prot_H-paniculata_contig55784.13087.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig55784.13087.1
Unique Name	prot_H-paniculata_contig55784.13087.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	111

Homology

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A6B7EVB8_9PHAE (Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A6B7EVB8_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.160e-72
Identity = 105/109 (96.33%), Postives = 109/109 (100.00%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGW 109
            MKNFFLGFFISCLA+ISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSV+AITYQVTNGKNAMPAFGGRLSE+DI+DVANFVLSQSEKGW
Sbjct:    1 MKNFFLGFFISCLAMISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVNAITYQVTNGKNAMPAFGGRLSEEDIQDVANFVLSQSEKGW 109

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A6G6D7E1_ECTSI (Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A6G6D7E1_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.520e-66
Identity = 98/110 (89.09%), Postives = 104/110 (94.55%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGWD 110
            MKNFFLGFFISCLALISFYN AEAVDINNGESVF ANCSACHAGGNNVIMPEKTL+K+ALG N MNSV+AITYQVTNGKNAMPAFGGRLSE DI+DVANFVLS++E GWD
Sbjct:    1 MKNFFLGFFISCLALISFYNSAEAVDINNGESVFVANCSACHAGGNNVIMPEKTLRKEALGANNMNSVNAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSKAEGGWD 110

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A5A4MJ73_9PHAE (Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MJ73_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 4.360e-66
Identity = 99/109 (90.83%), Postives = 101/109 (92.66%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGW 109
            MKNFFLGFFISCL LISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKK AL  NQM SV AITYQVTNGKNAMPAFGGRLSE DI+DVANFVLSQS+K W
Sbjct:    1 MKNFFLGFFISCLTLISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKGALEENQMGSVKAITYQVTNGKNAMPAFGGRLSESDIEDVANFVLSQSDKDW 109

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A8F0F8D4_9PHAE (Cytochrome c6 n=4 Tax=Alariaceae TaxID=2887 RepID=A0A8F0F8D4_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 7.470e-65
Identity = 95/111 (85.59%), Postives = 104/111 (93.69%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAV-DINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGWD 110
            MKNFF GFFI+CLALISF NPA+AV D+NNG ++FTANCSACHAGGNNVIMPEKTLKKDAL TNQMNS+ AITYQVTNGKNAMPAFGGRLSE DI+DVANFVLSQ++KGWD
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAVPDLNNGSNIFTANCSACHAGGNNVIMPEKTLKKDALATNQMNSISAITYQVTNGKNAMPAFGGRLSEPDIEDVANFVLSQADKGWD 111

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A0S0GBE4_COSCS (Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 RepID=A0A0S0GBE4_COSCS)

HSP 1 Score: 197 bits (502), Expect = 8.450e-64
Identity = 93/110 (84.55%), Postives = 103/110 (93.64%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGWD 110
            MKNFF GFFI+CLALISF NPA+AVDINNGE+VFTANCSACHAGGNNVIMPEKTLKK+AL  N+M+SV AITYQVTNGKNAMPAFGGRL+E DI+DVANFVLSQS+K W+
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAVDINNGENVFTANCSACHAGGNNVIMPEKTLKKEALSQNKMDSVSAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSQSDKNWE 110

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A8E8U4P1_9PHAE (Cytochrome c6 n=3 Tax=Alaria TaxID=2888 RepID=A0A8E8U4P1_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 8.450e-64
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGWD 110
            MKNFF GFFI+CLALISF NPA+A+DINNGE++FTANCSACHAGGNNVIMPEKTLKKDAL  N+MN++ AITYQVTNGKNAMPAFG RL+E DI+DVANFV++QS+KGWD
Sbjct:    1 MKNFFFGFFIACLALISFQNPAQAIDINNGENIFTANCSACHAGGNNVIMPEKTLKKDALADNKMNTIGAITYQVTNGKNAMPAFGSRLAETDIEDVANFVITQSDKGWD 110

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A8F0F6Q3_AKKLU (Cytochrome c6 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6Q3_AKKLU)

HSP 1 Score: 194 bits (494), Expect = 1.400e-62
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGWD 110
            MK FF GFFI+CL LIS +NPA+AVDINNGE++FTANCSACHAGGNNVIMPEKTLKK+AL  N MNSV AITYQVTNGKNAMPAFGGRLSEDDI+DVANFVL+QS KGW+
Sbjct:    1 MKKFFFGFFIACLTLISSHNPAQAVDINNGENIFTANCSACHAGGNNVIMPEKTLKKNALEENSMNSVGAITYQVTNGKNAMPAFGGRLSEDDIEDVANFVLAQSGKGWE 110

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A516ICP1_9PHAE (Cytochrome c6 n=2 Tax=Lessonia TaxID=105411 RepID=A0A516ICP1_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 3.310e-61
Identity = 91/110 (82.73%), Postives = 99/110 (90.00%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGWD 110
            MKNFF GFFI CLALISF NPA+AVDINNGE+VF ANCSACH GG NVIM +KTLKKDAL  N MN+VDAITYQVTNGKNAMPAFGGRL+E DI+DVANFVLS+S+KGWD
Sbjct:    1 MKNFFFGFFIVCLALISFQNPAQAVDINNGENVFVANCSACHVGGANVIMVDKTLKKDALDRNSMNTVDAITYQVTNGKNAMPAFGGRLAETDIQDVANFVLSKSDKGWD 110

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A8F0JZA5_9PHAE (Cytochrome c6 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0JZA5_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 6.680e-61
Identity = 92/110 (83.64%), Postives = 100/110 (90.91%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGWD 110
            MKNFF GFFI+ LALISF N A+AVDINNG ++FTANCSACHAGGNNVIM EKTLKKDAL  NQMNSV AITYQVTNGKNAMPAFGGRL+E DI+DVANFVLS+SE+GWD
Sbjct:    1 MKNFFFGFFIASLALISFQNSAQAVDINNGGNIFTANCSACHAGGNNVIMIEKTLKKDALSDNQMNSVKAITYQVTNGKNAMPAFGGRLAESDIEDVANFVLSKSEEGWD 110

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BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Match: A0A8F0JYP6_9PHAE (Cytochrome c6 n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0JYP6_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.350e-60
Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 0

Query:    1 MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIMPEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANFVLSQSEKGW 109
            MK FF GFFI+CL LIS +NPA+AVDINNGE++FTANCSACHAGGNNVIMPEKTLKK+AL  N MN V+AITYQVTNGKNAMPAFG RLSEDDI+DVANFVLSQ+ K W
Sbjct:    1 MKKFFFGFFIACLTLISSHNPAQAVDINNGENIFTANCSACHAGGNNVIMPEKTLKKEALSDNLMNKVEAITYQVTNGKNAMPAFGSRLSEDDIEDVANFVLSQAAKDW 109

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig55784.13087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6B7EVB8_9PHAE	1.160e-72	96.33	Cytochrome c6 n=3 Tax=Ectocarpales TaxID=2877 RepI...	[more]
A0A6G6D7E1_ECTSI	1.520e-66	89.09	Cytochrome c6 n=1 Tax=Ectocarpus siliculosus TaxID...	[more]
A0A5A4MJ73_9PHAE	4.360e-66	90.83	Cytochrome c6 n=5 Tax=Scytosiphonaceae TaxID=2891 ...	[more]
A0A8F0F8D4_9PHAE	7.470e-65	85.59	Cytochrome c6 n=4 Tax=Alariaceae TaxID=2887 RepID=...	[more]
A0A0S0GBE4_COSCS	8.450e-64	84.55	Cytochrome c6 n=20 Tax=Laminariales TaxID=2886 Rep...	[more]
A0A8E8U4P1_9PHAE	8.450e-64	81.82	Cytochrome c6 n=3 Tax=Alaria TaxID=2888 RepID=A0A8...	[more]
A0A8F0F6Q3_AKKLU	1.400e-62	83.64	Cytochrome c6 n=1 Tax=Akkesiphycus lubricus TaxID=...	[more]
A0A516ICP1_9PHAE	3.310e-61	82.73	Cytochrome c6 n=2 Tax=Lessonia TaxID=105411 RepID=...	[more]
A0A8F0JZA5_9PHAE	6.680e-61	83.64	Cytochrome c6 n=2 Tax=Ecklonia TaxID=105406 RepID=...	[more]
A0A8F0JYP6_9PHAE	1.350e-60	81.65	Cytochrome c6 n=1 Tax=Pseudochorda nagaii TaxID=74...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008168	Cytochrome c, class IC	PRINTS	PR00605	CYTCHROMECIC	coord: 36..47 score: 55.67 coord: 79..101 score: 49.74
IPR009056	Cytochrome c-like domain	PFAM	PF13442	Cytochrome_CBB3	coord: 26..101 e-value: 1.8E-16 score: 60.2
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 25..105 score: 14.051
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 25..110 e-value: 3.0E-37 score: 129.0
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 5..109
None	No IPR available	PANTHER	PTHR34688:SF2	CYTOCHROME C6, CHLOROPLASTIC	coord: 14..110
None	No IPR available	PANTHER	PTHR34688	FAMILY NOT NAMED	coord: 14..110
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..110
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..24
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.847
IPR023655	Cytochrome c6	HAMAP	MF_00594	Cytc_PetJ	coord: 25..109 score: 28.403

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig55784	contig	H-paniculata_contig55784:418..750 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig55784.13087.1	mRNA_H-paniculata_contig55784.13087.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig55784 418..750 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig55784.13087.1 ID=prot_H-paniculata_contig55784.13087.1|Name=mRNA_H-paniculata_contig55784.13087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MKNFFLGFFISCLALISFYNPAEAVDINNGESVFTANCSACHAGGNNVIM
PEKTLKKDALGTNQMNSVDAITYQVTNGKNAMPAFGGRLSEDDIKDVANF
VLSQSEKGWD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008168	Cyt_C_IC
IPR009056	Cyt_c-like_dom
IPR036909	Cyt_c-like_dom_sf
IPR023655	Cyt_C6