prot_H-paniculata_contig5585.13098.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5585.13098.1
Unique Nameprot_H-paniculata_contig5585.13098.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length530
Homology
BLAST of mRNA_H-paniculata_contig5585.13098.1 vs. uniprot
Match: D8LS28_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS28_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 6.410e-75
Identity = 213/537 (39.66%), Postives = 259/537 (48.23%), Query Frame = 0
Query:    1 LPHSYRRSFEPGHLNGRRRSIERFLQVVLDHPTLRDCDAFREFLSPECRASMDYMKNAVMTGTRRIARSVPMSMPNSKTIQKHIPIPKGVPKFPAKYNPYRRSSTRRAAATTNNMNDTVDYTTSTHGDGTYASSLSEPLPESISGGDDSGVGXXXXXXXXXXXXXXSNSEGAATATASSLRLSQAIGDMSGHCTSQVPAPALSPQRKSYLWKRNSRANSAXXXXXXXXXXXXXXXXL----GSESGSSANVSAGGETVAEVEAVLAAESLCSSLSLLXXXXXXXXXXXSDAVDQFDDFLSKDGGGAVNVSSVAENAGAAGDEGGAQIKGSVNV-CRGREGEERDAEAGRGLVMPPVGYLVPGCSDRRFGHAFEVRSGSFAADQEKIQAGPAVCPLVYADLVTGPSTQFPTAAAASAAVMKGKTTGTAGAWRKDHVAVKGRCGRIIAELT--EGGRGGQGIAGGXXXVVEGXXXXXXSDDSPFLFVVNFQIPGNPPLSFVAAWALQPQWCSPQSPEPLRRFFGLFYRFLDIPLSPPPP 530
            LPHSYRRSF+   L  RRRSI+ FLQV +  P LRD DA  +FLSPE R SM YMKNAVMTGTRRIAR VPMSMPN K IQ     PKGVPKFP KYNPY+RSSTRR+    N+ ++    + +    G +  +                  X              +S G +++  +                    A  LSP+RKSYLWKR +      XXXX           L     +E+ + A    GG   A   A+L      S  +              D   Q  +  + D   A  V++VA         GG +  G   V   GR     DA  G G  +     L+ G  D   GH F VR  SF AD  ++QA PAVCPLVYA+L T  S   P    A+    +      A + R DH+A KGRC   I ELT   GG  G+G AGG   V E           PFL + NFQIPG+PPLS VAAWA+ P+   P SPE LRRFFG+FYR +DIPLS P P
Sbjct:  183 LPHSYRRSFDASRLARRRRSIQHFLQVAVKQPALRDSDALLDFLSPEGRKSMHYMKNAVMTGTRRIARHVPMSMPNPKAIQXXXXXPKGVPKFPTKYNPYKRSSTRRS---NNDFSEDAGGSMADIFSGAHLGNXXXXXXXXXXXXXXXXXXXEMDGLTWQAHDGIDDSGGVSSSGGAXXXX---XXXXXXXXXXXXXASGLSPRRKSYLWKRPTAKTGGNXXXXGVQSYTSAGAILRPRPDAETVTVAPQETGGGGAA---ALLDGRPSVSGHADGGEARRAAGTVPGDVPHQ--ESGAADAAAAATVAAVA---------GGLENGGRNRVDLSGRAARSGDAGGGSGGGVE----LLAGVKDGGDGHRFRVRGASFLADGREVQAEPAVCPLVYAELFTFASADRPHEVPAATVAEEA----CASSGRVDHIATKGRCASKITELTARSGGHAGEGHAGGNDDVDEEGGRSRLGP--PFLVIFNFQIPGDPPLSLVAAWAVHPECLGPDSPESLRRFFGVFYRLVDIPLSSPRP 689          
BLAST of mRNA_H-paniculata_contig5585.13098.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.680e-6
Identity = 47/168 (27.98%), Postives = 71/168 (42.26%), Query Frame = 0
Query:  365 HAFEVRSGSFAADQEKIQAGPAVCPLVYADLVTGPSTQFPTAAAASAAVMKGKTTGTAGAWRKDHVAVKGRCGRIIAELTEGGRGGQGIAGGXXXVVEGXXXXXXSDDSPFLFVVNFQIPGNPPLSFVAAWALQPQW----CSPQSPEPLRRFFGLFYRFLDIPLSPP 528
            H F VR   + +D+ K+ AG AVCPLV   L     ++                       R DHVA KG+C RI+  L E                         + +PFLF++N Q+PG+PP+S V  +A+   +    CS  + +  R     +Y+  D+P+  P
Sbjct:  134 HDFHVRGPFYMSDKLKVHAGTAVCPLVLYQLYRNEPSRLND--------------------RIDHVAAKGKCRRIVEALRE------------------------LNPAPFLFILNIQVPGHPPMSMVMIFAMPADYDRRDCSSDAVK-FRNMLQTYYQ--DLPVHDP 254          
BLAST of mRNA_H-paniculata_contig5585.13098.1 vs. uniprot
Match: D7FIG2_ECTSI (EDR2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG2_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.080e-5
Identity = 50/169 (29.59%), Postives = 68/169 (40.24%), Query Frame = 0
Query:  337 ERDAEAGRGLVMPPVGYLVPGCS--------DRRFGHAFEVRSGSFAADQEKIQAGPAVCPLVYADLVTGPSTQFPTAAAASAAVMKGKTTGTAGAWRKDHVAVKGRCGRIIAELTEGGRGGQGIAGGXXXVVEGXXXXXXSDDSPFLFVVNFQIPGNPPLSFVAAWAL 497
            +R+ E GR       G    GC         D    H+F VR  ++  D+ K+ AG A+C LV  D  T  S              KG T       R DH+A +G C   +  +T G                        DD+PFLF++N Q+ G PP+S VA WA+
Sbjct:  136 DREGEEGR-----QAGASASGCDGNDTCRWKDAASIHSFLVRGPTYLQDKAKLPAGRAMCRLVGFDCFTENS--------------KGTT-------RIDHIASRGTCRERVEAMTSG------------------------DDAPFLFIMNIQVRGTPPVSMVAYWAV 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5585.13098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS28_ECTSI6.410e-7539.66PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2WM21_9STRA3.680e-627.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7FIG2_ECTSI1.080e-529.59EDR2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009769Protein ENHANCED DISEASE RESISTANCE 2, C-terminalPFAMPF07059DUF1336coord: 364..501
e-value: 3.7E-8
score: 33.7
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 2..57
e-value: 1.9E-7
score: 32.8
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 6..46
IPR001683Phox homologous domainPFAMPF00787PXcoord: 7..46
e-value: 7.1E-5
score: 22.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5585contigH-paniculata_contig5585:419..5849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5585.13098.1mRNA_H-paniculata_contig5585.13098.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5585 419..5849 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5585.13098.1 ID=prot_H-paniculata_contig5585.13098.1|Name=mRNA_H-paniculata_contig5585.13098.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=530bp
LPHSYRRSFEPGHLNGRRRSIERFLQVVLDHPTLRDCDAFREFLSPECRA
SMDYMKNAVMTGTRRIARSVPMSMPNSKTIQKHIPIPKGVPKFPAKYNPY
RRSSTRRAAATTNNMNDTVDYTTSTHGDGTYASSLSEPLPESISGGDDSG
VGGGVGGGGGGAGDGLSNSEGAATATASSLRLSQAIGDMSGHCTSQVPAP
ALSPQRKSYLWKRNSRANSAAAPPGGKGGGGGGGGGLGSESGSSANVSAG
GETVAEVEAVLAAESLCSSLSLLSSSQQQQQQDSSDAVDQFDDFLSKDGG
GAVNVSSVAENAGAAGDEGGAQIKGSVNVCRGREGEERDAEAGRGLVMPP
VGYLVPGCSDRRFGHAFEVRSGSFAADQEKIQAGPAVCPLVYADLVTGPS
TQFPTAAAASAAVMKGKTTGTAGAWRKDHVAVKGRCGRIIAELTEGGRGG
QGIAGGGGGVVEGEGEGEGSDDSPFLFVVNFQIPGNPPLSFVAAWALQPQ
WCSPQSPEPLRRFFGLFYRFLDIPLSPPPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009769EDR2_C
IPR036871PX_dom_sf
IPR001683Phox