prot_H-paniculata_contig55832.13096.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig55832.13096.1
Unique Nameprot_H-paniculata_contig55832.13096.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A6A3A563_HIBSY (Putative ribonuclease H protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A563_HIBSY)

HSP 1 Score: 106 bits (265), Expect = 1.220e-23
Identity = 56/160 (35.00%), Postives = 90/160 (56.25%), Query Frame = 0
Query:    1 MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFGGES---NGHVWKDSLMPIGRKISRT 157
            MKD GS + +LG+++  DR N  I +SQ +Y++++L R+   +C+ + TP+    K+S+  S     E    + + Y   VGSLM+A   TR DIA AV   +R M +P +E++NT KRI RY+    +  + +GG +   NG+V  D    + +  S T
Sbjct:  486 MKDLGSANNILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKPISTPLSINFKLSSSMSPSSEEERMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMTNPGKENWNTVKRILRYIKGTSNVALCYGGSNLLINGYVDSDYAGDLDKSKSTT 645          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A7M5XDS1_9CNID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XDS1_9CNID)

HSP 1 Score: 97.1 bits (240), Expect = 5.960e-22
Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    1 MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVE-GK-VKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYL 124
            M D G ++ +LG+ VR DR  G I I Q +Y+R VL+R+G DECR + TP+E GK  +  APD  +KP   KS     Y+  +GSL+YAS  TR D++Y+V   ++ M  P +E +   KR+FRY+
Sbjct:   84 MVDQGEINYILGMRVRRDRQAGIIRIDQSAYLRNVLQRFGMDECRPISTPMETGKSFEKLAPD--EKPVNLKS-----YQAAIGSLIYASIGTRPDLSYSVGVLSQYMSHPSEEHWKGVKRVFRYI 202          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: D1MBJ6_AGABI (Polyprotein n=1 Tax=Agaricus bisporus var. bisporus TaxID=192523 RepID=D1MBJ6_AGABI)

HSP 1 Score: 101 bits (252), Expect = 7.060e-22
Identity = 50/137 (36.50%), Postives = 82/137 (59.85%), Query Frame = 0
Query:    3 DSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFGGESN 139
            D G +  +LGIE+R +R  G + +SQ SYI   L+RYGF++ + V  P++  + +S   S +  +E      I Y+  VGSLMYA+  TR DIA+A+   ++  ++P ++ +   KR+FRYL    +  +TFGG+ +
Sbjct: 1109 DLGEIHWLLGIEIRRNREEGKLYMSQRSYIDSCLRRYGFEDAKPVSIPMDPSIHLSTNQSPNSTTEIARMARIPYQEAVGSLMYAAIATRPDIAFAIQVLSKFSKNPGEKHWEAVKRVFRYLKGTRELWLTFGGQDD 1245          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A8H7KIG6_AGABI (Integrase catalytic domain-containing protein n=2 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7KIG6_AGABI)

HSP 1 Score: 100 bits (248), Expect = 2.430e-21
Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = 0
Query:    3 DSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFGGESN 139
            D G +  +LGIE+R DR  G + +SQ SYI   L+RYGF++ + V  P++  +  S   S    +E      I Y+  VGSLMYA+  TR DIA+A+   ++  ++P  + +   KR+FRYL    +  +TFGG+ +
Sbjct: 1107 DLGEIHWLLGIEIRRDRNEGKLYMSQRSYIDSCLRRYGFEDAKPVSIPMDPSIHYSTNQSPKSTAEIARMARIPYQEAVGSLMYAAIATRPDIAFAIQVLSKFSKNPGIDHWEAVKRVFRYLKGTKELWLTFGGQGD 1243          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A284S2Y9_ARMOS (Uncharacterized protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284S2Y9_ARMOS)

HSP 1 Score: 97.4 bits (241), Expect = 2.120e-20
Identity = 45/131 (34.35%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    5 GSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFG 135
            G L+ +LG+EV+ DR N T++ISQ +YI  +L+++G  +C+ V  P++   +IS     + PS+      + YR ++G L++ ST TR D+A+ V   +R +++P +  +N  KR+ +YL      G+T+G
Sbjct: 1141 GPLNWLLGMEVKRDRKNHTLSISQTTYIDSLLRKFGMTDCKSVSVPLDPMTQISREQCPNTPSDVADMRDVPYRELIGGLIWLSTATRPDLAFTVCVLSRFLDNPGRPHWNAAKRVLQYLKGTRTLGLTYG 1271          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A075B5F3_ROZAC (Uncharacterized protein (Fragment) n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B5F3_ROZAC)

HSP 1 Score: 97.1 bits (240), Expect = 2.810e-20
Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = 0
Query:    1 MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITF 134
            +KD G L+  LG+ +  D  N  I +SQ ++I E L+++GF++C G+ TP+E  +  SA  S    +E     SI YR  +G+L +    TR DI+ AV  A+R +E+P +E +   KRI RYL     + +T+
Sbjct:  758 IKDLGKLNWCLGVHIEQDEKNKEIRMSQEAFIDETLRKFGFEDCAGIATPMEKGIYYSADQSPKNETEKARMASIPYREAIGNLQWLQAMTRPDISSAVSIASRFVENPGEEHWKLLKRIMRYLKATKKYCLTY 891          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A699LUQ2_TANCI (Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699LUQ2_TANCI)

HSP 1 Score: 91.3 bits (225), Expect = 8.170e-20
Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 0
Query:    1 MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFGG 136
            MKD+G    +LGI ++  R N  +TI+Q  YI ++LK++ F+ C  V TP+E  +K++       P   K    +EY   +G +MYA T TR DIAY V + +R   +P    +    R+FRYL    ++G+++ G
Sbjct:   13 MKDTGDADVILGIRIK--RENKGLTITQSHYIEKILKKFNFEGCGPVTTPMEACIKLT-------PHMGKPVNQLEYSRAIGCVMYAMTSTRPDIAYIVGKLSRFTSNPSNHHWEAIIRVFRYLKKTMNYGLSYVG 139          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A6A2YMX3_HIBSY (Thioredoxin superfamily protein, putative isoform 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YMX3_HIBSY)

HSP 1 Score: 95.5 bits (236), Expect = 9.630e-20
Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 0
Query:    1 MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFGGES---NGHVWK 144
            MKD GS +++L +++  DR N  I +SQ +Y++++L R+   +C+ + TP+    K+S+  S     E    + + Y   V SLM+A   TR DIA AV   +R M +  +E++NT KRI RY+    +  + +GG +   NG V K
Sbjct:  682 MKDFGSANKILWMQIHRDRSNKKIWLSQKNYLKKILSRFSMQDCKPIYTPIPINFKLSSSMSHSSEEERMEMSRVPYASAVRSLMFAMICTRPDIAQAVRVVSRYMANSGKENWNTVKRILRYIKGTSNIALCYGGSNLLINGWVSK 828          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA)

HSP 1 Score: 95.5 bits (236), Expect = 9.870e-20
Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 0
Query:    1 MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFGGESNGHV 142
            MKD G+ SR+LGI+++ DR  G + +SQ SY+ +V+KR+   E + V TP+ G  K+SA     + SE        Y   VGS+MYA   TR DIAYA+   +R M  P    +   K + RY+    D  + F    N  V
Sbjct: 1063 MKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSA---VKEVSECIDTEKYPYSSAVGSVMYAMIGTRPDIAYAIGLISRFMSKPGIMHWEAVKWLLRYIRGTADLNLVFTKNKNFSV 1201          
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A0G4IXE9_PLABS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IXE9_PLABS)

HSP 1 Score: 95.1 bits (235), Expect = 1.140e-19
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 0
Query:    1 MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAP----DSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVHQAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITF--GGES 138
            M D G L  V+G +V  DR  G++ +SQ  Y + +L  YG  E R V TP +  +K+S      + AD+   +  G  I YR  VG LM+    TR DIAYAV++ +R ++DP    F   KR+FRYL+   ++G+ F  GGE+
Sbjct:  234 MSDMGELQSVIGFDV--DRQGGSVFLSQERYTKTILDTYGMAESRPVSTPADANLKLSTSLCPQNQADRELAALEGQRINYRAAVGHLMWL-LHTRPDIAYAVNEVSRYVQDPGPAHFVALKRVFRYLNGTRNYGLLFEGGGET 374          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3A563_HIBSY1.220e-2335.00Putative ribonuclease H protein n=1 Tax=Hibiscus s... [more]
A0A7M5XDS1_9CNID5.960e-2243.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
D1MBJ6_AGABI7.060e-2236.50Polyprotein n=1 Tax=Agaricus bisporus var. bisporu... [more]
A0A8H7KIG6_AGABI2.430e-2137.23Integrase catalytic domain-containing protein n=2 ... [more]
A0A284S2Y9_ARMOS2.120e-2034.35Uncharacterized protein n=2 Tax=Armillaria ostoyae... [more]
A0A075B5F3_ROZAC2.810e-2036.57Uncharacterized protein (Fragment) n=1 Tax=Rozella... [more]
A0A699LUQ2_TANCI8.170e-2035.29Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetu... [more]
A0A6A2YMX3_HIBSY9.630e-2034.69Thioredoxin superfamily protein, putative isoform ... [more]
A0A1J3F7G4_NOCCA9.870e-2037.32Retrovirus-related Pol polyprotein from transposon... [more]
A0A0G4IXE9_PLABS1.140e-1938.89Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..134
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55832contigH-paniculata_contig55832:430..993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55832.13096.1mRNA_H-paniculata_contig55832.13096.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig55832 89..1038 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig55832.13096.1 ID=prot_H-paniculata_contig55832.13096.1|Name=mRNA_H-paniculata_contig55832.13096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTP
VEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRSDIAYAVH
QAARCMEDPCQEDFNTCKRIFRYLSTVPDFGITFGGESNGHVWKDSLMPI
GRKISRTESPRQDTFSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like