mRNA_H-paniculata_contig5576.13082.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A6H5JPC9_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPC9_9PHAE) HSP 1 Score: 243 bits (619), Expect = 6.190e-69 Identity = 122/171 (71.35%), Postives = 143/171 (83.63%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
+ +RAVF A AVL+LG WVDA +AVGHV W LL+LIGSALG SKAIANSGLA A A+R SGMS AS+Y LF TM+CTEL++NN+AAAL +PI LSMA+ELEA YKPF MTVLVAASCSFLTPIGTPTN +VW+PGGYKFQDYAKLGAPL++ + ++A T+IP FPF
Sbjct: 731 DMIRAVFAASAVLLLGGWVDAKQAVGHVNWGLLLLIGSALGFSKAIANSGLAAMAGKAVRESGMSPPASLYALFLLTMLCTELISNNSAAALNIPIALSMARELEADYKPFAMTVLVAASCSFLTPIGTPTNTLVWQPGGYKFQDYAKLGAPLTLLFWVSACTVIPWFFPF 901
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A6H5L425_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L425_9PHAE) HSP 1 Score: 230 bits (586), Expect = 8.640e-65 Identity = 114/171 (66.67%), Postives = 141/171 (82.46%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
VRA F A VLI+G WVD ++VG+V+W LL+L+GSALGLSKAIANSGLA YA +AI+ SGMS SAS+Y+L+ FTM+CTEL+TNNAAAALAVPI LS+A+EL+ASYKPFV+TV++AAS SF+TPIG TN MVW PGGY F D+ +LG PLS+ Y+I S L+P +FPF
Sbjct: 630 TMVRAAFAAGGVLIMGGWVDPRKSVGYVDWSLLLLVGSALGLSKAIANSGLAGYAGNAIKDSGMSASASLYLLYGFTMVCTELITNNAAAALAVPIALSIAKELDASYKPFVLTVMMAASSSFMTPIGYQTNTMVWAPGGYDFSDFIRLGTPLSLIYMIIGSFLMPCLFPF 800
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A7S3XUD0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUD0_HETAK) HSP 1 Score: 191 bits (486), Expect = 1.800e-53 Identity = 100/173 (57.80%), Postives = 126/173 (72.83%), Query Frame = 1
Query: 10 RAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF*SSQN 528
RA A V + WVD+ +A +V+W LL+LIGSALG+S+AI NSGL+ ADAI S + S +I+VLFAFT++CTELVTNNAAAAL VPI + A+ L S+KPF M V++AAS SF+TPIG TN MVW PGGY F DYAK+GAPLS+ +I A IP+VFPF S+ +
Sbjct: 233 RAAMTAALVFTVAGWVDSKKAASYVDWRLLLLIGSALGVSQAITNSGLSNAVADAIASSNLPPSGAIFVLFAFTVLCTELVTNNAAAALGVPIATATAEALGVSHKPFAMAVMIAASMSFITPIGYQTNTMVWGPGGYNFGDYAKIGAPLSLCNMIFACFYIPLVFPFSSTSS 405
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A835Z174_9STRA (Citrate transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z174_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.350e-49 Identity = 95/171 (55.56%), Postives = 124/171 (72.51%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
+ V+A A VL++ + A +AVG+V+W LL+LIGSA+GLSK++ NSGLA Y DAI G+S ++++ L+A TM TE+VTNNAAAA+ VP+ LS+A+ L+ S KPF M VL+AAS SF+TPIG TN MVW PGGY F D+AK G PLSI Y + A L+P VFPF
Sbjct: 472 DMVQAAMAAIGVLLVTGCISAKKAVGYVDWALLLLIGSAIGLSKSMENSGLADYVGDAIAEGGLSPWSALFCLYAVTMFITEIVTNNAAAAIGVPLALSIAKALDVSPKPFYMAVLIAASASFITPIGYQTNTMVWAPGGYSFLDFAKYGLPLSIIYAVVAVLLLPTVFPF 642
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A7S1H9P0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9P0_HEMAN) HSP 1 Score: 171 bits (434), Expect = 3.260e-47 Identity = 83/171 (48.54%), Postives = 119/171 (69.59%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
+ ++A + A L++G WVDA +A +V W L++LIGS LG+S++I SGLA ++ +GMS A+++ L+A T + TE TNNAAA L PI LS+A+ L S+KPF+M ++VAAS SF+TPIG TN+MVW PGGYKF D++K+G PLS +++ LIP V+ F
Sbjct: 96 SMLQAAMTSAAFLVVGGWVDAKKATTYVPWDLMLLIGSMLGVSRSITESGLADTIGKGVKDAGMSPQATLFFLYAITQVMTEFTTNNAAAGLIFPIALSVAERLGVSWKPFLMCIMVAASASFVTPIGYQTNMMVWAPGGYKFSDFSKIGIPLSSIFMVCVCLLIPAVWTF 266
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A7S0VIJ6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VIJ6_9CRYP) HSP 1 Score: 176 bits (447), Expect = 3.600e-47 Identity = 86/171 (50.29%), Postives = 120/171 (70.18%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
+ +RA A A L++G WVDA +A +V W L++LIGS LG+S++I SGLA A+R +GM+ A+++ LFA T + TE TNNAAA L PI LS+A+ L S+KPF+M ++VAAS SF+TPIG TN+MVW PGGYKF D++K+G PLS +++ LIP ++ F
Sbjct: 284 SMLRAAMTAAAFLVVGGWVDAKKATTYVPWDLMLLIGSMLGVSRSITESGLADTIGKAVRDAGMTPQATLFFLFAITQVMTEFTTNNAAAGLIFPIALSVAERLGVSWKPFLMCIMVAASASFVTPIGYQTNMMVWAPGGYKFSDFSKIGLPLSSIFMVCVCLLIPTIWKF 454
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A7S4UE97_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UE97_GUITH) HSP 1 Score: 164 bits (416), Expect = 3.010e-44 Identity = 76/171 (44.44%), Postives = 119/171 (69.59%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
+ V++ A AVLI G W+DA +AVG+V W L++LIGS LG+S++I SGLA A+R +G++ S+++++ T + TE+ TNNAAA L P+ + +A +L SYKP++ T++ AAS SF+TPIG TN+MVW PGGYK+ D+ ++G PL++ +++ L+ +PF
Sbjct: 131 DMVKSAMTAAAVLIAGGWIDAKKAVGYVSWDLMLLIGSMLGISRSITTSGLADILGSALRNTGVNPMGSLFMIYGITTVMTEITTNNAAAGLIFPLVIDLAAKLGVSYKPYMFTIMAAASSSFITPIGYQTNMMVWGPGGYKYIDFMRIGIPLNMLHMVITCLLVSRFWPF 301
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: A0A6H5JJK1_9PHAE (CitMHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJK1_9PHAE) HSP 1 Score: 173 bits (438), Expect = 6.030e-44 Identity = 89/170 (52.35%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 4 QVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
QV+A F A A+LI G WVDA ++VG V+W LL+LIGSALGLSK I NSGLA Y AIR SG+S AS++VL+ FTM+ SYKPF++TV++AAS SF+TPIG TN +VW PGGYKF D+ K+G PLS+ YL+ S L+P +FPF
Sbjct: 757 QVQAAFTAGAILIFGGWVDAKKSVGFVDWSLLLLIGSALGLSKGIVNSGLADYVGGAIRSSGISADASLFVLYGFTMV---------------------------SYKPFILTVMLAASSSFITPIGYQTNTLVWGPGGYKFTDFIKIGTPLSLIYLVLGSLLVPQIFPF 899
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: L1JME9_GUITC (CitMHS domain-containing protein n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1JME9_GUITC) HSP 1 Score: 164 bits (416), Expect = 1.610e-41 Identity = 76/171 (44.44%), Postives = 119/171 (69.59%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
+ V++ A AVLI G W+DA +AVG+V W L++LIGS LG+S++I SGLA A+R +G++ S+++++ T + TE+ TNNAAA L P+ + +A +L SYKP++ T++ AAS SF+TPIG TN+MVW PGGYK+ D+ ++G PL++ +++ L+ +PF
Sbjct: 491 DMVKSAMTAAAVLIAGGWIDAKKAVGYVSWDLMLLIGSMLGISRSITTSGLADILGSALRNTGVNPMGSLFMIYGITTVMTEITTNNAAAGLIFPLVIDLAAKLGVSYKPYMFTIMAAASSSFITPIGYQTNMMVWGPGGYKYIDFMRIGIPLNMLHMVITCLLVSRFWPF 661
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Match: L1IRC1_GUITC (CitMHS domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRC1_GUITC) HSP 1 Score: 160 bits (406), Expect = 4.130e-40 Identity = 78/171 (45.61%), Postives = 116/171 (67.84%), Query Frame = 1
Query: 1 NQVRAVFVACAVLILGDWVDAARAVGHVEWPLLVLIGSALGLSKAIANSGLAQYAADAIRGSGMSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMTVLVAASCSFLTPIGTPTNIMVWKPGGYKFQDYAKLGAPLSIFYLIAASTLIPVVFPF 513
+ V++ A A+L+ G W+DA +A G+V W L++LIGS LG+S AI +SGLA A++ +GMS S+++++ T + TE+ TNNAAA L P+ + +A +L SYKPF+ TV+ AAS SF+TPIG TN+MVW PGGY + D+ K+G PL+I ++I L+ + F
Sbjct: 493 DMVQSAMTAAALLVAGGWIDAKKAAGYVAWELMLLIGSMLGMSTAITSSGLADIVGTAMKNAGMSPLGSLFLVYGITTVMTEITTNNAAAGLIFPLAIDVAYKLGISYKPFMFTVMSAASASFITPIGYQTNMMVWGPGGYTYFDFMKIGIPLNILHMITTCLLVNQFWKF 663 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5576.13082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5576.13082.1 >prot_H-paniculata_contig5576.13082.1 ID=prot_H-paniculata_contig5576.13082.1|Name=mRNA_H-paniculata_contig5576.13082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp MSCSASIYVLFAFTMICTELVTNNAAAALAVPIGLSMAQELEASYKPFVMback to top mRNA from alignment at H-paniculata_contig5576:9858..13237- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5576.13082.1 ID=mRNA_H-paniculata_contig5576.13082.1|Name=mRNA_H-paniculata_contig5576.13082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3380bp|location=Sequence derived from alignment at H-paniculata_contig5576:9858..13237- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5576:9858..13237- >mRNA_H-paniculata_contig5576.13082.1 ID=mRNA_H-paniculata_contig5576.13082.1|Name=mRNA_H-paniculata_contig5576.13082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig5576:9858..13237- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |