mRNA_H-paniculata_contig5588.13102.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5588.13102.1
Unique NamemRNA_H-paniculata_contig5588.13102.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 7.190e-169
Identity = 265/497 (53.32%), Postives = 335/497 (67.40%), Query Frame = 1
Query:  247 AAHPHCI--NKATDAEEELTFCP--AAQDGACCNDLEEAVVVERFN---GAGPL-SPECADYYKQVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDLYWSYPYTKPEVFETGLVEVFPEFLSTLEV--TLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDLSG----GTFYDGSPEEGLLDFTFSPMFEINGY---FYVSF--DIKDDVI-RNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPDG-MPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTEYSE--EIYGSCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFAD 1668
            AAHP C   +K TD ++ LT+C    A  GACC + EE +V   FN   G G + S  CA  YKQVVC  C S+S HL+E L ++ G LDGL+M + FCE LVD C+  I+FPTYDG  YC  HTGGG D +WSYPY +PE+FE GL EVFP+     +   T+++ QTPDGS++WL G  G I  V++ +   S LV+D+SG    GTFY    EEGLLD  F PMF  +GY   FYVS+  D+ DD++ RNRL++F Y+ G+P  T+ SEEVL+T+  +   +H+ GWLGFKPSV G  +   DLYW+ GD GPQ DP +H+Q   T+ G+++RI+VPS+G GY IP GNY  G + EICA GFR+ WRCSFDR+ D LYCGDVG   VE I  VECGNNYGW RFEG+RC E  E  E   +C    RS  T P++EYCH DY STGDDE  +T G DICGDR ++GNAVIGG+VYRG  F+DL + GA++F D
Sbjct:   16 AAHPLCFIDDKPTDYDQVLTYCDNSIAMSGACCTNEEEDIVEANFNAAFGVGVVPSTACAALYKQVVCGVCHSYSAHLYEYL-TDGGMLDGLTMKSEFCEELVDECAAYIEFPTYDGTSYCDHHTGGGNDFFWSYPYEEPEIFEPGLNEVFPDLGDGEQPDDTVSVRQTPDGSQWWLLGIAGEIYAVDSDNMDDSELVIDVSGSVTGGTFYVDY-EEGLLDVAFGPMFSESGYPNYFYVSYTVDLNDDLMQRNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVYGNSSP-QDLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSDGDGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDYQSTGDDE--FTAGNDICGDRVLLGNAVIGGYVYRGNYFSDL-LNGAYIFGD 506          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 441 bits (1133), Expect = 7.430e-147
Identity = 230/431 (53.36%), Postives = 290/431 (67.29%), Query Frame = 1
Query:  415 QVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDLYWSYPYTKPEVFETGLVEVFPEFLSTLEVTLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDLSG----GTFYDGSPEEGLLDFTFSPMF---EINGYFYVSF--DIKD-DVIRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPDG-MPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTEYSE--EIYGSCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFAD 1668
            QVVC  C S+S HL+E L ++ G LDGL+M N FCE LVDAC+  IDFPTYDG  YC  HTGGG D +WSYPY +PE+FE GL E+FP+        L   + P  +          +++V++ +   S+LV+D+SG    GTFY    EEGLLD  F PMF   +   YFYVS+  D+ D +V RNRL++F Y+ G+P  T+ SEEVL+TS  +   +H+ GWLGFKPSV G  A   DLYW+ GD GPQ D  +HAQ   ++ G+++RI+VPS+G+GY IP GNY  G + EICA GFR+ WRCSFDR+TD+LYCGDVG   VE I  VECGNNYGW RFEG+RC E  E  E    C   DRS  T P++EYCH DY S GDDE  +T G DICGDR ++GNAVIGG+VYRG  F+DL +YG ++F D
Sbjct:   35 QVVCGVCHSYSAHLYEYL-TDGGMLDGLTMKNEFCESLVDACAAYIDFPTYDGVSYCDHHTGGGADFFWSYPYEEPEIFEPGLNELFPD--------LGDGEQPSDTVS--------MRQVDSDNMDDSSLVIDVSGSVTDGTFYVDY-EEGLLDVAFGPMFSESDYPNYFYVSYTVDLNDGEVQRNRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPSVYGN-ASPQDLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSDGSGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDYSSVGDDE--FTAGVDICGDRVLLGNAVIGGYVYRGNFFSDL-LYGHYIFGD 443          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 1.540e-144
Identity = 237/496 (47.78%), Postives = 289/496 (58.27%), Query Frame = 1
Query:  220 LLVCGVGWAAAHPHCI--NKATDAEEELTFCPAAQDGACCNDLEEAVVVERFNGAGPLSPECADYYKQVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDLYWSYPYTKPEVFETGLVEVFPEFLSTLEVTLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLD----LSGGTFYDGSPEEGLLDFTFSPMFEINGY---FYVSFDIKDDV---IRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPD-GMPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTEYSEEIYGSCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFAD 1668
            LL   +   A+HP C   ++ TD +E L FCP AQ GACC D EEA+V  R    G L+ +C D YKQVVC  CGS+SGHL+ERLG+ELG LDG++M + FCE L                                                                TPD S +WL G+ G IK V+    S+ T V+D    LS G  Y    EEGLL   FSP+F  +GY   FY+S+ ++ D     RNRLSKFQY +G+P  T  SEEVL+TS  +   +H+ GW+GF+PS  GT A +HD+YW+ GD   Q DP +H Q    L GS++RISVP++GTGYEIP GN     +PEICA GFR+ WRCSFDR+TDELYCGDVG   VE I  VECGNNYGW RFEG+RC E  E   G C D DRS  T PI+EYCH DY S   DEA +  G DICG R + G AVIGG+VYRG  FAD+ +YGA+VF D
Sbjct:   14 LLGALITLCASHPLCYVDDRPTDPDEILEFCPEAQSGACCTDAEEALVQLRHEAVGNLTGDCDDLYKQVVCGVCGSYSGHLYERLGAELGVLDGMTMKSDFCEEL----------------------------------------------------------------TPDSSMYWLVGQAGEIKMVDLDDLSTMTTVVDISSGLSSGELYVDY-EEGLLGLAFSPLFSTDGYPAYFYLSYTVELDDGENQRNRLSKFQYFAGDPAFTLASEEVLLTSAPKIGSIHSAGWVGFQPSAYGTIASYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVPADGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIYEYCHPDYSSDDADEADFVAGVDICGTRMVSGTAVIGGYVYRGTYFADV-LYGAYVFGD 443          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 1.970e-132
Identity = 217/436 (49.77%), Postives = 267/436 (61.24%), Query Frame = 1
Query:  418 VVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQ--DYCTKHTGGGQDLYWSYPYTKPEVFETGLVEVFPEFLSTLEVTLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDL-----SGGTFYDGSPEEGLLDFTFSPMFEINGY---FYVSFDIKDD---VIRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPDGMPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTE--YSEEIYGSCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFADYEAR 1680
            VVCA C S+S HL+E LG+ELG LDGL+MT+ FCE LV AC GQI+FPTYD    DYCTKHTGGG D +WSYPY +  +  TG + ++                   S++W          V + S  SS LV+D+     SGG FYD   EEGLLD  F PMF +  Y   FYVS+ +  D   + RNRL++F YV G+P ATR +EEVL+T+  +   +H+ GWLGFKPS  G+                  DP +H+Q   T+ G+++RISVPS+GTGY IPPGNYP    E+CA G R+ WRC FDR  D LYCGDVG   VE I  +ECGNNYGW RFEG+RC E     E    C   DRS  T P+FEYCH DY ST  DE  +TGG D CGDR +VGN VIGG+VYRG  F+DL + GA++F D   R
Sbjct:    4 VVCARCHSYSAHLYEYLGAELGMLDGLTMTSDFCEELVTACDGQIEFPTYDSGSVDYCTKHTGGGDDFFWSYPYKERSL--TGFLFLW-------------------SRWW----------VNSDSMDSSELVIDVAGPVPSGGNFYDDF-EEGLLDVVFGPMFSVPSYPSYFYVSYTVLLDDGEMQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYGS-----------------TDPGNHSQDETTMLGAMMRISVPSDGTGYTIPPGNYPGAKAEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADEQEFTGGADTCGDRFVVGNCVIGGYVYRGNFFSDL-LDGAYIFGDSTMR 389          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI)

HSP 1 Score: 393 bits (1009), Expect = 5.840e-129
Identity = 209/403 (51.86%), Postives = 256/403 (63.52%), Query Frame = 1
Query:  415 QVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQ--DYCTKHTGGGQDLYWSYPYTKPEVFETGLVEVFPEFLSTLEV--TLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDL-----SGGTFYDGSPEEGLLDFTFSPMFEINGY---FYVSFDIKDDV---IRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPDGMPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTE--YSEEIYGSCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGD 1572
            +VVC  C SFS HL+E L +ELG LDG++M ++FC+ LV AC GQIDFPTYD    DYCTKHTGGG DL+WSYPY +    +    ++FP+  +  +   T++M QTPDGS++WL G  G I  V + S   S LV+ +     SGG+FY    EEGLLD  F PMF  N Y   FYVS+ +  D     RNRL++F YV G+  ATR SEEVL+T+  R   +H  GWLGFKPS  G    + DLYW+ GD GPQ DPF+H+Q   T+ G+++RISVP++GTGY IPPGNY     EICA G R+ WRCSFDR  D+LYCGDVG    E I  VECGNNYGW RFEG+RC E     E    C   DRS  T P+FEYCH D+ ST           DIC D
Sbjct:    5 RVVCGRCHSFSAHLYEYLAAELGLLDGMTMKSAFCDELVTACDGQIDFPTYDSGTVDYCTKHTGGGDDLFWSYPYEEAVTCDL-YSKLFPDLGANEQPDDTVSMRQTPDGSQWWLLGISGQIYAVNSDSMDESELVIHVAGPVPSGGSFYVDF-EEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDAAATRASEEVLLTTVPRFISVHAAGWLGFKPSAYGNPG-YQDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPPGNYHGSKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISAEEINLVECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTFPLFEYCHPDFDST-----------DICAD 393          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 1.210e-119
Identity = 225/522 (43.10%), Postives = 300/522 (57.47%), Query Frame = 1
Query:  193 ASATMRTSFLLVCGVGWAAAHPHCI---NKATDAEEELTFCP-AAQDGACCNDLEEAVVVERFNGA-GPLSPECADYYKQVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDL-----YWSYPYTKPEVF-ETGLVEVFPEFLST--LEVTLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDLSGGTFYDGSPEEGLLDFTFSPMFEINGYFYVSFDI----KDDVIRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHAD----FHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSE--GTGYEIPPGNYPDGM----PEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTEYSEEIYGS-CADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFADYE 1674
            AS    ++ L++       AHP C+   ++A     E TFCP    +G CC   EEAV+ E++    G LS ECA  YK+V+C  C  +S HL+ RL +E+G  DGL+MT  FC+G V AC   +         YC +H     D      YWSYP      F E  +   FP+          +AM  TPDGS +W+ G  G+IK   +  P+ +  VLD+S     D S E+GLL F FSP F   G FYVS+ +      +   NRLSKF Y +G+  AT  SEE+L+TS E+   +H+ GW+GF PS   ++AD    +HD+YW++GD GPQ DP + AQ +  L GSI+RISVPS   GTGYEIP GN  DG     PEICA G R+  RC+FD  TDELYCGDVG D+VE +  +ECG +YGW  FEG+RC +  E   G  C+  DR+    P+FEYCH DY S+ ++        D CGDR++ G +VIGG VYRGA + D+ + G ++FAD+ 
Sbjct:   10 ASVAASSAALILSLPSPGEAHPLCLYGPDRAVSTTAEATFCPDVLAEGFCCEPNEEAVLSEKYAAIEGALSAECAPLYKEVLCGVCSPYSAHLYTRL-AEMGD-DGLAMTRDFCDGFVMACGTDLALDA----TYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEDLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRA--DFSYEQGLLGFAFSPSFTETGLFYVSYSVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPS---SYADPEGAYHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDYDSSQEE-------FDACGDRTVTGLSVIGGHVYRGAKYDDI-LGGHYIFADHS 512          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 374 bits (959), Expect = 1.820e-115
Identity = 216/503 (42.94%), Postives = 269/503 (53.48%), Query Frame = 1
Query:  232 GVGWAAAHPHCI--NKATDAEEELTFCPA--AQDGACCNDLEEAVVVERFNGAGP----LSPECADYYKQVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQ--DYCTKHTGGGQDLYWSYPYTKPEVFETGLVEVFPEFLSTLEV--TLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDLSGGTFYDGSPEEGLLDFTFSPMFEINGY---FYVSFDIKDDV---IRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPDGMPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTE--YSEEIYGSCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFADYEAR 1680
            G+    +HP C   ++ TD  E LTFC    A  GACC D EE  V++ F+G  P    L+ +C++ YK+VVC  C SFS HL+E L  ELG LDG++M + FC  L+ AC GQI+FPTYD    DYCTKHTGGG D +WSYPY +       L EVFP+     +   T++M QTPDGS++WL G  G I                             GLLD  F PMF  + Y   FYVS+ +  D     RNRL++F YV G+P ATR +EEVL+T+  +   +H+ GWLGFKPSV G+                                                          EICA G R+ WRCSFDR  D+LYCGDVG   VE I  +ECGNNYGW RFEG+RC E     E    C   DRS  T P+FEYCH D+ ST  DE  +TGG D CG+R +VGN VIGG+VYRG  F+DL + GA++F D   R
Sbjct:   13 GIKVVTSHPLCFFDDRPTDYNEVLTFCDTSIAAYGACCTDDEEVQVMKDFSGVTPEGVELTGDCSNLYKEVVCGRCHSFSAHLYENLAPELGLLDGMTMKSDFCNELLTACGGQINFPTYDNNTVDYCTKHTGGGDDFFWSYPYEEAISDPRFLNEVFPDLGDNQQPDDTVSMRQTPDGSQWWLLGISGQIYA---------------------------GLLDLAFGPMFGDDSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSVHSAGWLGFKPSVYGSA---------------------------------------------------------EICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADEQEFTGGADTCGNRFVVGNCVIGGYVYRGNFFSDL-LDGAYIFGDSTMR 430          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 1.190e-100
Identity = 201/466 (43.13%), Postives = 261/466 (56.01%), Query Frame = 1
Query:  187 APASATMRTSFLL---VCGVGWAA----AHPHCINKATDA-EEELTFCPAA-QDGACCNDLEEAVVVERFNGAGPLSPECADYYKQVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDLYWSYPYTKPEVFET-GLVEVFPEFL--STLEVTLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDLSGGTFYDGSPEEGLLDFTFSPMFEINGYFYVSFDIKDDVIRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHAD--FHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSE-GTGYEIPPGNY---PDGMPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTEYSEEIYG-SCADADRSFMTPPIFEYCHFDYYSTG 1527
            AP +   R S  L   V  VG AA    AHP+C    + +   +  FCP   +DG CCN  EE+ +   +  AG     CAD Y +V+C  C  +SGHLFERL + +      ++T  FC      C+ Q+  P     DYC  H G   D YWSYP    + F T GLV+ FP+    S  +  + M  TPDGSK+W+ G +G I EV+ A P+S+  VLD+S    +  + EEGLL   FSP F   G FY S+        NRLS+F+Y   +   T  SEEVLI S E++  +H+ GW+GFKPS  G  A    H+L+W++GD+GPQ D FD  Q  + L GSIIRI V SE  +GY IP GN      G  EICA G R+ +RCSFDR  D+LYCGDVG   VESI K+ECGNNYGW +FEG RC +  E+ +  +C   DRS  T P F   +  + +TG
Sbjct:    2 APGAMVNRRSAALAAAVAAVGLAARLASAHPNCRGDFSPSFTVDAQFCPNDHEDGFCCNAQEESGIQAVYEAAGATGT-CADLYLEVMCGTCHPWSGHLFERLDTAM------TLTQEFCSQFYGECATQLGLPA----DYCEVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSSIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADPTSAKTVLDMSSLILW--TFEEGLLSMAFSPAFHTTGVFYASYVNGPSFGTNRLSRFKYDPNSAENTLGSEEVLIISSEKQSNVHSAGWIGFKPSSYGNDAAGAVHELFWAMGDSGPQLDTFDRGQDPNILHGSIIRIGVSSEMESGYSIPSGNPFSGGGGRGEICAQGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNRLYHLFPTTG 454          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 4.280e-98
Identity = 185/426 (43.43%), Postives = 244/426 (57.28%), Query Frame = 1
Query:  421 VCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDLYWSYPYTKPEVFET-GLVEVFPEFLSTL--EVTLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDLSGGTFYDGSPEEGLLDFTFSPMFEINGYFYVSFDIKDDVIRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHA----DFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSE-GTGYEIPPGNYPDGMPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVRFEGTRCTEYSEEIYG-SCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGGKDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFADY 1671
            +C  C  +SGHLFERL + +      ++T  FC      C+ Q+  P     DYC  H G   D YWSYP    + F T GLV+ FP+   +L  +  + M  TPDGSK+W+ G +G I EV+ A  + +  VLD+S    +  + EEGLL   FSP F   G FY S+        NRLS+F+Y   +   T  SEE+LITS E+K  +H+ GW+GFKPS  G  A      H+L+W++GD+GPQ D  D  Q  + L GSIIRI V SE G+G +                G R+ +RCSFDR  D+LYCGDVG   VESI K+ECGNNYGW +FEG RC +  E+ +  +C   DRS  T P F YCH D+Y   D  +     + ICGDRS++G AVI G+VYRGA + DL + G  +FAD+
Sbjct:    1 MCGTCHPWSGHLFERLDTAM------TLTQEFCSEFYGECATQLGLPA----DYCVVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSLIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADATWAKTVLDMSSLVLW--TFEEGLLSMAFSPAFHTTGVFYASYVNGPSFGTNRLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYGNDAVSAGAVHELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEVSSEMGSGDK---------------EGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYPV-DHPSYIVSDQSICGDRSVIGTAVIAGYVYRGAKYDDL-LGGNLIFADF 397          
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 4.420e-95
Identity = 193/452 (42.70%), Postives = 243/452 (53.76%), Query Frame = 1
Query:  247 AAHPHCI--NKATDAEEELTFCP--AAQDGACCNDLEEAVVVERFNGAGPLSPE----CADYYKQVVCAECGSFSGHLFERLGSELGTLDGLSMTNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDLYWSYPYTKPEVFETGLVEVFPEFLSTLEV--TLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSSTLVLDLSG-----GTFYDGSPEEGLLDFTFSPMFEINGY---FYVSFDIKDD---VIRNRLSKFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHDLYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPDGMPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNY-------GWVRFEGTRCTEYSEEIYGSCADADRSFMTPPIFEYCHFDYY 1518
            A+HP C   +K TD ++ LTFC    A  GACC D EEA VV  FN   P+  E    C D YKQVVCA C S+S HL+E LG+ELG LD                                                  E+FE GL EVFP+     +   T++M QTPDGS++WL G  G I  V++ S   S LV+D+SG     G FYD   EEGLLD  F PMF  N Y   FYVS+ +  D   + RNRL+KF Y   +P ATR SEEVL+T+  +   +H+ GWLGFKPS  G    + DLYW+ GD GPQ DPF+H+Q   T+ G+++RISVP++GTGY IP GNYP    E+CA G R+ WRC FDR  D+LYCGDVG   VE I  +E  N Y       GW    GT  ++ S +I     D +   M   + +Y H  Y+
Sbjct:   17 ASHPLCFIDDKPTDYDQVLTFCDNSIASSGACCTDDEEAQVVVDFNAVTPVGEELTGDCPDLYKQVVCARCHSYSAHLYEYLGAELGMLDA-------------------------------------------------EIFEPGLNEVFPDLADDQQPGDTVSMRQTPDGSQWWLLGISGQIYAVDSDSMDESELVIDVSGPVPSGGNFYDDF-EEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGEMQRNRLAKFTYFPEDPVATRASEEVLLTTVPKYNSIHSAGWLGFKPSDYGNPG-YSDLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPSGNYPGAKAEVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIE--NIYFLREEEDGWA--VGTIISDASVQIVSFAEDVNGEIM---LLDYQHNMYH 410          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5588.13102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4P3_ECTSI7.190e-16953.32Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
A0A6H5JZF5_9PHAE7.430e-14753.36GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G6T7_ECTSI1.540e-14447.78WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KT40_9PHAE1.970e-13249.77GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G962_ECTSI5.840e-12951.86GSDH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FJP1_ECTSI1.210e-11943.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G961_ECTSI1.820e-11542.94Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7FJN8_ECTSI1.190e-10043.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS07_9PHAE4.280e-9843.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G957_ECTSI4.420e-9542.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5588contigH-paniculata_contig5588:5471..13520 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score506.1
Seed ortholog evalue1.8e-140
Seed eggNOG ortholog2880.D7G4P3
KEGG rclassRC00194
KEGG koko:K04618,ko:K08254,ko:K11244,ko:K20929
KEGG ReactionR01098
KEGG Pathwayko00052,ko04011,ko04139,map00052,map04011,map04139
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC1.1.3.9,1.2.3.15,3.2.1.59
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons10
Model size1695
Cds size1491
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930591.105897-UTR-H-paniculata_contig5588:5470..56741622930591.105897-UTR-H-paniculata_contig5588:5470..5674Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5588 5471..5674 +
1691481362.2265005-UTR-H-paniculata_contig5588:5470..56741691481362.2265005-UTR-H-paniculata_contig5588:5470..5674Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5588 5471..5674 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930591.118132-CDS-H-paniculata_contig5588:5674..58871622930591.118132-CDS-H-paniculata_contig5588:5674..5887Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 5675..5887 +
1691481362.240263-CDS-H-paniculata_contig5588:5674..58871691481362.240263-CDS-H-paniculata_contig5588:5674..5887Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 5675..5887 +
1622930591.1314237-CDS-H-paniculata_contig5588:6188..64111622930591.1314237-CDS-H-paniculata_contig5588:6188..6411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 6189..6411 +
1691481362.2511058-CDS-H-paniculata_contig5588:6188..64111691481362.2511058-CDS-H-paniculata_contig5588:6188..6411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 6189..6411 +
1622930591.1451688-CDS-H-paniculata_contig5588:8743..88771622930591.1451688-CDS-H-paniculata_contig5588:8743..8877Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 8744..8877 +
1691481362.2657712-CDS-H-paniculata_contig5588:8743..88771691481362.2657712-CDS-H-paniculata_contig5588:8743..8877Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 8744..8877 +
1622930591.1602063-CDS-H-paniculata_contig5588:9903..99841622930591.1602063-CDS-H-paniculata_contig5588:9903..9984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 9904..9984 +
1691481362.2743516-CDS-H-paniculata_contig5588:9903..99841691481362.2743516-CDS-H-paniculata_contig5588:9903..9984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 9904..9984 +
1622930591.18266-CDS-H-paniculata_contig5588:10155..102331622930591.18266-CDS-H-paniculata_contig5588:10155..10233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 10156..10233 +
1691481362.282149-CDS-H-paniculata_contig5588:10155..102331691481362.282149-CDS-H-paniculata_contig5588:10155..10233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 10156..10233 +
1622930591.2118282-CDS-H-paniculata_contig5588:10995..111511622930591.2118282-CDS-H-paniculata_contig5588:10995..11151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 10996..11151 +
1691481362.290235-CDS-H-paniculata_contig5588:10995..111511691481362.290235-CDS-H-paniculata_contig5588:10995..11151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 10996..11151 +
1622930591.2291727-CDS-H-paniculata_contig5588:11371..115341622930591.2291727-CDS-H-paniculata_contig5588:11371..11534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 11372..11534 +
1691481362.2983232-CDS-H-paniculata_contig5588:11371..115341691481362.2983232-CDS-H-paniculata_contig5588:11371..11534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 11372..11534 +
1622930591.2456973-CDS-H-paniculata_contig5588:12609..127331622930591.2456973-CDS-H-paniculata_contig5588:12609..12733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 12610..12733 +
1691481362.3071227-CDS-H-paniculata_contig5588:12609..127331691481362.3071227-CDS-H-paniculata_contig5588:12609..12733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 12610..12733 +
1622930591.2628791-CDS-H-paniculata_contig5588:13007..132311622930591.2628791-CDS-H-paniculata_contig5588:13007..13231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 13008..13231 +
1691481362.3167112-CDS-H-paniculata_contig5588:13007..132311691481362.3167112-CDS-H-paniculata_contig5588:13007..13231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 13008..13231 +
1622930591.2889888-CDS-H-paniculata_contig5588:13425..135201622930591.2889888-CDS-H-paniculata_contig5588:13425..13520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 13426..13520 +
1691481362.3266566-CDS-H-paniculata_contig5588:13425..135201691481362.3266566-CDS-H-paniculata_contig5588:13425..13520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5588 13426..13520 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5588.13102.1prot_H-paniculata_contig5588.13102.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5588 5675..13520 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5588.13102.1

>prot_H-paniculata_contig5588.13102.1 ID=prot_H-paniculata_contig5588.13102.1|Name=mRNA_H-paniculata_contig5588.13102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=497bp
MRTSFLLVCGVGWAAAHPHCINKATDAEEELTFCPAAQDGACCNDLEEAV
VVERFNGAGPLSPECADYYKQVVCAECGSFSGHLFERLGSELGTLDGLSM
TNSFCEGLVDACSGQIDFPTYDGQDYCTKHTGGGQDLYWSYPYTKPEVFE
TGLVEVFPEFLSTLEVTLAMHQTPDGSKFWLSGKEGFIKEVEAASPSSST
LVLDLSGGTFYDGSPEEGLLDFTFSPMFEINGYFYVSFDIKDDVIRNRLS
KFQYVSGNPGATRDSEEVLITSEERKEYLHNGGWLGFKPSVIGTHADFHD
LYWSLGDAGPQADPFDHAQRLDTLFGSIIRISVPSEGTGYEIPPGNYPDG
MPEICAPGFRSHWRCSFDRDTDELYCGDVGFDKVESIYKVECGNNYGWVR
FEGTRCTEYSEEIYGSCADADRSFMTPPIFEYCHFDYYSTGDDEATYTGG
KDICGDRSIVGNAVIGGFVYRGAAFADLDIYGAFVFADYEARWVSC*
back to top

mRNA from alignment at H-paniculata_contig5588:5471..13520+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5588.13102.1 ID=mRNA_H-paniculata_contig5588.13102.1|Name=mRNA_H-paniculata_contig5588.13102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8050bp|location=Sequence derived from alignment at H-paniculata_contig5588:5471..13520+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAAAATCCTGAACACCCACTACGCAACAATCAATTTTCCCCCTCTCTCA GCCAGGAAACTTTTCTTTCTACGTGTAACATCTCGCCATCTCGATTTTGT CATCATTTCTGTCATATACTCGAGGCCGAGTGCAACGGGGATAAGTTGGA CTTGAGATCTACCCTACGAATAAGTCTAGATCTTAAGCTCCGGCTTCGGC AACGATGCGAACCTCCTTTCTTCTAGTGTGTGGAGTCGGGTGGGCGGCAG CGCATCCACACTGTATTAACAAGGCGACAGACGCTGAAGAAGAGTTGACT TTCTGTCCCGCCGCGCAAGATGGTGCGTGCTGCAATGACCTAGAGGAGGC CGTAGTGGTGGAGCGCTTCAACGGTGCTGGTCCTCTCAGCCCCGAATGTG CCGACTACTACAAACAGGTTCGCGTGATTCCGGTGCTTGCACGCTCATAC CGTCTGTATTTTCTGTTTATTGGGTCGCTGAACTTCGTTGTATCCACTGT AAACATGTAGAATTATATATGTCTACAAATTTTTCAATATCTGTACACAA AAGATCACGTATGTATCCAACGACACACACCGCCATCGTGAAACTGCCTC GTGTGCCTGATACCAAGGAATCTTTCGCCTGAGTTGCTGTGGTGTTCATG TACGTTACATCGACTAGTGCAGTGGACGGGAATGATATCCGCAATCTTGA TTTCTCCCGTCATCCCAGGTGGTGTGTGCGGAATGCGGTTCTTTCAGTGG ACATCTCTTCGAGCGACTGGGAAGTGAGCTGGGGACCCTGGATGGTCTTT CGATGACGAACAGTTTTTGCGAGGGCCTCGTAGACGCCTGCTCTGGCCAG ATCGACTTCCCCACTTACGATGGCCAGGACTACTGCACCAAGCACACCGG TGGTGGGCAAGATCTGTACTGGTCCTATCCCTATACGAAACGTGAGATGA CATATACTTATAAGAAGGTGGTTTGCTCAAGTACATTGAGGCGTTCAGAC CACATTGTATCAGATTGAGCACATTGTTACTTACGCATTTCAACACATGT ATACAGGATCATTCATTGTCACCGCAAGCAGCAAGTTGACTCTCCATGCC TGGGAGGGCGCAATGTAGCCTCTCTTTACCCTGCCCTGCTAGCCCCCGGC CAACGTTACACGTCCCTCGGATGACACCCGCTGTTTTCCGCTTCGTTACT TGTATATAGTATGGTATAATCGTTCGTCGGGAGACCTGGTGGTCCAAATC CCATGTGGCGCATCTTCCAGGCGATTTCGGAATATGTCCTCCCAGTTTTT TGATTTGAAAGATCCGGATGAGTAACACGGCTGCACTCGATTCATTGGCA GACTGGCAGGAGTGGTTTTAATTCTCTTGATTTGTTTGACCGGGGCAAGA GAGGCACATCACTCGGCTTCCAAGATTTTGTAGGTGAACAATATTATGCA AGTAAATATGTATACAAATCTTCGAGGCAGTTTGAAGTGTAACGCTTCGA CTCTTAAGTGCATGTGTCTTGTGGTCCCCAACAATGCGGTCTCTGGTCCG CCTACGTTAATAAGTGTCTTGAGGCACCATACATGCATCAATAATACCCC ACCCGTCGTTTAGCGGTGCCCTGGTCCGCCCATCGTTAGTAAGTGTCTTG AGTCACCATGCATGAGCAATAATACCCCACCCGTCTTTTAGTGTCCTTCA ACTCTGGTATTTACACACCAAACAACTTGATCTAAAATGTTTGTTGAAAT TGATGATCAAGTGAGACGTCGTAAGTTACTACATAGGTAAATCTTACAGC TGCATAGGTTTCTAAACCCTAAGTTGCTTATAAGTAAGCGGTTGCCTACG TTTTTCAGCCAGTGCTTGGTACTTGCAACAGGAGCAAATATGCTCTACTG TAGTGTTATCTCGAGGCAACAACTTGCCTAGTTTTTTTAACCTCTAATTA TTACCAGGCAACTGATTGGTTTATCTAGGCTTCTTGACCAATAGTTGTCT GCAGGCAACTACAAGTAGTTCGCTACACTTGAACGTCCGGGGCAGTGTAG TCAACAATTACTAGAAATAATTGCTCGCTGATCACCGTTTCATCACCGCG TTGCCCCTCAAGGTGCAACTTCGAGCAAGGGAGTACGATATTTGCCAACC CAGCCCCCTCGACGCGCGTATTAGGGCTAGACGCGTCAGATCCCTGGTTT GGTGCTGGTACCCACGTACTTCCCTCCCTTTTTGGTGGTTTCTCGGGAAT ACACATGCTGCTGTTAGTTACACAACATCTCTACGTGTCATATTGATCGT CCAGCTGGCTGTCACCGACCAATCGAATCCATGTGCATACTGTAGCCTGT GATCTCATGTGAAGCATATTGTCTTCCAAGAGAGAAAACACCTTTACAGT AGGAGCTCAGTATTCTGCGCTAAATTCCCACAACGTATCGAGGTCCCAGG CCTCATTTGTTTCAACACATATTTCTTATGAGCGGGCAGGTACCGTATGT GGGATCTTGCGAGTGCACCATCCTCGTGTGGTCGAGTCCCAGCGAAGTTC CCTGCTGTACTGTGTAGTGAGGACCATCGCGGAGCACAATTATAATACGG AGGTGCACAAACACAGTGTCAAGTTCCCCGCCATCGTTGACATCACCCTA TAGTATGAAGTTCTCAGTAGACCGTAACCCACGTAAACGCTATTATAATT ACAGCCTATATCCCACTCTGACCCCAAGATAACATGTGTTCCTACGTGCA TTCAAATTTTTTGTTTGCGGTTCAAAGGTTTGACATCTTCATCACATGTC CTCACCTACTGTTTGAATTATGGGCGGACGTGAGGTCTGCGAATATTTGG AAGATATGGATCAATCCAGCAGCTGGCAGTGAAGGAAGATGGGTTAACTG CTAAATTTGTATTTTTGATGTTGAAGGCCTAGATTGGCGGCGGGTTCATG