mRNA_H-paniculata_contig55832.13096.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 155 bits (393), Expect = 5.570e-39 Identity = 75/138 (54.35%), Postives = 96/138 (69.57%), Query Frame = 3
Query: 471 LEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGL 884
L G+VDADWA D+ DR+S +GY F L GGA+S S+KQ SSTEAEY+AA A KE +LR LG IG C+ +T L DN+SA+ +++ H RTKHI VR+H +RE + G + L+YV TGDQVAD+LTKGL
Sbjct: 983 LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGL 1120
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A4Z0A7X3_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A7X3_9AGAM) HSP 1 Score: 143 bits (361), Expect = 5.070e-38 Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = 3
Query: 471 LEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGL 884
L G+VDADWA D+ DR S +GY F L GGAIS S+KQ + SSTEAEY+AA A KE +L L IG C+ +T L DN+SA+ ++ H +TKHI VR+H +RE + G + L+YV GDQVAD+LTKGL
Sbjct: 79 LTGYVDADWAGDVNDRHSISGYTFLLAGGAISWSSKKQNMTALSSTEAEYIAAAHAAKEATWLCTFLSEIGRPCKAATLLLMDNQSAMAIAWNPVFHVQTKHIDVRYHFLREKVEAGAINLQYVPMGDQVADVLTKGL 216
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 146 bits (368), Expect = 5.450e-38 Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = 3
Query: 471 LEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGL 884
L G+VDADWA D+ DR+S +GY F L GGAIS S+KQ SSTEAEY+ A A KE +LR L IG C+ +T L DN+SA+ ++ H RTKHI +R+H +RE + G + L+YV TGDQVAD+L KGL
Sbjct: 177 LTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGL 314
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 139 bits (351), Expect = 1.150e-36 Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 3
Query: 471 LEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGLSR 890
+EG+VDAD+AED+E R+STTGY F L GA++ +++Q +VT S+TEAEYVAA A KE ++LR LL + C R+T +F DN+S + L + S H RTKHI VR H IRE + G + K V T Q AD+ TK L R
Sbjct: 59 IEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADLFTKALPR 198
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF) HSP 1 Score: 142 bits (358), Expect = 2.070e-36 Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 3
Query: 468 RLEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTK 878
+L G+VD+D+A D +DRKST+G+ F GGA+S S+KQ +VT S+TEAEYVAA + V++R +L IGFG T LF DN SAI LSK H R+KHI VR+H +RE + EGI++ +Y T +Q+ADI+TK
Sbjct: 187 KLVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTK 323
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 142 bits (359), Expect = 2.870e-36 Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = 3
Query: 468 RLEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGL 884
+L GFVD+D+A D++DRKST+GY F L GGA+S S+KQ +VT S+TEAE+VAA + ++LR +LG IG+ TTLF DN S I LSK H R+KHI VR++ +R+ + E ++ LK+ T DQ++DI+TK +
Sbjct: 219 KLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAV 357
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: UPI001EE6E994 (secreted RxLR effector protein 161-like n=1 Tax=Neodiprion lecontei TaxID=441921 RepID=UPI001EE6E994) HSP 1 Score: 138 bits (348), Expect = 7.290e-36 Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = 3
Query: 465 SRLEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGLSR 890
S L + DAD+AED E R+STTGY F+L GG I+ S++Q LVT S+TEAEYV A +E ++LR+LL I + C +T +F DN+SAI L + H RTKHI +R+H IRE + E IL ++YVQT Q DI TK R
Sbjct: 94 SELVDYSDADYAEDAETRRSTTGYVFQLAGGPITWASQRQKLVTLSTTEAEYVVASVTSREAIWLRKLLLDIEYPCADATVIFVDNQSAIRLVRNPEFHKRTKHIDIRYHYIREKVVEKILKIEYVQTKQQKGDIFTKAQPR 235
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: UPI001E692AC7 (secreted RxLR effector protein 161-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E692AC7) HSP 1 Score: 137 bits (345), Expect = 1.370e-35 Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 3
Query: 468 RLEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGL 884
+LEG+ D+D+ D +DRKST+GY FK+ GAIS S+KQ +VT S+TEAEYVAA + V+LR++L +G R + T+F DN S+I LSK H R KHI VR+H R+ ++GI+ L + TG+Q ADI+TK L
Sbjct: 74 KLEGWTDSDYVGDSDDRKSTSGYIFKVGSGAISCSSKKQPIVTLSTTEAEYVAAASCACQAVWLRKILKQLGQEQRNANTIFCDNSSSIKLSKNPILHGRCKHIDVRYHFSRDLTKQGIVELVHCSTGEQTADIMTKPL 212
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM) HSP 1 Score: 134 bits (337), Expect = 3.760e-35 Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 3
Query: 471 LEGFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIG-FGCRRSTTLFEDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGL 884
L+G+ DADWA DIE R+ST+GY F +NGG IS S+KQ V SSTEAEY+A EA +E V+L+ L +G + ++EDN+ +I L+K H RTKHI +R+H +RE + +G + L+YV T D +AD++TK +
Sbjct: 25 LQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAI 163
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 137 bits (345), Expect = 4.270e-35 Identity = 76/145 (52.41%), Postives = 92/145 (63.45%), Query Frame = 3
Query: 477 GFVDADWAEDIEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSI------GFGCRRSTTLF-EDNKSAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGDQVADILTKGLSR 890
G+ DADWA D DR+ST+ Y FKL GGAIS CSRKQ + SSTEAEYVA A KE ++L LL + R L DN+SA+ L+K S H RTKHI VR H IR+ + G L ++YV TGDQVAD+LTK L+R
Sbjct: 127 GYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAR 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55832.13096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig55832.13096.1 >prot_H-paniculata_contig55832.13096.1 ID=prot_H-paniculata_contig55832.13096.1|Name=mRNA_H-paniculata_contig55832.13096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp MKDSGSLSRVLGIEVRHDRPNGTITISQGSYIREVLKRYGFDECRGVPTPback to top mRNA from alignment at H-paniculata_contig55832:89..1038- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig55832.13096.1 ID=mRNA_H-paniculata_contig55832.13096.1|Name=mRNA_H-paniculata_contig55832.13096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=950bp|location=Sequence derived from alignment at H-paniculata_contig55832:89..1038- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig55832:89..1038- >mRNA_H-paniculata_contig55832.13096.1 ID=mRNA_H-paniculata_contig55832.13096.1|Name=mRNA_H-paniculata_contig55832.13096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig55832:89..1038- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |