prot_H-paniculata_contig5598.13114.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5598.13114.1
Unique Nameprot_H-paniculata_contig5598.13114.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length516
Homology
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BLAST of mRNA_H-paniculata_contig5598.13114.1 vs. uniprot
Match: A0A6H5L9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9V8_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.630e-31
Identity = 120/251 (47.81%), Postives = 129/251 (51.39%), Query Frame = 0 
Query:  294 HMTGVXXXXXXXXMVGPRGPMPPQQFQQHIYRTPMGQPQQMFMQPPPAGMRMPMAP-QHQGFPPQGVPMMGQPGTPGRPPGSPFFHPQMQMGPIPPMAQGSPMAQGQQQQ----------------------------RGFAMMPGHPGAGAPPPPPHQGPPQTPPQPQRPGSGGVMMGMGPGMXXXXXXXXSGGPHDHGGECHGDDMGGGHARRGRXXXXXXXXXXXXXXXGLSRQNSANRKHHRGGSTG 515
            HM GV        M G RGPMPPQQF Q +YR  MGQP QMFMQPP    RMPMAP Q QGFPPQG+ ++GQPG    PPGSPF+H QMQM                                               RGF MMPGHPGAG  PP              RPG+ G M GM PG XXX        PH+HGG+ HGDD GGGH+RRGR    XXXXX         RQNSANRKH RGGS G
Sbjct:   43 HMAGVVPPHV---MAGARGPMPPQQFPQPMYRAAMGQPPQMFMQPP----RMPMAPGQIQGFPPQGIQVVGQPGGAAPPPGSPFYHGQMQMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXRGFPMMPGHPGAGGAPPXXXXXXXXXXXXXXRPGNAGGMGGMRPGXXXX--------PHEHGGDGHGDDSGGGHSRRGRGGGRXXXXX-------XXRQNSANRKH-RGGSGG 270
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BLAST of mRNA_H-paniculata_contig5598.13114.1 vs. uniprot
Match: D7FVW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW5_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 5.990e-20
Identity = 68/142 (47.89%), Postives = 74/142 (52.11%), Query Frame = 0 
Query:  307 MVGPRGPMPPQQFQQHIYRTPMGQPQQMFMQPPPAGMRMPMAP-QHQGFPPQGVPMMGQPGTPGRPPGSPFFHPQMQMGPIPPMAQGSPMAQGQQQQRGFAMMPGHPGAGAPPPPPHQGPPQTPPQPQRPGSGGVMMGMGPG 447
            M G RGPMPPQQF Q +YR  MGQP QMFMQPP    RMPMAP Q QGFPPQG+ ++GQPG    PPGSPF+H QM                                             QTPPQPQRPG+ G M GM PG
Sbjct:    1 MAGARGPMPPQQFPQPMYRAAMGQPPQMFMQPP----RMPMAPGQIQGFPPQGIQVVGQPGGAVPPPGSPFYHGQM---------------------------------------------QTPPQPQRPGNAGGMGGMRPG 93
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5598.13114.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L9V8_9PHAE1.630e-3147.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVW5_ECTSI5.990e-2047.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5598contigH-paniculata_contig5598:1538..7547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5598.13114.1mRNA_H-paniculata_contig5598.13114.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5598 1458..8665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5598.13114.1 ID=prot_H-paniculata_contig5598.13114.1|Name=mRNA_H-paniculata_contig5598.13114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=516bp
MGYRGVESPEHQGHAQQQLHPNMHPSPHHHGHHPHAQSQHSQQAQVPPYT
PLQQYPHPSQQHQPQQHGHQTHVPQHGSQQQHHQQQHGPPPQHPSTPLQQ
GHQHPSQMQQTPPHSQHQHQHQHSQQVQHGGPHPVPPQPHTNVIPPPSPS
RGQHPPPHGAHAGHLPHSGQHGQPHAPPAHGQGPHVGQQPHGGGQPPHGA
QPPPHGGPSSAPHGGQHIDRQQQQQPQQQAQQQGQQHPPAQPGTPQQAAA
AAAAGGAPQQMVVSQYSPAAGMPAQMAAAAATGGTATPGGAHPHMTGVPP
GAHPAHMVGPRGPMPPQQFQQHIYRTPMGQPQQMFMQPPPAGMRMPMAPQ
HQGFPPQGVPMMGQPGTPGRPPGSPFFHPQMQMGPIPPMAQGSPMAQGQQ
QQRGFAMMPGHPGAGAPPPPPHQGPPQTPPQPQRPGSGGVMMGMGPGMPG
SGGRMGSGGPHDHGGECHGDDMGGGHARRGRGGGGSGGGGRGGRGGGLSR
QNSANRKHHRGGSTG*
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