mRNA_H-paniculata_contig12063.1309.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA) HSP 1 Score: 269 bits (687), Expect = 6.130e-75 Identity = 175/536 (32.65%), Postives = 279/536 (52.05%), Query Frame = 1 Query: 7 LELVHTDIAGSVDK-SFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSHEHDGTCNMEDCFSTPPVTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSLLATSA--NPFNVLSDGDDGKNNGDSSPQSKTHHQQGQPHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYFPATKGER 1605 ++L HTD+ G ++ S G ++ + +DD+SR +Y L +KSE + + + K +RSDQ G+Y+ K + F+ I+ ++A+Y+PQQNGVAER RS+ EM R + A ++++YW EA+ AVY N +PT+P N TPYE WH PK++HLR+FGC A+ +R++L A LGY S++H ++ + ++ V + S + DR + Q P ++ T+ NP + + + + PRR P T + + N+IK + +P + EA+++ E+ WRAAM+EE A N TWE VRLP GRKA+ KW +K K ++G + YKARLV G+SQ G+D+ E APV R +T RT +LA++Q+ ++ +D+ A L+A ++E++++K PP F+ + VC ++KSLYGLKQS R WN +D L + + + CLY +G++ Sbjct: 36 MDLTHTDVCGPIETPSCQGYKYFMTMIDDFSRHCTIYFLKEKSEVTTKIMDYVKMAKTQFRKTPKAIRSDQGGEYSSKNLQDFYKREGIKPQYTASYSPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFLGY----SYDHKAYRLLDKTTNEIHISRDV--KFIEKAPCSERAKHDRETRHQSKK--PQEIIIDTTLKENPITIETQAEPEVQPAFEETREIVSEIDSDTEPRRSTRP---------------TKGIPPDRLMANVIKHQIE-QPHTYSEAIESTESTAWRAAMQEEINALQGNDTWEL---VRLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQPPGFT---KGNDLVCHLKKSLYGLKQSARAWNAKIDRVLKEMQFQQAEADQCLYIRTHEGKQ 540
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A085N6C0_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085N6C0_9BILA) HSP 1 Score: 276 bits (706), Expect = 6.140e-75 Identity = 189/536 (35.26%), Postives = 265/536 (49.44%), Query Frame = 1 Query: 4 PLELVHTDIAGS-VDKSFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYD---------EDSSHEHDGTCNMEDCFSTPPVTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSLLATSANPFNVLSDGDDGKNNGDSSPQSKTHHQQGQPHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLY 1581 P E++HTD+ G + S GG + + F D+ S RKVY + +K E L LK +V R G VK LRSD ++ K F EN I S YTP+ NG+AER R++ E AR+ + T N+ + W EAV A Y +N P R N TPYE+W + P + HLRVFGC AYV +Q R++LD KA V +GY + H + +++ F+ V V +GE+A TED + T A G G P P S R S+ + R + + L++A +P S EAL+ PEA KW+ AM EE A KN TW + LP RK ++ KW+FK KV G V YKARLV GF+Q D+FET APVAR ++RT ++AA++D E+ DV A L+ ++E +F+ PP + S VC++++++YGLKQ+ R WNR DFLV + L + + C+Y Sbjct: 572 PGEILHTDVCGPFIQPSIGGSLYFVCFKDESSGYRKVYFMKRKDEVLKYLKLVITEVKRETGRAVKCLRSDCGTEFVNKTVGDFLVENGILHERSPPYTPESNGMAERENRTLVEKARSTLCTRNLPKSLWAEAVYTAAYLMNRVPNRKENTATPYERWFGKRPSVGHLRVFGCDAYVHVPAQHRKKLDPKARKVVFVGYGLSNKIYRIYDSRKHRVEEVTDVK--FNESLVKKVVL---FEGEEAKWIPTEDENQTESLQKCTGTDKKEA--------------GLKRGPGRP------------------PGSKNWERPSL-PLTMELRPRQCNPSAMLVRA----DPGSVEEALRCPEAHKWKEAMNEEIDALQKNNTWALTE---LPPDRKTVQCKWVFKTKVNPKGGVDRYKARLVAKGFTQRPEIDYFETFAPVARYDSIRTVLAIAADEDLEILQFDVKTAFLHGTIDEVIFMDQPPGYDDHSGR---VCKLQRAIYGLKQAPRAWNRRFHDFLVTLKLRRAQADQCIY 1059
