-------AGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRC-ILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPF-------------------------------------------------------NSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIATK 2367
G IS VLPWL+ T+ A+ R R T A CRH GG+ +AAR ++D+ + N++T+ ++ AKF ED + A ASR WRP+ E++ + L+ V+ S+++ S AG+DG FSHL I+NT G+E F + S WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV +G E + + A+ HQ G+W++ DC+N F N+ KR +I+ + P L ++A+CY+E A I+ MD+GE R I +G+ GDG+G LFC + IV K R +++ LGV L AY+DD+ L ++T + + I LV EL VG+ +N K+ A+P H T E L G+ IAE G+ VV G PI TDA+V+ A+ V+ E GA+ LAR+LV MPDKQ A L+ ++
Sbjct: 228 GVISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVV-GVPIETDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQ 746
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 303 bits (775), Expect = 3.330e-86 Identity = 157/347 (45.24%), Postives = 220/347 (63.40%), Query Frame = 1
Query: 1333 VVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLI-LAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIATK 2367
V+ S+++ S AG+DG RFSHL+ I+NT G+E F + S WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV V+GG E + + A+ HQ G+W++ DC+N FN+ KR +I+ + P L ++A+CY+E A I+ MD+GE R I +G+ GDG+G LFC + IV K R +++ LGV L AY+DD+I L ++T + + I LV EL VG+ +N K+ A+P H T E L G+ IAE G+ VV G PIGTDA+V+ A+ V+ E GA+ LAR+LV MPDKQ A L+ ++
Sbjct: 7 VINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVV-GVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQ 352
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE) HSP 1 Score: 307 bits (787), Expect = 2.940e-84 Identity = 176/466 (37.77%), Postives = 250/466 (53.65%), Query Frame = 1
Query: 1009 KRGDISVVLPWLMACTEVAAIR-----RPST-------AGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIATK 2367
KRGDIS VLPWL+ T+ A+ R R T A CRH GG+ +AAR + D+ + N++T+ ++ AKF ED + A ASR WRP+ E++ + L+ V+ S+++ S AG+DG RFSHL+ I+NT G+E F + S WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV +GG E + + A+ HQ G+W++ DC+N FN KR + + + P L ++A+CY+E A I+ MD+GE R I +G+ GDG+G LFC + IV K R +++ +G ++ TP ER L G+ IAE G+ VV G IGTDA+V+ A+ V+ E GA+ LAR+LV MPDKQ A L+ ++
Sbjct: 264 KRGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLVDQTSPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNMGKRTATMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHIGHDV-------------------------------------------------TPAERRL--LGDPGLPIAEEGITVV-GVLIGTDAYVEDFAMKVITEGGADKLARMLVRMPDKQVAHLVTSQ 677
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE) HSP 1 Score: 293 bits (750), Expect = 9.410e-82 Identity = 173/476 (36.34%), Postives = 247/476 (51.89%), Query Frame = 1
Query: 979 FSRRDRFLAVKRGDISVVLPWLMACTEVAAIR-----RPST-------AGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALGVELLAYLDDLILAMGDLTEDTLWAIHFLVQELARVGVQINNVKTKAVPSMNHTPTEREAAALAAMGINIAEGGVCVVVGTPIGTDAFVQQHAVTVVKEKGAEHLARLLVHMPDKQAAMLIATK 2367
+R+ RF RGDIS VLPWL+ T+ A+ R R T A CRH GG+ +AA ++D+ + N++T+ ++ AKF ED + A TASR WRP+ E++ + + V+ +++ S A +DG RFSHL I+NT G+E F + S WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV V+GG E + + A+ HQ G+W++ DC+N FN+ KR +I+ + P L ++A+CY+E A I+ MD+GE R I +G+ GDG+G LFC + IV K R + +GD G+ IAE G+ +V G PIGTDA+V+ A+ V+ E GA+ LAR+LV MPDKQ A L+ ++
Sbjct: 200 IARKKRF----RGDISSVLPWLIEYTKAASARSRGPAREDTPDDKFKRAAQACRHSGGVKDAASAPLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAITASRTEEEEGSAPRWRPETEFDPQVFLQVINRRSSNSGADNDGQRFSHLTSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKR----------------LLGD------------------------------------------------AGLPIAEEGITIV-GVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQ 606
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE) HSP 1 Score: 282 bits (722), Expect = 2.090e-77 Identity = 144/353 (40.79%), Postives = 209/353 (59.21%), Query Frame = 1
Query: 979 FSRRDRFLAVKRGDISVVLPWLMACTEVAAIR-----RPST-------AGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAKFGKEDARALAAAKVAVKTASRDSLAASGDAAWRPDDEYNSETLIAVVKSKNALSAAGSDGLRFSHLRCILNTSAGKEGFGLVIGSFWRRSMEQPDAFPPEFWELFLHRNLTALGEKCRPTCAGSMIRRTLAPGVVRQYSPKLEVNLSEW-QYGVTVSGGTELMGLRAKAHHQLGYWLIALDCTNPFNSVKRASILEEVEIRTPGLTPFLAKCYEEKLADIIFQMDTGEHRKI*SNTGIH*GDGLGSTLFCIPVGSIVRKCREQFEALG 1998
+R+ R+ KRGDIS LPWL+ T+ A+ R R T A CRH GG+ +AAR ++D+ + N++T+ ++ AKF +ED + A ASR WRP+ E++ L+ V+ S+++ AG+DG RFSHL+ I+NT G+E F + S WRR + P+AFPPEFW L+ +L ALGEKCRP C G RR +A G VR++ PKLE E Q+GV V+GG E + + A+ HQ G+W++ DC+N FN+ KR +I+ + P L ++A+CY+E A I+ MD+GEHR I +G+ GDG+G LFC + IV K R +++ LG
Sbjct: 253 IARKKRYNWFKRGDISSALPWLIEYTKAASARSRGPAREDTPDDKFKRAARACRHSGGVKDAARALLADQPSPGNDETWARLKAKFTREDPVQVEQANAEAIAASRTEEEEGSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLG 605 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5598.13115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5598.13115.1 >prot_H-paniculata_contig5598.13115.1 ID=prot_H-paniculata_contig5598.13115.1|Name=mRNA_H-paniculata_contig5598.13115.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=283bp MACTEVAAIRRPSTAGSTCRHKGGISNAARVFMSDEVASANEDTFGKVSAback to top mRNA from alignment at H-paniculata_contig5598:10339..13671+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5598.13115.1 ID=mRNA_H-paniculata_contig5598.13115.1|Name=mRNA_H-paniculata_contig5598.13115.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3333bp|location=Sequence derived from alignment at H-paniculata_contig5598:10339..13671+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5598:10339..13671+ >mRNA_H-paniculata_contig5598.13115.1 ID=mRNA_H-paniculata_contig5598.13115.1|Name=mRNA_H-paniculata_contig5598.13115.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1698bp|location=Sequence derived from alignment at H-paniculata_contig5598:10339..13671+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |