mRNA_H-paniculata_contig5593.13109.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5593.13109.1
Unique NamemRNA_H-paniculata_contig5593.13109.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: D7FJG1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG1_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.210e-54
Identity = 98/179 (54.75%), Postives = 122/179 (68.16%), Query Frame = 2 
Query:   29 VKHLSCPRCRSVLIIPRAERFRCQCQLVFR-----VTGTNKIQLCLNSRNGGDTDGQECGLPRALVERMPITIGKFDEEACAALT-QGTDS-----------EDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDVSEALTGSSGVAFLTAVEGNPMPFLDR 514
             KHLSCPRCR +LI+P  + FRC C LVF      V GT  +QLC  S +  +  GQ CGLPR LVER+P+T+    EE CA    Q  D+           +D + +CRICLSDY+ GD VR+LPCFHRFH SEIDDWL+RN  CPLC+LD+S+ALTGSSGVAF++ +EGNP P ++R
Sbjct:   22 TKHLSCPRCRRLLIVPNVDTFRCHCSLVFSKVRDAVGGT--MQLCF-SLSEQELHGQGCGLPRELVERLPVTV--VTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRNVCCPLCHLDISKALTGSSGVAFVSVIEGNPRPVIER 195
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: A0A4D9D6F5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6F5_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.640e-12
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 2 
Query:  278 DSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLC 424
            DS D + SCRICL DY  GD +RVLPCFHRFHA    DWL R  TCPLC
Sbjct:  122 DSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRKKTCPLC 170
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 5.240e-12
Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = 2 
Query:   20 EDTVKHLSCPRCRSVLIIPRAER------FRCQCQLVFRVTGTNKIQLCLNSRNGG---DTDGQECGLPRALVERMPITIGKFDEEACAALTQGTDSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDVSEA 445
            +  ++ + C  C     I  +E       F C C     V   + +QL L +  GG    +  Q  G    LVER+P    ++ E +   L      ED   SCR+CLSDY+ GD++R+LPC H+FH   ID+WL R+  CPLC   V  A
Sbjct:  829 DSQLQVVMCSSCGRAGFIQSSEALASRSSFFCSCGSP--VVPASALQL-LTAMPGGISMSSVSQHTGASPQLVERLPTM--QYQESSRKVLVAEHGEED-KVSCRVCLSDYEAGDTLRILPCLHKFHRVCIDEWLGRSVLCPLCNTSVEVA 973
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: W7U3U3_9STRA (Ring u-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3U3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.610e-11
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 2 
Query:  278 DSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLC 424
            DS D + SCRICL DY  GD +RVLPCFHRFHA    DWL R  TCPLC
Sbjct:  274 DSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRRKTCPLC 322
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: UPI000BA80192 (uncharacterized protein LOC111086613 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA80192)

HSP 1 Score: 77.4 bits (189), Expect = 3.690e-11
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 2 
Query:  191 GLPRALVERMPI------TIGKFDE--EACAALTQGTDSE-DCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDV 436
            GL RA + R+P       TI   D     C+++++  DS  +  K CR+CLS Y+ G+ +R+LPCFH +HAS ID WL  N +CP C ++V
Sbjct:  564 GLSRAEINRLPTRTFSQTTISGSDSISAGCSSISRLRDSSLNHEKECRVCLSSYETGEVLRILPCFHEYHASCIDKWLKSNRSCPTCRVEV 654
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: A0A7S3EBI4_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBI4_9RHOD)

HSP 1 Score: 72.0 bits (175), Expect = 4.290e-10
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 2 
Query:  197 PRALVERMPITIGKFDEEACAALTQGTDSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDV 436
            PR L    P  + K   E      +  D+ + ++SC ICLSDY VGD++R+LPC H FH   +D WL  + +CPLC  D+
Sbjct:  221 PRQLRGASPEEVSKLASEK----FEPDDTPEEDRSCVICLSDYDVGDTLRILPCQHAFHGKCVDQWLQLDKSCPLCKQDI 296
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: UPI00038EDA5F (E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI00038EDA5F)

HSP 1 Score: 72.8 bits (177), Expect = 9.550e-10
Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 2 
Query:  191 GLPRALVERMPITI-GKFDEEACAALTQGTDSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDVSEA 445
            GL + ++  +P+ I GK + E               KSC +CLS+YK G  +R LPCFH +H   ID WL  N+TCP+C  +V+ A
Sbjct:  520 GLTQEVIGNLPVRIFGKTEAE---------------KSCSVCLSEYKEGSEIRTLPCFHEYHVHCIDPWLLNNSTCPVCRTEVTGA 590
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BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: G1SUD5_RABIT (RING-type domain-containing protein n=2 Tax=Oryctolagus cuniculus TaxID=9986 RepID=G1SUD5_RABIT)

HSP 1 Score: 72.4 bits (176), Expect = 1.350e-9
Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 2 
Query:  170 DTDGQECGLPRALVERMPITIGKFDEEACAALTQGTDSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDVSEA 445
            D   Q  GL +  +  + +T    D              D +KSC IC++ +  G+++RVLPCFH +HA  ID WL  NTTCP+C  +V ++
Sbjct:  561 DNRDQSTGLTKQQINNLTVTSSCKD--------------DTSKSCIICITKFTKGNTIRVLPCFHEYHAHCIDRWLSENTTCPICRQEVRDS 638
[Close]
BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: UPI00199EE1DE (E3 ubiquitin-protein ligase RLIM n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00199EE1DE)

HSP 1 Score: 71.6 bits (174), Expect = 1.680e-9
Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 2 
Query:  194 LPRALVERMPITIGKFDEEACAALTQGTDSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDVS 439
            L +  +ER+P     +D    A  T+          C+IC SDYK G+ +R+LPCFH +H   ID WL  N TCP+C  DVS
Sbjct:  400 LTKVEIERLPAKA--YDPAHSAGKTE----------CQICFSDYKKGEKLRMLPCFHDYHVKCIDRWLKENATCPICRADVS 469
[Close]
BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Match: UPI00048F881D (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RLIM n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=UPI00048F881D)

HSP 1 Score: 72.4 bits (176), Expect = 1.740e-9
Identity = 33/92 (35.87%), Postives = 49/92 (53.26%), Query Frame = 2 
Query:  170 DTDGQECGLPRALVERMPITIGKFDEEACAALTQGTDSEDCNKSCRICLSDYKVGDSVRVLPCFHRFHASEIDDWLDRNTTCPLCYLDVSEA 445
            D   Q  GL +  +  + +T    D              D +KSC IC++ +  G+++RVLPCFH +HA  ID WL  NTTCP+C  +V ++
Sbjct:  933 DNRDQSTGLTKQQINNLTVTSSCKD--------------DTSKSCIICITKFTKGNTIRVLPCFHEYHAHCIDRWLSENTTCPICRQEVRDS 1010
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5593.13109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJG1_ECTSI1.210e-5454.75RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9D6F5_9STRA2.640e-1267.35RING-type domain-containing protein n=1 Tax=Nannoc... [more]
A0A6H5KTI9_9PHAE5.240e-1234.44RING-type domain-containing protein n=1 Tax=Ectoca... [more]
W7U3U3_9STRA2.610e-1167.35Ring u-box domain-containing protein n=1 Tax=Nanno... [more]
UPI000BA801923.690e-1141.76uncharacterized protein LOC111086613 n=1 Tax=Limul... [more]
A0A7S3EBI4_9RHOD4.290e-1041.25Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
UPI00038EDA5F9.550e-1039.53E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Chin... [more]
G1SUD5_RABIT1.350e-935.87RING-type domain-containing protein n=2 Tax=Orycto... [more]
UPI00199EE1DE1.680e-941.46E3 ubiquitin-protein ligase RLIM n=1 Tax=Silurus m... [more]
UPI00048F881D1.740e-935.87LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5593contigH-paniculata_contig5593:6991..11603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.0
Seed ortholog evalue1.3e-27
Seed eggNOG ortholog2880.D7FJG1
KEGG koko:K11982
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-14_006210.1
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121,ko04131
Exons6
Model size1809
Cds size312
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5593.13109.1prot_H-paniculata_contig5593.13109.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5593 8509..10323 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930592.7240207-UTR-H-paniculata_contig5593:6990..70501622930592.7240207-UTR-H-paniculata_contig5593:6990..7050Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 6991..7050 +
1691481363.0897012-UTR-H-paniculata_contig5593:6990..70501691481363.0897012-UTR-H-paniculata_contig5593:6990..7050Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 6991..7050 +
1622930592.7568386-UTR-H-paniculata_contig5593:7390..74471622930592.7568386-UTR-H-paniculata_contig5593:7390..7447Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 7391..7447 +
1691481363.1051402-UTR-H-paniculata_contig5593:7390..74471691481363.1051402-UTR-H-paniculata_contig5593:7390..7447Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 7391..7447 +
1622930592.7722301-UTR-H-paniculata_contig5593:8408..85081622930592.7722301-UTR-H-paniculata_contig5593:8408..8508Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 8409..8508 +
1691481363.1173747-UTR-H-paniculata_contig5593:8408..85081691481363.1173747-UTR-H-paniculata_contig5593:8408..8508Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 8409..8508 +
1622930592.8620582-UTR-H-paniculata_contig5593:10323..116031622930592.8620582-UTR-H-paniculata_contig5593:10323..11603Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 10324..11603 +
1691481363.1592555-UTR-H-paniculata_contig5593:10323..116031691481363.1592555-UTR-H-paniculata_contig5593:10323..11603Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5593 10324..11603 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930592.7862382-CDS-H-paniculata_contig5593:8508..85301622930592.7862382-CDS-H-paniculata_contig5593:8508..8530Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 8509..8530 +
1691481363.1280837-CDS-H-paniculata_contig5593:8508..85301691481363.1280837-CDS-H-paniculata_contig5593:8508..8530Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 8509..8530 +
1622930592.8050246-CDS-H-paniculata_contig5593:9124..92131622930592.8050246-CDS-H-paniculata_contig5593:9124..9213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 9125..9213 +
1691481363.1362205-CDS-H-paniculata_contig5593:9124..92131691481363.1362205-CDS-H-paniculata_contig5593:9124..9213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 9125..9213 +
1622930592.8206944-CDS-H-paniculata_contig5593:9662..97871622930592.8206944-CDS-H-paniculata_contig5593:9662..9787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 9663..9787 +
1691481363.1440215-CDS-H-paniculata_contig5593:9662..97871691481363.1440215-CDS-H-paniculata_contig5593:9662..9787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 9663..9787 +
1622930592.8435326-CDS-H-paniculata_contig5593:10247..103231622930592.8435326-CDS-H-paniculata_contig5593:10247..10323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 10248..10323 +
1691481363.1516125-CDS-H-paniculata_contig5593:10247..103231691481363.1516125-CDS-H-paniculata_contig5593:10247..10323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5593 10248..10323 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5593.13109.1

>prot_H-paniculata_contig5593.13109.1 ID=prot_H-paniculata_contig5593.13109.1|Name=mRNA_H-paniculata_contig5593.13109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MPITIGKFDEEACAALTQGTDSEDCNKSCRICLSDYKVGDSVRVLPCFHR
FHASEIDDWLDRNTTCPLCYLDVSEALTGSSGVAFLTAVEGNPMPFLDRG
MSR*
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mRNA from alignment at H-paniculata_contig5593:6991..11603+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5593.13109.1 ID=mRNA_H-paniculata_contig5593.13109.1|Name=mRNA_H-paniculata_contig5593.13109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4613bp|location=Sequence derived from alignment at H-paniculata_contig5593:6991..11603+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAACGGAGAGAACGAGTCTGAGGATACTGTGAAGCACTTAAGTTGCCCCA
GGTGCAGAAGGTGAGTCCTATACAACTGTACCTGGGGTGTGCACACTATG
GTTAGGGGGAACAGCGGGTAAATAGATATATGTTCGTAAAGAGGTATAAG
TTCCAGCTGCGTGGTCAGAGCTTGTGTCATGCCGCATCGAGTCCGCCAAG
AGATGACTGTGTTCGAGGTCGACAAATCGAGACGTTTGGAGGTGTTATGA
CACCGGTGCCTCTTTGCACCCTAAAGTACATGATAATTGCGGAATCAATG
CTGACGCCTGTTCTGCATAGTGGCACACACCGGCTAACGGGTAGTTCACA
CCCGTCCCCCCACATTGCCTTCTTTGCTATTCTCTCTTTTTCTGCTGCAG
TGTATTGATAATCCCAAGGGCAGAGAGGTTTCGCTGTCAGTGCCAACTGG
TCTTCAGGTGAAGCATGCACTTGATTCATGAAACGCCCCAGTAAAGGCCG
TGAGCAAATGGACGAAACACGCAACACATCTTGAATTATTTCCGGTTCAT
CTGAGTTTAGCCTATGGTCTGGGTTCCCAGAAATCAAGTGTGGTGTTGGC
TCTGCTGAGAGCTCGGTCTACGTATGATGATATGCTCGTTAAATTTGCTT
GCGTAATGAATCGTGAGACTGACAGTCCACAGGCTTGTCTCACTTGGCGT
GGGGGTGCACATTTGCTCTTAGGTGAAATGTACGTTATTCACAGTGATTC
TGCTGATCGAAGGCCTTTCCGAACTCTCGAGCATGTAGTTCATGTTGACT
ACAAGGATGTGGGGTAACTTACAACGCATCTACTTTCGTTTTTTTAATGG
TGCAAGGTCATCATGCAAAATGTTTCGTTCATGTTATGGCAGCATTTGAT
GTGAATTTATTTTGAAGTACGAATGAAATTTGGCTATCCGTCATCGATCA
TGAAACTTTTGGTAGTGTGCCAGGAGGCCAAGACTTTAAGTAACGGGGCT
TATATATGGAGCACTCTGTGTATACTGGCTTTCTGTACAACCTGCCAAAC
AACTCTTGGAATCCAAAAACCTGTCTTGAAGTACGTGGTCCAATGCTGTA
CAATTAATTCTAAGTCAACTATTCCCAGCTACTGCTGTCACATTCCACCA
ACTTTTGGCATATGTGTGAAGTGTTCGTCGTGTTCATGAAAGCCTGCACC
GTCAACTGACAGCACCTCGTTGCGTGCGAGCGCATACATCTTGTTCCATG
TGCGAACGAAAAAAACAATGCCGTTGGTATGACCTGCCTGCATGCCTATA
ATGTCTCGGTTGGTGACCTCGTTTGCGTCCAAATTACTGTAGTTGATTCC
TGTGATTCCGCCGCTCTTTTCTTGCTCTATTTTCTTGCCCTGTTCGCGGT
TGGTATGGGTCCATCCAGAGTGACCGGCACGAACAAGATACAGCTGTGCT
TAAACTCCAGGAACGGTGGGGACACGGATGGGCAAGAGTGTGGGCTCCCT
CGGGCTCTGGTCGAACGAATGCCTATCACCATCGGCAAGTGTATGTTTTA
TCTCCTCATCGCACATGCAACCACTATCCTGAGAATGCTCTGTGTGTGAC
TGTTGATGGCGATTTACGCGTCCGAAAATGATGTTAAAAATTCAACATGG
CCAAGTTCCTCCAACAGTGGATTATTTTTTCAAATTCTACATTGAAACGG
CGTAAACGACCACTATTTGTCAATGCACATCAAATATTTGCAACGATTTC
ATGGCGGGTTTTCTAAATGAACTTTCTTTTACAGGTAATTTTCCGTGAAA
GTACGAAACCTTTTGTTGGAAACATCGTCAGCAAGACCAATCGCCTACTT
GAAACTACATGTTTCAAGCTGACTCTGATAGTGCACTGCTTGTGTAGTAC
CACCGTCGTTCCGATCGAATTTTCTCCCAAAAATGATGAGCTCAAGTTGC
AGCGAGGACTACCGGTGAACATTGATCGAACGAACTGTACGACCACTCGA
CTCTGAGAATATTCCAGTTCAGAGCATGTCAGCCGTTACCTGTCAGCCAT
TACCCATCAAGTGCGACGTAAGCCCAAGGGCGCGTGTTGTGTAACCTAAT
TTATCATGCCTGCTCCCACCGTTCTTCGATACAGTCGATGAGGAAGCTTG
CGCTGCCTTGACCCAGGGAACAGATTCGGAGGACTGCAACAAGAGTTGCC
GGATTTGTCTCTCCGATTATAAGGTGAGCAAGGCGAGGTGCGCCAAGAGA
GGGAGGGCACCACTCTGATCGTTGCTTTTGTTGTGCAAGACTGCTGTGTA
AGCCATTTATTTTCTATGTTTGTCGTACCCCTTTGTTTGGGGCCAATGGC
TGAATCAAGCTTATACAATCGAATGAAGGTGTTCGCACAGATACTAATAT
ACAGGTCGGTGAAAGCTGCATGTTTCGGATAAGTTCTCACTACACTGAAA
GAGAGCTACAAGAGAGCGACGGGGTTCAAGGAGATTTATTTGCACAACGC
TGATCAATTAGGTATCAAACATGACTGGAAAATGTCGAAGCTCACCCCTG
TCACTTTTTTTTTCGGAAGTCGTTCGTCTGTTTGCAGGCAAATCTCAAGT
CTGCTTCAACTAGTTTTATTTTGATTTATATCACTCTTGTATCCCTAACA
ACGTCGGTGGCCTGTTGCTCAGGTGGGAGACTCGGTGAGGGTACTCCCAT
GCTTTCACAGGTTTCACGCAAGCGAAATTGACGACTGGTTGGACAGGAAT
ACCACTTGCCCTCTGTGCTATCTGGACGTCAGCGAGGCTCTCACGGGGTG
AGTTATTCACAGAAGTAGACATGATTCGCCACGGTTGCTGTTCTACAAAA
GTGGAGATTTTGCACCTGGCGTGTTGTTCGCGTTTTACCCTCTGAGAGAG
GAAAATTGCATTTGCAGCCGCTCTTGCGCATCTTTCCCAACGGTGTTTTG
ATGCGTTCCACACCGCTTCCATGTAGAAACGTTATCTTCACCTGCGTCCA
AAGATGCTTTGGCACGCTACAACGGATAGACGAGTCTCAGCATATGACAA
ACAACCAGGAGGCTGGCAAGCACATAAATAATTAGGTGCAAATTGTTACG
ATGGAGCATTTGTTTTTCGCCTTTCTTTCCCGTAGGAATTTGAAGGCTAG
TTTTTCGCTCTTGGATTTCATCTTCGTTTGTGTTCCGTATCTACGCGGTC
TTGATTTTTTTTCCGCCGTAAACCCTCAGCTGTTTTTTTTTTTTTGTAAA
ATTGCAGGTCATCTGGTGTGGCGTTTCTTACAGCGGTCGAGGGAAACCCG
ATGCCGTTCCTCGACAGGGGCATGAGCCGCTGACGACGAGACGATGCACG
ATTTTTTTCCTGCGCGATTTATTTGGAGGCAGCATTCCGTGGTTTATCAA
CGTATCCATGCGTTCATCTGTCGCAGTAAACGCAATGATATATTGTACTT
GCCGAGTGCTAGGAGTAGGTATCGTTTCTTCATTGATTTGTTCCTTTTCA
CTACAGAGGCGATCTGTTTCCCTTCATGTATGCTGGCGATAAATTAGCAG
TATATAATTTTTTCGATTATAACCGCCGCAGTTGGCGATAACTTGATTTT
AGCGCGGCTTTAAGTATGCATTTATGTTACAACTCACTCGATTTCTCTTG
TGTGTGTGTGTTTTTCCAGATCGGGTGCTGCCTCCTGGTGACTTCTGACT
CCATCTTTTGTTACCGCGATTGCGGTTCGTGCAGGCATAGTTTTTACTGT
TGACCGCTTATTGTACGGATTTAGTGTACTTCGTAGAGAATTGCAGTTTA
TACTGGCTTCTGTCCCGAAATAAATATATTTCATGCATTGCAGAAAAGGC
AAGAGCGCGACAGTATTGCTGAGGACCCATGGTGTCGTTTTAGGGGGCGT
TTTTTGTGCAGTTATGATGTTTTGCTGGCCACCATATGTCGAGATGACCC
TGCAGGGTATTGTATAGTTTTGAAGTTGCAGGTCATGCGCGTAGAAGGGA
TTATACCTGGTGTCGCAAAAAATACCAAAGTTAAATTGTTGAATGTAAGG
GTTGTACCCTGTTTTTGCAAATCTTCTCCCCAACCTAAGTTCGATGTCAT
ATTCATTATTACTTCCCGGTTTTGGTGGGAATTTTGTCGTCATAGAGTTG
ATATTGCCTTGTTTGTATGGTAGTGTACGGAGCAGGTTTTGTTTCTCCCT
CAACTGATTTTCGTTCTTGTTTGCTACCGATACTGACTGTATCCTAGGTC
AACAGTTCGGAGAGAAGAGCATAGTCAGTATTTTTCTGCAGTAACTTTCT
TTTGTATGTTTTCCCCTCGTGTTGCATTATGAATCATATCCTACCTGTCG
TTGCTCGTGATACGAATTCGTGGATATGCAAGGTAGCAGTGGTGCTGTCT
CCAGACGCATAACCAAGCGTGAAAGCGTGGAATCGTGTAGATTTTGGCTC
TAAAGTGATTTACTGATATATAGCAGTGTTTTCTTTTCAGGCTGTTGGCC
CGATTCCAAGACATGATGCATGTCATTCAGGCACTGGAAGTAGGTCTGTG
TATCACGAGTTTTTCCAAGTACATAAGTTATTCAAAATAATGTGAAACCA
GTGAACAATTCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig5593:6991..11603+

>mRNA_H-paniculata_contig5593.13109.1 ID=mRNA_H-paniculata_contig5593.13109.1|Name=mRNA_H-paniculata_contig5593.13109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig5593:6991..11603+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTATCACCATCGGCAAGTATGCCTATCACCATCGGCAAGTTCGATG
AGGAAGCTTGCGCTGCCTTGACCCAGGGAACAGATTCGGAGGACTGCAAC
AAGAGTTGCCGGATTTGTCTCTCCGATTATAAGTCGATGAGGAAGCTTGC
GCTGCCTTGACCCAGGGAACAGATTCGGAGGACTGCAACAAGAGTTGCCG
GATTTGTCTCTCCGATTATAAGGTGGGAGACTCGGTGAGGGTACTCCCAT
GCTTTCACAGGTTTCACGCAAGCGAAATTGACGACTGGTTGGACAGGAAT
ACCACTTGCCCTCTGTGCTATCTGGACGTCAGCGAGGCTCTCACGGGGTG
GGAGACTCGGTGAGGGTACTCCCATGCTTTCACAGGTTTCACGCAAGCGA
AATTGACGACTGGTTGGACAGGAATACCACTTGCCCTCTGTGCTATCTGG
ACGTCAGCGAGGCTCTCACGGGGTCATCTGGTGTGGCGTTTCTTACAGCG
GTCGAGGGAAACCCGATGCCGTTCCTCGACAGGGGCATGAGCCGCTGAGT
CATCTGGTGTGGCGTTTCTTACAGCGGTCGAGGGAAACCCGATGCCGTTC
CTCGACAGGGGCATGAGCCGCTGA
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