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A1W7R6G9_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6G9_AEDAL) HSP 1 Score: 269 bits (687), Expect = 1.340e-73 Identity = 191/568 (33.63%), Postives = 285/568 (50.18%), Query Frame = 1 Query: 1 EPLELVHTDIAGSVDKSF-GGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSHEHDGTCNMEDCFSTPPVTPAVTRSR------------AQGEQASITSTEDRTSASQILPI-------LPTHSLLATSANPFNVLSDGDDGKNNGDSSPQSKTHHQQGQPHPRRGGTPRSS--------------QGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYFPATKGE 1602 +PL+++HTD+ G + GGCR+ + +DD+SR VY L +KSE ++++ + V G K +RSDQ G+Y + ++ + I Q F+ AYTPQQNGV+ER RS+ EMAR ++ A + +YW EAV A Y N PT+P TPYE W E P L HL++FG AYV S++R + K+ + +GY S +H ++ P T +T SR + Q SI S S+I P+ +P + A P V DD + D S + + T RS Q ++ + R K + EP+S EA++ PE + W+ AMEEE ++ +N TWE V LP RK + KW++K K DG+V YKARLV GFSQ G D+ E APVA+ +T+RT S+AA + +++ +DV +A L +EE ++++ P F ++ VC +RKSLYGLKQ+GR WNR + + L +G + +PCL+ +G+ Sbjct: 182 QPLDIIHTDVCGPMQTPTPGGCRYFLTMIDDHSRYTVVYFLKKKSEVTERIQEYVQYVKNLFGRAPKVIRSDQGGEYQNEALDRYCRQEGITQQFTTAYTPQQNGVSERKNRSLVEMARCMILDAQLPNKYWAEAVNTATYVQNRLPTKPIP-STPYEIWTGEKPDLSHLKIFGSWAYVWIPSEKRSKFQAKSKKMLFVGY----SLQHKAYRFID------PETHKLTTSRDCRFLTHREVRETEPSQGSIVSYP----FSEISPMNRDKPDEIP--DVTADDDVPIPVDHTSDDDWDGDDCSEDDFHGFETANEEDDQDDTIRSDDTVIEQHLPLAIEGQDEISGTPDVRRSNRATKGIAPQRFMTVQEYCEPRSFEEAMRCPERDFWKRAMEEEIQSLHENATWEV---VPLPKDRKTVGCKWVYKRKTDGDGNVIQYKARLVAQGFSQRYGTDYDEVFAPVAKQTTVRTLLSIAARRKLQVKHVDVKSAYLYGELEETIYMRQPTGFQTGAKGD--VCLLRKSLYGLKQAGRIWNRKITEVLRSLGYLPAEADPCLFVKKQRGQ 727
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A0P6JS54_AEDAE (Putative pol polyprotein (Fragment) n=2 Tax=Aedes aegypti TaxID=7159 RepID=A0A0P6JS54_AEDAE) HSP 1 Score: 271 bits (692), Expect = 1.830e-73 Identity = 198/572 (34.62%), Postives = 294/572 (51.40%), Query Frame = 1 Query: 1 EPLELVHTDIAGSVDK-SFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSH----EHDGTC--NMEDCFSTPP-VTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSL--LATSANPFNVLSDG----DDGKNNGDSSPQSKTHHQQGQPHPRRGGTPRSSQGRRCSVREIG-ATARVA--KVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYFPATKGERQTFW*PCMLTTWSLLVVVRQ 1665 +PL+L+H D+ G + + GGCR+ + DDYSR V+ L +KS+ LK F +V G K +RSD G++ K FF + IRQ F+ +TPQQNG+AER R++ EMAR ++ A + +YW EAV A Y N PTR TPYE W E P L H++ FG AYV Q R +LD A +GY + C N D P +PA + + ST++ S P++ L LA + SD ++G++ D+S +S + + R PR +R AT V + + T +L + EP++ EAL + E E+W+ AM+EE+ A +N TW D VRLPA RK I +W+F+ K + G VA YKARLV G SQ G D+ E APVA+ +TLR ++AA Q +++ +D+ A LN + E ++++ PP + + D VC +R+SLYGLKQ+GR WNR + D L +G + + + CL+ TK + +F +L +L+V ++ Sbjct: 466 QPLDLLHVDVCGPMKNVTPGGCRYYLTVTDDYSRYTTVFFLREKSDVEEKLKHFVMEVKTTFGRPPKVIRSDNGGEFKNKSLETFFKKEGIRQQFTTPHTPQQNGIAERKNRTLNEMARCMLLDAGLPTKYWAEAVNTASYLQNRLPTRSLEV-TPYEAWWGEKPDLSHVQPFGTDAYVWIPKQNRTKLDAAAQKMTFVGYSTQQKAFRFLDRSSGCVINSRDARFLPTRSSPADEETNGSIIEYHFPSTDN--SKLNSFPVVAGDVLGELADDEEEEVLASDQRSNHEEGRDRNDTSIESHEDTTLTEANERPLNAPRGPLSTSTPIRVSSRATKGVPPFRFRETSSLATQRTM-EPRTLAEALASAEREQWKTAMDEEYAAQQENSTW---DIVRLPANRKPIGCRWVFQKKFDEHGKVARYKARLVAQGCSQKYGTDYDEVYAPVAKHTTLRALLTIAARQKMQVKHVDIKTAYLNGKLSETIYMRQPPGYESGNPDD--VCHLRRSLYGLKQAGRVWNRTITDVLKELGYEATEADNCLF---TKTDGSSF---ILLYVDDMLIVTKE 1022
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A0V0T3I0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V0T3I0_9BILA) HSP 1 Score: 266 bits (681), Expect = 9.760e-73 Identity = 192/536 (35.82%), Postives = 273/536 (50.93%), Query Frame = 1 Query: 1 EPLELVHTDIAGSVD-KSFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSHEHDGTCNMEDCFSTPPVTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSLLATSANPFNVLSDGDDGKNNGDSSPQ------SKTHHQQGQ-PHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYF 1584 E LELVH+DI G + S GG R+ + F+DD+SR VY L K+EAL K F V R RVK LR+D +Y F +F IR + TPQQNGVAER R++ E AR +I AN+ W EAV A Y N PT+ + TP E W P L HL++FGC+A V S QR++ D K+ R+ +GY E S + + T V SR G Q+S ++ ++ S + P + +++ V + D G D +P + ++ GQ P P S + R +R + + + +P S EAL P+A++W A+ EE + +N +WE P LP +KAI+SKW+FK K K+DG++ KARLV G+SQ +G D+ +T AP S+LR SLAA+ + E++ MDV A LN + EE++++LP + CR+RKS+YGLKQ+ R W LDD L GL+ PC+YF Sbjct: 480 EVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALRKVTPEEAWSGRKPNLAHLKIFGCLAMVHVASGQRKKWDPKSEERIFVGYCETSKGYRTVDRKTKKMYVTRDV--KFLESRFPGTQSS----KEESTNSLMNPDVGEEAVI--------VWTSQDTGSTEMDPNPSVPPKVDTDSNESTGQSPQP---SVKTSPEELRRPLRNRFPNRNIFNADFLLFQTQVREQSDPISYEEALNRPDAKEWLKAINEELASHHENQSWE---PAVLPPHKKAIKSKWVFKTKYKEDGTIEKRKARLVARGYSQRQGIDYEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPNLNEEIYMELPTGVYDENNK---YCRLRKSIYGLKQASRAWYGMLDDTLRSFGLNRLKNEPCIYF 992
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A0V1KQY5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1KQY5_9BILA) HSP 1 Score: 265 bits (678), Expect = 1.570e-72 Identity = 180/543 (33.15%), Postives = 269/543 (49.54%), Query Frame = 1 Query: 4 PLELVHTDIAGS-VDKSFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYD---------EDSSHEHDGTCNMEDCFSTPPVTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSLLATSANPFNVLSDGDDGKNNGDSSPQSKTHHQQGQPHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYFPATKGE 1602 P E++H D+ G + S GG R+ I F D+ S RKVY + K E L LK ++ + G V+R+R+D+ ++ + F +E I + YTPQ NG+AER R++ E ARA + T N+ R W EAV A Y LN P R TPYE+W P ++HLR+FGC AYV Q RR+ D KA + +GY + + H D +++ S + GE+ S T D+ + +++ D KT +RG P G + ++ I ++ + ++ +P + EAL+ AEKW+ +M EE A N TW D LPA RK I+ KW+FK K+ DG V+ YKARLV G+SQ D+FET APV R ++RT ++AA++D E+ DV A L+ ++E +F + PP F+ S VC+++++LYGLKQ+ R WN+ L+DFL+ + L + +PC+Y A E Sbjct: 281 PGEIIHADVCGPFIHPSVGGNRYFICFKDESSGYRKVYFMKTKDEVLRCLKTALTEIKQETGRDVQRIRTDRGTEFANRELDNFLTEKKIVHEKTPPYTPQCNGMAERENRTLAEKARAMLHTRNLPRCLWAEAVHTAAYLLNRIPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDKVTDVQFNESLQKRLVLI-----DGEEDSWMQTADKDEDDFL---------------EYDITDD--------------KTE--------KRG--PGRPPGSKNKIKVISNPLKMELRSKSTERTAMLAAADPLTEEEALEGANAEKWKESMLEEISALHMNDTWILTD---LPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEILQFDVKTAFLHGKIDELIFKEQPPCFNDRSGR---VCKLQRALYGLKQAPRAWNKRLNDFLLTLNLQRAEADPCIYVSAPGAE 773
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A0V1APU2_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis TaxID=6334 RepID=A0A0V1APU2_TRISP) HSP 1 Score: 266 bits (680), Expect = 4.720e-72 Identity = 193/538 (35.87%), Postives = 273/538 (50.74%), Query Frame = 1 Query: 1 EPLELVHTDIAGSVD-KSFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSHEHDGTCNMEDCFSTPPVTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSLLATSANPFNVLSDGDDGKNNGDSSPQS---------KTHHQQGQPHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYF 1584 E LELVH+DI G + S GG R+ + F+DD+SR VY L K+E L K F V R RVK LR+D +Y F +F IR + TPQQNGVAER R++ E AR +I AN+ W EAV A Y N PT+ + TP E W P L HL+VFGC+A V S QR++ D K+ R+ +GY E S + + T V S+ G QAS ++ ++ S + P + +++ V + D G D +P + K+ Q QP T S + R +R + + +P S EA+ P+A++W A+ EE + +N +WE P LP +KAI+SKW+FK K K+DG++ KARLV G+SQ++G DF +T AP S+LR SLAA+ + E++ MDV A LN + EE++++LP S + CR+RKS+YGLKQ+ R W LD+ L GL+ PC+YF Sbjct: 387 EVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALRKVTPEEAWSGRKPNLAHLKVFGCLAMVHVPSGQRKKWDPKSEERIFVGYCETSKGYRTVDRKTKKMYVTRDV--KFLESQFPGTQAS----KEGSTNSLMNPDVGEEAVI--------VWTSQDSGSTEMDPNPTAPLKVDTDSDKSIGQNPQP-----STKTSPEELRRPLRNRFPNRNIFNSDFLLFQAQVREHSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWE---PAVLPPHKKAIKSKWVFKTKYKEDGTIGKRKARLVAKGYSQLQGIDFEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELP---SGVGDENNKYCRLRKSIYGLKQASRAWYGMLDETLRSFGLNRLKNEPCIYF 899
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A6S7IKL3_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IKL3_PARCT) HSP 1 Score: 261 bits (666), Expect = 8.530e-72 Identity = 175/534 (32.77%), Postives = 263/534 (49.25%), Query Frame = 1 Query: 4 PLELVHTDIAGSVD-KSFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSHEHDGTCNMEDCFSTPPVTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSLLATSANPFNVLSDGDDGKNNGDSSPQSKTHHQQGQPHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYFPATKGE 1602 PL+LVH+D+ G + KS G + + +DD++ VY L K E +++ V +++G +VK R+D EG+YT F + + + + TP+QNGVAER R++ E R+ + A + ++W E + AVY N +P+ TP+E W S+ P + HLR FGC AY +R++LD KA +LLGY ++ N F + V + ++ + ++ P + L F D ++ N + PQ T RS + RR G A A K EP++ EAL +P+ KW AME+E + N W V LP RKA+ SKW+F+ K DG+V +KARLV GFSQ G+D+ ET +PVAR ++RT +LAA+ +L MDV A LN ++EE+++K P F ++ VCR+R+S+YGLK+S R WN LD L +G +T +PC+Y GE Sbjct: 216 PLDLVHSDVCGKMSAKSLSGTEYFLTLIDDHTHYVWVYVLKHKDEVFGKFLEWKALVEKSSGRKVKVFRTDNEGEYTSTEFENYLKKEGVTHQLTVPKTPKQNGVAERMNRTLVESVRSMLADAKLPHKFWAETLPTAVYLRNRSPSVAVKGKTPFEAWTSQKPNVKHLREFGCEAYAHVPKDERKKLDSKARKCILLGYGTETKGYRLYDPNRARVFHSRDV-----QFNESSQEPEVVKVQE-----------PKQNTLVELE--FEEPIDVEEPVVNEEPEPQV---------------TRRSERDRRPPA-YYGEWATAANH----------DKNEPRTVKEALSSPQKAKWVKAMEKEMESLKTNEVWNL---VELPENRKAVGSKWVFRIKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIEKGKE-HLVCRLRRSIYGLKKSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGE 701
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A6H5GEM5_9HEMI (Integrase catalytic domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GEM5_9HEMI) HSP 1 Score: 256 bits (653), Expect = 1.670e-71 Identity = 188/589 (31.92%), Postives = 293/589 (49.75%), Query Frame = 1 Query: 7 LELVHTDIAGSVDK-SFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSHEHDGTCNMEDCFSTPPVTPAVTRSR-----AQGEQASITSTEDRT-------SASQILPILPTHSLLATSANPFNVL-----------------------------SDGDDGKN--NGDSSPQSKTHHQQGQPHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYFPATKGERQTFW*PCMLTTW 1641 LELVH D+ G ++ SFGG R+ VDDYSR V+ L K+EA +F+ R ++K +RSD ++ K F + + IR S Y+ QNGV ER+ RSI E AR + A++ + YW EAV AVY N +PT+ + TP+E W P L H+R+FGC A Q+R++ D K+ + +GY ED+ G + PVT + SR + ++ I+S ++ S+ Q++ P + + N ++ +D K + S +S + +Q SQ R S R G +A+ + N + +P S EAL +P+AE+W+ AM+EE + +KN T+E V LP G+K++ ++W+ K K+ + +KARLV G +Q G D+ ET +PV + ++LR F+LAA++D ++ MDV A L+ P+EEE++V P E P + P +++K++YGLKQSGR WNR L+D L GL S +PC++ + ER+T ++ TW Sbjct: 38 LELVHIDLCGPMETPSFGGKRYMFTIVDDYSRYTHVHFLSHKNEAFDRFLEFKAQAERQTDHKIKIIRSDGGKEFVNKQFSTYLKKEGIRHQTSVRYSSSQNGVVERAQRSIVEKARCMLADASLPKSYWAEAVNTAVYLNNRSPTKAVHDKTPFEAWTGNKPDLSHIRIFGCKAMAQVPRQKRKKWDPKSEEYIFVGYGEDTK----GYRLLH------PVTKQIQFSRDVIFLEEDDKKIISSAVKKSTEKSCVQSSEQVIVKFPDQTSKQDNQNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTETEDFKGFCSAPSVEESTSEEEQN-----------PSQDVRRSDRLKGRSAKTDVIYFAENFEE-----DPTSVQEALSSPQAEQWKRAMDEEALSLIKNDTYEW---VTLPKGKKSLMARWVLKTKIA-ESQQPKFKARLVVKGCAQRPGLDYTETFSPVVKYTSLRYLFALAAKEDLDITHMDVTTAYLHGPLEEEIYVSPPAEIRPPANK-PGHWKLKKAIYGLKQSGRCWNRRLNDVLTSCGLKPSKADPCVFI--LRNERETG----IIATW 589
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Match: A0A0V1APS7_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=25 Tax=Trichinella TaxID=6333 RepID=A0A0V1APS7_TRISP) HSP 1 Score: 265 bits (677), Expect = 1.740e-71 Identity = 193/538 (35.87%), Postives = 273/538 (50.74%), Query Frame = 1 Query: 1 EPLELVHTDIAGSVD-KSFGGCRFAIIFVDDYSRVRKVYTL*QKSEALWSLKQFERDVARANGLRVKRLRSDQEGKYTGKPFRQFFSENSIRQGFSAAYTPQQNGVAERSWRSIFEMARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKLDHLRVFGCMAYVMFQSQQRRELDDKAWTRVLLGYDEDSSHEHDGTCNMEDCFSTPPVTPAVTRSRAQGEQASITSTEDRTSASQILPILPTHSLLATSANPFNVLSDGDDGKNNGDSSPQS---------KTHHQQGQPHPRRGGTPRSSQGRRCSVREIGATARVAKVKGTGNLIKAVSKGEPKSAPEALKNPEAEKWRAAMEEEWRAFVKNGTWESEDPVRLPAGRKAIRSKWIFKWKVKKDGSVAGYKARLVTLGFSQVEGEDFFETNAPVARMSTLRTCFSLAAEQDFELEGMDVDAA*LNAPVEEELFVKLPPEFSPFSRDIPFVCRMRKSLYGLKQSGRNWNRNLDDFLVGIGLDHSTTNPCLYF 1584 E LELVH+DI G + S GG R+ + F+DD+SR VY L K+E L K F V R RVK LR+D +Y F +F IR + TPQQNGVAER R++ E AR +I AN+ W EAV A Y N PT+ + TP E W P L HL+VFGC+A V S QR++ D K+ R+ +GY E S + + T V S+ G QAS ++ ++ S + P + +++ V + D G D +P + K+ Q QP T S + R +R + + +P S EA+ P+A++W A+ EE + +N +WE P LP +KAI+SKW+FK K K+DG++ KARLV G+SQ++G DF +T AP S+LR SLAA+ + E++ MDV A LN + EE++++LP S + CR+RKS+YGLKQ+ R W LD+ L GL+ PC+YF Sbjct: 480 EVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALRKVTPEEAWSGRKPNLAHLKVFGCLAMVHVPSGQRKKWDLKSEERIFVGYCETSKGYRTVDRKTKKMYVTRDV--KFLESQFPGTQAS----KEGSTNSLMSPDVGEEAVI--------VWTSQDSGSTEMDPNPTAPLKVDTDSDKSIGQNPQP-----STKTSPEELRRPLRNRFPNRNIFNSDFLLFQAQVREHSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWE---PAVLPPHKKAIKSKWVFKTKYKEDGTIEKRKARLVAKGYSQLQGIDFEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELP---SGVGDENNKYCRLRKSIYGLKQASRAWYGMLDETLRSFGLNRLKNEPCIYF 992 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12063.1309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12063.1309.1 >prot_H-paniculata_contig12063.1309.1 ID=prot_H-paniculata_contig12063.1309.1|Name=mRNA_H-paniculata_contig12063.1309.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=345bp MARARMITANIDRRYWEEAVRLAVYCLNCAPTRPHNRGTPYEKWHSETPKback to top mRNA from alignment at H-paniculata_contig12063:417..3143- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12063.1309.1 ID=mRNA_H-paniculata_contig12063.1309.1|Name=mRNA_H-paniculata_contig12063.1309.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2727bp|location=Sequence derived from alignment at H-paniculata_contig12063:417..3143- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12063:417..3143- >mRNA_H-paniculata_contig12063.1309.1 ID=mRNA_H-paniculata_contig12063.1309.1|Name=mRNA_H-paniculata_contig12063.1309.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2070bp|location=Sequence derived from alignment at H-paniculata_contig12063:417..3143- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |