prot_H-paniculata_contig5576.13082.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5576.13082.1
Unique Nameprot_H-paniculata_contig5576.13082.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A6H5JPC9_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPC9_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.720e-43
Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 0
Query:    1 MSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            MS  AS+Y LF  TM+CTEL++NN+AAAL +PI LSMA+ELEA YKPF MTVLVAASCSFLTPIGTPTN +VW+PGGYKFQDYAKLGAPL++ + ++A T+IP  FPF
Sbjct:  794 MSPPASLYALFLLTMLCTELISNNSAAALNIPIALSMARELEADYKPFAMTVLVAASCSFLTPIGTPTNTLVWQPGGYKFQDYAKLGAPLTLLFWVSACTVIPWFFPF 901          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A6H5L425_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L425_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 2.690e-40
Identity = 73/108 (67.59%), Postives = 91/108 (84.26%), Query Frame = 0
Query:    1 MSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            MS SAS+Y+L+ FTM+CTEL+TNNAAAALAVPI LS+A+EL+ASYKPFV+TV++AAS SF+TPIG  TN MVW PGGY F D+ +LG PLS+ Y+I  S L+P +FPF
Sbjct:  693 MSASASLYLLYGFTMVCTELITNNAAAALAVPIALSIAKELDASYKPFVLTVMMAASSSFMTPIGYQTNTMVWAPGGYDFSDFIRLGTPLSLIYMIIGSFLMPCLFPF 800          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A7S3XUD0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUD0_HETAK)

HSP 1 Score: 134 bits (337), Expect = 1.580e-35
Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 0
Query:    4 SASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            S +I+VLFAFT++CTELVTNNAAAAL VPI  + A+ L  S+KPF M V++AAS SF+TPIG  TN MVW PGGY F DYAK+GAPLS+  +I A   IP+VFPF
Sbjct:  296 SGAIFVLFAFTVLCTELVTNNAAAALGVPIATATAEALGVSHKPFAMAVMIAASMSFITPIGYQTNTMVWGPGGYNFGDYAKIGAPLSLCNMIFACFYIPLVFPF 400          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A835Z174_9STRA (Citrate transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z174_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.980e-31
Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 0
Query:    5 ASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            ++++ L+A TM  TE+VTNNAAAA+ VP+ LS+A+ L+ S KPF M VL+AAS SF+TPIG  TN MVW PGGY F D+AK G PLSI Y + A  L+P VFPF
Sbjct:  539 SALFCLYAVTMFITEIVTNNAAAAIGVPLALSIAKALDVSPKPFYMAVLIAASASFITPIGYQTNTMVWAPGGYSFLDFAKYGLPLSIIYAVVAVLLLPTVFPF 642          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A7S1H9P0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9P0_HEMAN)

HSP 1 Score: 119 bits (298), Expect = 8.370e-31
Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 0
Query:    1 MSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            MS  A+++ L+A T + TE  TNNAAA L  PI LS+A+ L  S+KPF+M ++VAAS SF+TPIG  TN+MVW PGGYKF D++K+G PLS  +++    LIP V+ F
Sbjct:  159 MSPQATLFFLYAITQVMTEFTTNNAAAGLIFPIALSVAERLGVSWKPFLMCIMVAASASFVTPIGYQTNMMVWAPGGYKFSDFSKIGIPLSSIFMVCVCLLIPAVWTF 266          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A7S0VIJ6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VIJ6_9CRYP)

HSP 1 Score: 119 bits (297), Expect = 2.220e-29
Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 0
Query:    1 MSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            M+  A+++ LFA T + TE  TNNAAA L  PI LS+A+ L  S+KPF+M ++VAAS SF+TPIG  TN+MVW PGGYKF D++K+G PLS  +++    LIP ++ F
Sbjct:  347 MTPQATLFFLFAITQVMTEFTTNNAAAGLIFPIALSVAERLGVSWKPFLMCIMVAASASFVTPIGYQTNMMVWAPGGYKFSDFSKIGLPLSSIFMVCVCLLIPTIWKF 454          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: UPI001F36B1ED (SLC13 family permease n=1 Tax=Thiomicrorhabdus sp. Am19 TaxID=2791037 RepID=UPI001F36B1ED)

HSP 1 Score: 114 bits (286), Expect = 1.550e-27
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 0
Query:   11 FAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            +  TM+ TE+VTNNAAAAL +PI L+ A  L+AS  P++MTV  AAS SFLTP G  TN+MV+ PGGY+F DY K+G P+S+ Y I   +L+P+VFPF
Sbjct:  476 YLLTMLLTEMVTNNAAAALGIPIALATAHALDASAMPYIMTVAYAASASFLTPYGYQTNLMVYTPGGYRFLDYIKMGLPVSLVYGITVISLVPLVFPF 573          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A517SFE4_9PLAN (Sodium-dependent dicarboxylate transporter SdcS n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SFE4_9PLAN)

HSP 1 Score: 111 bits (277), Expect = 2.960e-26
Identity = 52/100 (52.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    9 VLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            +++  T++ TEL+TNN AA L +P+ LS  Q+L  SYKPFV+ V++AASC F TP G  TN+MV+ PGGYKF DY ++G PL I  +I    + P VFPF
Sbjct:  508 IVYFLTLVLTELITNNTAAVLMLPLTLSTVQQLGVSYKPFVIAVMMAASCGFATPFGYQTNLMVYGPGGYKFADYLRIGIPLDIIMMIVCIAIAPFVFPF 607          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A2E3RRB3_9BACT (SLC13 family permease n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3RRB3_9BACT)

HSP 1 Score: 110 bits (274), Expect = 7.400e-26
Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    6 SIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            S+ V++  TM+ TEL+TNNAAA L  PIG++ AQ L++S  PFV  +++AASC F TP+G  TN+MV+ PGGY+F DY + G  L++   + A  LIPV++PF
Sbjct:  492 SLVVIYLVTMLFTELITNNAAAVLMFPIGITTAQSLDSSPLPFVFAIMIAASCGFATPLGYQTNLMVYGPGGYRFSDYIRCGGMLNLLIAVIALALIPVIWPF 594          
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: UPI000EFCB3A6 (SLC13 family permease n=1 Tax=Leptolyngbya sp. BC1307 TaxID=2029589 RepID=UPI000EFCB3A6)

HSP 1 Score: 110 bits (274), Expect = 7.920e-26
Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = 0
Query:   10 LFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 108
            ++A T I TE++TNNAAAAL  PI LS+A +L  SY PFV+ +++AAS SF TPIG  TN+MV  PGGYKF D+ ++G PL+I Y +    L P ++PF
Sbjct:  535 IYAVTTILTEIITNNAAAALIFPIALSLANQLGVSYLPFVIGIMIAASASFATPIGYQTNLMVCGPGGYKFSDFLRIGVPLNILYGVVTVALTPFIYPF 633          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPC9_9PHAE1.720e-4372.22CitMHS domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5L425_9PHAE2.690e-4067.59CitMHS domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S3XUD0_HETAK1.580e-3564.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z174_9STRA1.980e-3159.62Citrate transporter-domain-containing protein n=1 ... [more]
A0A7S1H9P0_HEMAN8.370e-3153.70Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0VIJ6_9CRYP2.220e-2952.78Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
UPI001F36B1ED1.550e-2757.14SLC13 family permease n=1 Tax=Thiomicrorhabdus sp.... [more]
A0A517SFE4_9PLAN2.960e-2652.00Sodium-dependent dicarboxylate transporter SdcS n=... [more]
A0A2E3RRB3_9BACT7.400e-2650.49SLC13 family permease n=1 Tax=Phycisphaerae bacter... [more]
UPI000EFCB3A67.920e-2653.54SLC13 family permease n=1 Tax=Leptolyngbya sp. BC1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001898Solute carrier family 13PFAMPF00939Na_sulph_sympcoord: 7..99
e-value: 2.1E-9
score: 36.9
NoneNo IPR availablePANTHERPTHR43652:SF2coord: 8..107
NoneNo IPR availablePANTHERPTHR43652FAMILY NOT NAMEDcoord: 8..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..106
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
IPR031312Sodium/sulphate symporter, conserved sitePROSITEPS01271NA_SULFATEcoord: 56..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5576contigH-paniculata_contig5576:10509..13048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5576.13082.1mRNA_H-paniculata_contig5576.13082.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5576 9858..13237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5576.13082.1 ID=prot_H-paniculata_contig5576.13082.1|Name=mRNA_H-paniculata_contig5576.13082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVM
TVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAAST
LIPVVFPF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001898SLC13A/DASS
IPR031312Na/sul_symport_CS