CGTCCAAAGCGCAATACAAGAATGGGAACATATTGACGGGCATGCGGGGC TGTCGGCGGATGTTTCTTTCATGTGTCCCCTCTCCAGTGACGACTGAACA TACCCAATAAGCATCGATTCCAGAAAATATAGTAGTAGACGAATGAAGAT AGCGGCAATTCAGCAAGTCATCATCTCTGGTACGAATCACTGCCGAAATT TAGATCCTACAACCAACAAATGTACCGTCGAGGTGCGTACCCCTGTCCCG CTTTGGTAACACAGCTTACCAAACCCTTACGCTCTTGTATCTTATATCAT ACCCTTTTGTGTTGTCCATTCAGCTGAAGTTTTCGAGACAGGATTGGTGG AAGTGTTTCCGGAGTTCTTGAGCACCCTTGAGGTCACCCTCGCAATGCAC CAGACTCCGGACGGCAGCAAGTTTTGGCTCTCAGGAAAAGAAGGCTTCAT CAAAGAGGTATGTAGGAAAATTTCGTCTTGAGGGAAAATCTTGTGGAGGA AGAGTTGTGCGCAGAACTTGGAACCCACTACAGACCGCTGGGATCGAGCC AACAATTGGCTCACCGCCTTTTCTCGATTTGTGGTCTGCGTCTTCCTGGT ACTTTTTGTATTCTACATGCATGATGTTCCACATGCGTTACGCGTACCAT GTCTAACGTGTGGTTCGCTAGTAAGCGGTGATTTATGATTAGCCCTCCTG GGTGATATAAAAAGGAAAACGGTGTATCTATTAGAAATCGGAACCAATGG GTCATGAAGCAGCAGTTTACAGCTTTTGTGATATCGTTGTTCGACACAAG TCAAATCGAGGTGCGAGACCCATCCAATTACACTTTCGAAGTCTACACGA AGAACCTGGCCTTCATACCTACATGGTCAATTTTTTGTGGGGGCCAATCT TGAGAATGACTTACAACACGAGTGCGTGTGCGTGCCACCCATCTTCCGAC ACTTTGGTGGTTTTGATTGGCTAAGATATTATCGAGGACCGTAATTCACT CCTGGAACCTGACCCGAACAGATAGGGTAACCCGTATCCCTCTCTTCAGA TATACATGATCACTACAGACCCCATAATGCAAAAAAATACGATTCTCCTT CAGATAGGCGGGCTGATGGGACTAGTGGTAAGAAATGTCAAACGTGTGAC CGCGGGTCTGAGCGGTAGTTCTATGTGTCCACTACTTGTCGATAAAATCC GATGATGTACACTACAGCATTGCAACAAGTGCTCAAATAAATAGGTAATA ATCGTCACCGCTTGCTGTAGGGTACTGTATGTATGTTTCTTGAGAGGGAA AAATATGGGCATTAGTTCCAACTCAATTTTCGCGACTATTTGCCTTATCA ATCTCGCGTGATGTTGGGATGGCAAACGTAGCAACTCCGGTCATGTTGAC GGTTCTTCAGTATTTCTCGTTATGTTTCTTTGTCCTCCCGTGCTGTTGGA CCATGCGGGAAAACACGATCGACCGACAAGCAGGTGGAAGCGGCTTCCCC ATCAAGCAGCACTCTGGTGTTGGATCTTTCGGGGGGCACTTTTTACGACG GGAGCCCGGAAGAGGTGAACGAATGCGATTGCCATACATTCATCGCATTG ATAGCGTCGATTTCGTCTCGTGTGTAGGTACATCCAAGTGCGTGTTCCTT CCGCGATGCTGCCTCGTGTCTACTGCAGCCGCCCACACCGCATTCCTTGT GATCGATTCTTTTTGCTGTCATTTTCTCTTCTCAGGGGCTCCTCGATTTC ACCTTCAGTCCGATGTTCGAGATAAATGGCTACTTCTATGTCAGCTTTGA CATCAAAGATGACGTAAGTGGTCGGGACTTTGATGAGGGTTAGCACGGTA TAAAGTCAACGTGGGAGAAAGCAACCCGATTTGTAAGAGGGGTGTTTACC CGCAAGATCAAAATAGCAGAGTACACTGCAAACGAGTGGGTGTCAACCCT TCGACAATAAAAGAACGTTGTTCCGCATTAAGTGGAACCAACAATGTACG TTTAAGGCTCGGGTTTGGCTATTGATGACCGCCAGTGCCATAACATGATC CATTTCGATAAAGTTGTGGACCCCATCTGCATACAAATATTTCCGTCCTA CTTCGTAAGGTATACCTCCCGGACAAGCGCGAATACTTGGCGTACTCACT ACGAAAATGAGCAAGTATTCGTCTTAGTTACAGAATGAGCTCACGCATTT TATACGTCCTGGACCACCCACGACTGCTAATAATACTCGTAAATTGAATG GACAGGGGGGGGTACTTTATTTTATGTGCCCATTCATTCTGAAGCTCAGG CGATTTTTTCCATTGCATTTTCATGGCTAATACGCCAAATAGTCGTATTT GTGCGAGGGGTGTAAGGTTTATTTTAAAATATACCAGAGCTACATCTGGA TGCGAACCCACTGGTGTAGGGTGCGAGCGATATTTCATCACAGGGTGGCC TACCAGTGAACTTGGCGGTTAGAAGTACCGGGACCCCGAAGTCGCTTTTT TGTCCGTTCGGGCGTGTTCCTGGATGCTCATCGGATGTATTACTGGGACA CCTCACTGCGTCCAAAACCTTGCAGGTTATACGGAACCGGCTCTCGAAGT TTCAATACGTCAGCGGCAACCCGGGCGCCACCCGTGACTCCGAAGAGGTG CTAATTACCTCCGAAGAACGGAAAGAGTATCTTCACAACGGCGGCTGGCT GGGGTTCAAGCCCTCTGTTATCGGGACACACGTGAGATAGTTTTTGGACA TGGCAATACTTATGTTCATCTGCAGCTACGATACCTTGGCAGTTGTGTTG TGCGGTGTTTTTACGTATGTGCCTTATGAAGGCATAGCAACGTAGTCGCC TGAACAGCGGAGCTCACACATCCTTACTCTTGCCCTGATTTTCTCATCGA CCCACGGTTCGCTACTCCTTGGGTATCGTTATCCCCTCAACACCAATGCA GGCCGACTTCCACGACCTCTACTGGAGCCTCGGTGATGCGGGACCTCAGG CAGACCCGTTCGACCATGCTCAAAGGCTTGACACCCTCTTCGGGTCGATC ATTCGAATCTCTGTTCCGTCGGAGGGCACGGGCTATGAAATACCGCCTGG AAACTACCCAGATGGTGGGTACGGTGCTAATCACCGTATTTCTTCTGGAT CTAGGACTTCACGTGACCCATCTTCCGTGTCCCATCGTTTGGACTACGGT TATGGTGGTTCTAGGAGGTGTTGCAAAATGCTGTATGCCCTTCGTCTTGT TCGAAACAAATGTGAAGCAATATATTATTGGCTCATGGATCGCGTAGGCG TGGGGAGGACCAATGTGAATCTTCGACCAGCCACGATGGGATATAGTTTT TGCTTACTAGTGTGGGACATCCTAATTATGCACTCAATTCTAATTGTACC CTCAATCTCACCAAATACGCTACTTTCGTACGGACAGAAAATGCGCCACT TAGGGGCCAAAGCGATTTCTATTTTGGGCGTAACATTTCTAGAAGAATTT TCATGCGCCAATACAGGTATCTACGGAGAGCGTACGATCTGACGCTTCCA GCGGTGCAACACAGCTTGAAAACCGTAACGTTTTCGAAAATTTACACTCC CGAGAGCATGCCACCGGCACTCGAAAACCTTACACCAGATATAATGACAT TTTGCACCGCCGCGCGGATGGCTGCAAGATTTGGTGGAGGCTCTCCTTAA GGCCAGGCGCAGAGATTAATCTTCGGGTTATTGGAGATTCGGTCTCCAGA GTTCACTCTGTGTGTGGTTGCAGCTGCCGTTTTTTGGCCATACTCTGGAA CACAGTGTAAATTTTGAGGTTATCCGTTAATTAAACCTTTTTTTAGTCGT TACATTTTTTGTTCTTTCTCTATTGACTACGCCAAGCTAAGGATGTATCA TTTTTTTTCTTACAGTTGTCGAGATATTGGCCGAAAGCCCTATTTTCCTA TGGTAAAAATTCAGTTTTTTGGCTGTAACTTCCTGGTTTTTCAATATTTC GACAACAACTTGAGAACTCTTTTTTCTTTGTGCTGCTAAATAATCAACGT AAAAGACTCATTCTTCTTGAGATATGACTAGAGAGTGATCAGTATGCCCC ACAGTAGTAGAATGTCTTTGAGGTTGTGGGTGAGAATCCCTTGCCCTCGA CCATACCTCAAAACACGGTTTTCTTGCATCAATGATCAGGTATGCCCGAG ATCTGTGCCCCGGGGTTCCGCAGTCACTGGAGGTGTAGCTTCGACAGAGA CACAGATGAACTGTACTGTGGAGACGTCGGCTTCGACAAAGTGGAGAGCA TCTACAAGGTCGAGTAAGTGGCTGGGATAATATGCGTGTTGTTCCGTTGT TACGCCGCAGCAGGTAGCCTATGTTCGTGAAAAGCAGTTTTTTTTCTTCT GCCAAATGGTTGAAAAACCGGTCAGACCTTTTCTGATAATTGATGGGCTA GGTTTTCCCGTTTCATACAGGAAAACAAAAATCCTGACTTTTATGGACGA CTGAAGTTAACGAACGCGACACTTGAAATCGTTCACGGTGAAAATTCTAA TATATTGATAACGTGGATGGCTTCCGCTTTGGCTCAGGTGTGGCAACAAC TACGGGTGGGTACGTTTCGAGGGAACTCGTTGCACCGAGTATTCGGAGGA AATATACGGTAGCTGCGCCGACGCCGACCGGTCATTCATGACACCACCGA TATTCGAATACTGCCATTTCGATTACTACTCCACGGGCGACGACGAGGCG ACGTACACCGGCGGTAAAGACATCTGCGGGGACAGGAGCATCGTTGGAAA TGCCGTAATCGGTGAGAGCAGCTGCCTATTTGCCGTCTTCGTCGTGTTGT GTGCATTGGTAATGAACTGGTGTATTGGAACAATTTACAGCTGGTGGTGG CTGTTGCGCGCGTTAATTTGTAAACCCAAAACGTTTCGCCTCATCGTGCC ATGGACTGCGCTCTCTTTTCTGCCTGATTCGTGCGAACACTCCCACAACA ACCAGGAGGATTCGTTTACAGGGGGGCTGCCTTTGCTGACCTTGATATCT ACGGAGCTTTTGTTTTCGCCGACTATGAGGCCAGGTGGGTGTCATGCTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5588:5471..13520+

>mRNA_H-paniculata_contig5588.13102.1 ID=mRNA_H-paniculata_contig5588.13102.1|Name=mRNA_H-paniculata_contig5588.13102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2982bp|location=Sequence derived from alignment at H-paniculata_contig5588:5471..13520+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGAACCTCCTTTCTTCTAGTGTGTGGAGTCGGGTGGGCGGCAGCGCA
TCCACACTGTATTAACAAGGCGACAGACGCTGAAGAAGAGTTGACTTTCT
GTCCCGCCGCGCAAGATGGTGCGTGCTGCAATGACCTAGAGGAGGCCGTA
GTGGTGGAGCGCTTCAACGGTGCTGGTCCTCTCAGCCCCGAATGTGCCGA
CTACTACAAACAGATGCGAACCTCCTTTCTTCTAGTGTGTGGAGTCGGGT
GGGCGGCAGCGCATCCACACTGTATTAACAAGGCGACAGACGCTGAAGAA
GAGTTGACTTTCTGTCCCGCCGCGCAAGATGGTGCGTGCTGCAATGACCT
AGAGGAGGCCGTAGTGGTGGAGCGCTTCAACGGTGCTGGTCCTCTCAGCC
CCGAATGTGCCGACTACTACAAACAGGTGGTGTGTGCGGAATGCGGTTCT
TTCAGTGGACATCTCTTCGAGCGACTGGGAAGTGAGCTGGGGACCCTGGA
TGGTCTTTCGATGACGAACAGTTTTTGCGAGGGCCTCGTAGACGCCTGCT
CTGGCCAGATCGACTTCCCCACTTACGATGGCCAGGACTACTGCACCAAG
CACACCGGTGGTGGGCAAGATCTGTACTGGTCCTATCCCTATACGAAACG
TGGTGTGTGCGGAATGCGGTTCTTTCAGTGGACATCTCTTCGAGCGACTG
GGAAGTGAGCTGGGGACCCTGGATGGTCTTTCGATGACGAACAGTTTTTG
CGAGGGCCTCGTAGACGCCTGCTCTGGCCAGATCGACTTCCCCACTTACG
ATGGCCAGGACTACTGCACCAAGCACACCGGTGGTGGGCAAGATCTGTAC
TGGTCCTATCCCTATACGAAACCTGAAGTTTTCGAGACAGGATTGGTGGA
AGTGTTTCCGGAGTTCTTGAGCACCCTTGAGGTCACCCTCGCAATGCACC
AGACTCCGGACGGCAGCAAGTTTTGGCTCTCAGGAAAAGAAGGCTTCATC
AAAGAGCTGAAGTTTTCGAGACAGGATTGGTGGAAGTGTTTCCGGAGTTC
TTGAGCACCCTTGAGGTCACCCTCGCAATGCACCAGACTCCGGACGGCAG
CAAGTTTTGGCTCTCAGGAAAAGAAGGCTTCATCAAAGAGGTGGAAGCGG
CTTCCCCATCAAGCAGCACTCTGGTGTTGGATCTTTCGGGGGGCACTTTT
TACGACGGGAGCCCGGAAGAGGTGGAAGCGGCTTCCCCATCAAGCAGCAC
TCTGGTGTTGGATCTTTCGGGGGGCACTTTTTACGACGGGAGCCCGGAAG
AGGGGCTCCTCGATTTCACCTTCAGTCCGATGTTCGAGATAAATGGCTAC
TTCTATGTCAGCTTTGACATCAAAGATGACGGGCTCCTCGATTTCACCTT
CAGTCCGATGTTCGAGATAAATGGCTACTTCTATGTCAGCTTTGACATCA
AAGATGACGTTATACGGAACCGGCTCTCGAAGTTTCAATACGTCAGCGGC
AACCCGGGCGCCACCCGTGACTCCGAAGAGGTGCTAATTACCTCCGAAGA
ACGGAAAGAGTATCTTCACAACGGCGGCTGGCTGGGGTTCAAGCCCTCTG
TTATCGGGACACACGTTATACGGAACCGGCTCTCGAAGTTTCAATACGTC
AGCGGCAACCCGGGCGCCACCCGTGACTCCGAAGAGGTGCTAATTACCTC
CGAAGAACGGAAAGAGTATCTTCACAACGGCGGCTGGCTGGGGTTCAAGC
CCTCTGTTATCGGGACACACGCCGACTTCCACGACCTCTACTGGAGCCTC
GGTGATGCGGGACCTCAGGCAGACCCGTTCGACCATGCTCAAAGGCTTGA
CACCCTCTTCGGGTCGATCATTCGAATCTCTGTTCCGTCGGAGGGCACGG
GCTATGAAATACCGCCTGGAAACTACCCAGATGGCCGACTTCCACGACCT
CTACTGGAGCCTCGGTGATGCGGGACCTCAGGCAGACCCGTTCGACCATG
CTCAAAGGCTTGACACCCTCTTCGGGTCGATCATTCGAATCTCTGTTCCG
TCGGAGGGCACGGGCTATGAAATACCGCCTGGAAACTACCCAGATGGTAT
GCCCGAGATCTGTGCCCCGGGGTTCCGCAGTCACTGGAGGTGTAGCTTCG
ACAGAGACACAGATGAACTGTACTGTGGAGACGTCGGCTTCGACAAAGTG
GAGAGCATCTACAAGGTCGAGTATGCCCGAGATCTGTGCCCCGGGGTTCC
GCAGTCACTGGAGGTGTAGCTTCGACAGAGACACAGATGAACTGTACTGT
GGAGACGTCGGCTTCGACAAAGTGGAGAGCATCTACAAGGTCGAGTGTGG
CAACAACTACGGGTGGGTACGTTTCGAGGGAACTCGTTGCACCGAGTATT
CGGAGGAAATATACGGTAGCTGCGCCGACGCCGACCGGTCATTCATGACA
CCACCGATATTCGAATACTGCCATTTCGATTACTACTCCACGGGCGACGA
CGAGGCGACGTACACCGGCGGTAAAGACATCTGCGGGGACAGGAGCATCG
TTGGAAATGCCGTAATCGGTGTGGCAACAACTACGGGTGGGTACGTTTCG
AGGGAACTCGTTGCACCGAGTATTCGGAGGAAATATACGGTAGCTGCGCC
GACGCCGACCGGTCATTCATGACACCACCGATATTCGAATACTGCCATTT
CGATTACTACTCCACGGGCGACGACGAGGCGACGTACACCGGCGGTAAAG
ACATCTGCGGGGACAGGAGCATCGTTGGAAATGCCGTAATCGGAGGATTC
GTTTACAGGGGGGCTGCCTTTGCTGACCTTGATATCTACGGAGCTTTTGT
TTTCGCCGACTATGAGGCCAGGTGGGTGTCATGCTGAGAGGATTCGTTTA
CAGGGGGGCTGCCTTTGCTGACCTTGATATCTACGGAGCTTTTGTTTTCG
CCGACTATGAGGCCAGGTGGGTGTCATGCTGA
back to top