|
Homology
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI) HSP 1 Score: 728 bits (1878), Expect = 6.470e-256 Identity = 415/615 (67.48%), Postives = 461/615 (74.96%), Query Frame = 1
Query: 1 MADAETVRKQRQKQLEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASRSSPG-----GGGDLDAYIQQLITTPTPGQPTAGDGAAREGLPNASSTS--PALEGSSTRTATRLSLLTISTGLGTVTVPPKVAEFYDKGCQADLGGGP-SAIMGNGGTDEDGDAIGALSSA-AKKTPDRRRNHLRVFGLGGRGVPVPDGSEGEDQGHHPG----LFAGSPSPLRPLLR-PSASTPGSASGRSFEKNGGNGM---PLTPPV-AAKTLSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHGGNPVTVSSMALAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSPSKSLRGLLLSSSVDWTTRLWHLARGK-APIQSLTHGTYDYVCDAKW 1788
MADA+ VR+QRQKQLED XXXXXXXXXXX +A ++PG GG DLDAYI+ L++TP PG DG + P S+++ + GS R A RLS LTI GLG+V V PK EFYDKGCQADLGG + G G DE DA+GA SS+ AK+TPD+RRNH RVFG GG+GVPVPDGSEGED G+ P L A S SP RP +R P ASTPGS SGR + +G GM P+TPP AAK LS +EKKE+VQ DHFQDFLRRSSR +ERALGE ALD+LLDYA DEGD+ RGDQGQ LNEAM LHEDRWCQER+LTDLQWSPH PELVLA Y+ARGHGLDATSSS+LHTDADGLVL+WSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLH+GGT+NAPSLLTAST+GRVS G PVT+SSMA+AQG+EQK +VVGSESGGIYTTPLHFRNSGVVEEY GH+GLVTSVDANPS SK LRGL+LSSSVDWTTRLW L +G A +Q+LTHGTYDYVCDAKW
Sbjct: 1 MADADAVRQQRQKQLEDKRRRLDALXXXXXXXXXXXKIASDAAATAQKQADG----------EAENAAPGSPVATGGADLDAYIKSLLSTPAPGGGAEEDGRSPPPAPGVSTSTGGSSWAGSDRRAADRLSSLTIVCGLGSVDVAPKSTEFYDKGCQADLGGAAGTGAQGTAGADEGVDAVGAQSSSSAKRTPDKRRNHRRVFGRGGKGVPVPDGSEGEDLGYPPSGAPSLVAAS-SPSRPGVRQPVASTPGSRSGR-WTGDGTGGMTALPMTPPATAAKPLSVDEKKEIVQTDHFQDFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGRVSTXXXXXXXXXXXXXXXXXXGKPVTISSMAVAQGDEQKNIVVGSESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKPLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKW 603
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: A0A836C896_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C896_9STRA) HSP 1 Score: 311 bits (798), Expect = 2.640e-96 Identity = 160/336 (47.62%), Postives = 219/336 (65.18%), Query Frame = 1
Query: 826 DHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQGQ-HLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHG-------LDATSSSSLHTDADGLVLMWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLS-------HGGNPVTVSSMALAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSPSKSLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
D F FL+R VERAL E A DIL DY+ +G S G L++ + ++ WC +RA+TD+ WSPH PEL+L YSA G G L A ++ H D GLVL+WS+A+ RPE+ L SQSP+LTARFH FD H+++GG+YSGQVV WD RA SLPVQ+TP+S HT P++ + + GT A +L+TASTDGRV+ WNP QL QP + + L+ G ++VS +A GE +L+VG +SG I +H ++GV E+ GH G+VT++D NPS +K+L+ L+LSSS+DWTTRLW L + P+ + +H +YDYVCD +W
Sbjct: 55 DSFSKFLKRCGTVVERALTEQATFDILKDYS--KGATSERTHGSDQLHKLLRFYDPTWCGDRAITDVHWSPHYPELLLVAYSASGRGQNLESALLGAPAAGDAHPD--GLVLVWSLALPSRPEFILYSQSPILTARFHEFDAHLVVGGSYSGQVVTWDLRATSLPVQQTPVSDAAHTRPIFGMAMEGTGAAHALVTASTDGRVAWWNPRQLLQPNEVLQLALAQSDNDASGGGLSVSCIACVPGETV-QLLVGMDSGRILAVAVHTHSAGVQREFHGHFGMVTALDTNPSKAKALQELVLSSSMDWTTRLWSLRQSDKPLVTFSHDSYDYVCDVRW 385
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: F4PS77_CAVFA (Cytoplasmic dynein intermediate chain n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PS77_CAVFA) HSP 1 Score: 269 bits (688), Expect = 2.640e-78 Identity = 150/344 (43.60%), Postives = 207/344 (60.17%), Query Frame = 1
Query: 790 LSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYA-ADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMA-MQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHGGNPVTV----SSMALA----QGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSP-SKSLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
L +EKKE+++++ F+ F RSS+ +ERAL +DIL+DY D+ D S + L L ++RW + R++TD+ WSP PELV+ YSA G D DG+VL+WS+ +PEY + QSPV+T F F +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ V G+ NA +L++ STDG++ WN LSQP++ + L+ N + SS+A+ Q E VGSE G IY H +G+ + Y GHHG +TS+D +PS S L LSSS DWTTRLW + +AP+ S DYV DA+W
Sbjct: 198 LDEQEKKEILESESFRTFFTRSSKVIERALMLDDNIDILVDYTKTDDEDKS---SSKELKLMGTLVDERWSKHRSVTDINWSPKHPELVVTSYSANETGSH---------DPDGVVLVWSVNNFYQKPEYVFNCQSPVMTTFFSRFHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMSVVGSTNANTLISVSTDGKLCSWNLDNLSQPVETLDLNAKNNTSSTVSATSSIAVTSLVFQETEMNAFFVGSEDGSIYQAHRHGSKTGISDRYKGHHGPITSIDFHPSRGSIDFGNLFLSSSTDWTTRLWSTNKTEAPVYSF-EDYVDYVYDARW 528
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: UPI0006449257 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449257) HSP 1 Score: 256 bits (654), Expect = 2.370e-73 Identity = 141/342 (41.23%), Postives = 201/342 (58.77%), Query Frame = 1
Query: 790 LSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMAMQ-HRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHGGNP-------VTVSSMALAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSP-SKSLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
LS +K ++++D F+ F RSS+ +ERAL ++DIL+DY + D + L L ++RW + R++TD+ WSP PELV+ YS+ G D DG+VL+WS+ +PEY + QSPV+T F F +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ V G+ NA SL++ STDG++ W+ LSQP++ + L+ N + V+S+ + E VG+E G IY H +GV E + GH+G +TSVD +PS S L LSSS DWT +LW + + PI S +YV DA+W
Sbjct: 201 LSEHDKNNILESDSFRSFFSRSSKVIERALYLDDSIDILVDYT--KSDEVTKSSTKELTLVGTLADERWTKHRSVTDINWSPKHPELVVTSYSSNEAGSH---------DPDGVVLVWSVNNYFQKPEYTFNCQSPVMTTFFSRFHHTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSIGHTHPVYSMSVVGSANANSLVSISTDGKLCSWSLENLSQPIETLDLNSRNNTNISTTASIAVTSLVFPE-SEMNSFYVGTEEGVIYQAQRHGAKAGVNERFKGHYGPITSVDFHPSRGSTDFSNLFLSSSTDWTCKLWSTNKTETPIYSF-EDYVEYVYDARW 529
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: D3AZM5_POLPP (Cytoplasmic dynein intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZM5_POLPP) HSP 1 Score: 255 bits (651), Expect = 7.480e-73 Identity = 142/343 (41.40%), Postives = 201/343 (58.60%), Query Frame = 1
Query: 790 LSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMAMQ-HRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHGGNPVTVS---SMALAQ----GEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSP--SKSLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
L+ +K ++++D F+ F R+S+ +ERAL ++DIL+DY + D + L L ++RW + R++TD+ WSP PELV+ YSA G D DG+VL+W++ +PEY + QSPV+T F + +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ V G+ NA SL++ STDG++ W+ LSQP++ + L+ N TVS S+A+ E VG+E G IY H +GV E + H+G VTS+D +P S L LSSS DWT RLW ++ PI S T DYV DA+W
Sbjct: 202 LNDLDKSNILESDSFKSFFSRTSKVIERALCLDDSIDILVDYT--KSDEESKSSSKELTLIGTLQDERWSKHRSVTDINWSPKHPELVVTSYSANEAGSH---------DPDGVVLVWTVNNYFQKPEYVFNCQSPVMTTFFSRYHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDGKLCSWSLDNLSQPIETLDLNSRANTATVSTTTSIAVTSLVFPETEMNTFYVGTEEGVIYQAQAHGAKAGVNERFKAHYGPVTSIDFHPPSRNSSEFSNLFLSSSTDWTCRLWSSSKPDQPIYSFEDYT-DYVFDARW 532
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: A0A0G4H2R6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2R6_VITBC) HSP 1 Score: 246 bits (627), Expect = 3.860e-69 Identity = 141/341 (41.35%), Postives = 198/341 (58.06%), Query Frame = 1
Query: 790 LSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDY---AADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHGGNPVTVSSMALAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSPSKSLRG-----LLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
L E++++++ + F DF ++SR VERALG A DIL+DY AA+EG++ G + +E +D+W Q R +T + SP PEL +A Y R ++ TD DG VL+WS+ M RPEY + QS VLTA F F H++IGGTYSG +V+WDTRAK+ P+ RTPLS+ GH +PVY++ + GT+NA +L++ STDGR+ W+ L P + + G V+V+ MA +GE L+ G+E G I +H GV E + GH G +T VD +P + G LLLS+S DWT RLW + S + DYV DAKW
Sbjct: 221 LPDEDRQKILTSTDFADFFNKTSRLVERALG--AQFDILVDYSGVAAEEGNDMEGVEKVKRHETYR--DDKWTQGRCVTSVCNSPKFPELFMASYGQR--------ENAAPTDPDGCVLVWSLPMTQRPEYVFTCQSAVLTACFDKFQPHLVIGGTYSGSIVLWDTRAKAGPIHRTPLSSRGHAHPVYSMALVGTQNAHNLISVSTDGRLCVWSLGMLVHPQEFIDFKKGNRDVSVTCMAFEEGETNV-LMAGAEDGSIVQAHIHGTKVGVTEAFEGHDGPITGVDYHPIGEAASHGADFSDLLLSTSFDWTIRLWSPKHHSQCLHSF-EVSEDYVYDAKW 547
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: A0A2R5G024_9STRA (Cytoplasmic dynein 1 intermediate chain 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G024_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.060e-68 Identity = 176/528 (33.33%), Postives = 260/528 (49.24%), Query Frame = 1
Query: 214 GGDLDAYIQQLITTPTPGQPTAGDGAAREGLPNASSTSPALEGSSTRTATRLSLLTISTGLGTVTVPPKVAEFYDKGCQADLGGGPSAIMGNGGTDEDGDAIGALSSAAKKTPDRRRNHLRVFGLGGRGVPVPDGSEGEDQGHHPGLFAGSPSPLRPLLRPSASTPGSASGRSFEKNGGNGMPLTPPVAAKTLSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSAR--GHGLDATSSSSLHTDADGLVLMWSMAMQ-HRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHGGNPVTVSSMALAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSPSKSLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
GG+LD I+ L++ P+ Q + AA+ +A+ T + + +SL + T LGTV V + + YDKG Q D P + + + DG G S +K+ R GG P S +P P L SA+T M T E+ + + +FL +S R VERA+ + + DI +DY E + + + + + ++ ++RW + R +TD+QWSPH EL LA Y+ R LD +S D G+VL+WS M RPEY + SPV A FHP+ +++IGGTYSGQ+V+WD RAKS+PVQR+ LS HT+PVY++ V G+ NA +L++ STDGR+ WN + +S P L + VT +S+A A GE EL VG+E G ++ +H +GV + H G VT + + S + L+LS+S+DWT +LW G P+ G+ DYV D KW
Sbjct: 83 GGNLDNLIESLLSAPSTEQDA--EDAAQTQDHSATPTQDQADDAPRGRGPIVSLKRV-TQLGTVNVALREVDTYDKGTQTD----PLDDIDDNPNEVDGGIRGPGSPTSKRRSWR----------GGSVQAAPSPS----------------TPSSPRLAESAAT----------------MTETTXXXXXXXXXXERTVLEAEPSYTNFLNQSVRVVERAMKQNSLFDITIDYGGLESNGQS--EAERITLSESISDERWSRGRTVTDIQWSPHHKELFLAAYTKRMVSSELDWARGAS---DPSGVVLIWSTHMSSERPEYVFTCPSPVHAACFHPYSANLVIGGTYSGQIVLWDMRAKSVPVQRSLLSPESHTHPVYSMTVTGSANAHNLVSVSTDGRLCVWNLANISAPTDSRQLKYNKKDVTATSLAFADGETN-ELFVGAEDGRLFRAQVHGTKAGVQSQTEAHFGPVTKMHFHKGTSATA-DLMLSASMDWTVKLWSHRSGDKPLACF-EGSEDYVFDVKW 553
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: A0A2J7R9K8_9NEOP (Cytoplasmic dynein 1 intermediate chain n=4 Tax=Termitoidae TaxID=1912919 RepID=A0A2J7R9K8_9NEOP) HSP 1 Score: 239 bits (611), Expect = 3.200e-68 Identity = 137/346 (39.60%), Postives = 191/346 (55.20%), Query Frame = 1
Query: 769 PPVAAKTLSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQ--GQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMAMQHR-PEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRA-KSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHG-GNPVTVSSMALAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSPSK-SLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
P + LS EEK+ + + FQ FL R+ R +ERA+ E+ +DI DY + GD+ G L+ ++DRW + R LT L WSP PEL++A Y ++ D DG+ L+W+ + PEY QSPVL A F F ++++GGTYSGQ+V+WD R K P+QRTPLS + HT+PVY L V GT+NA +L++ STDGR+ W+ LSQP + + L H G P+ V+ +A G+ +VGSE G +YT H +GV E Y GH G VT + A+ L L+SS DWT +LW + + P+ S DYV D W
Sbjct: 70 PAKQVRELSEEEKQMTILTEEFQRFLDRAGRLMERAVSES--VDIYTDYTGVADGDEAGDEKSGLRLSLNRCFYDDRWSRNRCLTSLDWSPQYPELLVASYH---------NNEDSPNDPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLVLGGTYSGQIVLWDNRVQKRTPIQRTPLSTSAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHGDVNN-FIVGSEEGSVYTACRHGSKAGVTETYEGHQGPVTGISAHSVQGAIDFSHLFLTSSFDWTVKLWSVKENR-PLYSFEDNG-DYVYDVAW 401
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: A0A151Z6W6_9MYCE (Cytoplasmic dynein intermediate chain n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6W6_9MYCE) HSP 1 Score: 242 bits (618), Expect = 8.290e-68 Identity = 144/368 (39.13%), Postives = 198/368 (53.80%), Query Frame = 1
Query: 790 LSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMA-MQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLS----------------HGG----------NPVTVSSMALA------QGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSPSKSL--RGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
LS EK+++ +DHF+ F RS++ +ERAL +DIL DY N D+ L L ++RW + R++TD+ WSP PELV+ YSA G D DG+VL+WS+ + +PEY + QSPV+T F F +I+GGTYSGQ+VVWDTRAKS PVQRTPLS+ GHT+PVY++ V G+ NA SL+ STDG++ WN LSQP + + L+ GG N + S +ALA E VG+E G I H G+ E + GH G +TSVD +P+ ++ ++SS DWT +LW + AP+ S DYV DA+W
Sbjct: 210 LSEYEKQQVWDSDHFKSFFTRSAKVIERALYLDDEIDILADYTQSNQSNKSSDKELRL--ISTLQDERWTKHRSVTDINWSPKHPELVVTSYSANEAGSH---------DPDGVVLVWSINNIYQKPEYIFNCQSPVMTTFFSKFHPTLIVGGTYSGQIVVWDTRAKSTPVQRTPLSSIGHTHPVYSMSVIGSTNANSLVAISTDGKLCSWNLENLSQPTETIELNSKNLQNSGSGXXXXXXQGGAQPGVTSPTTNQSSQSGLALAVTSLVFPENELSTFYVGTEEGVICQGARHGSKVGINERFRGHFGPITSVDLHPAQKGNIDFTNYFVTSSTDWTCKLWSTKKPDAPLYSF-EDYVDYVYDARW 565
BLAST of mRNA_H-paniculata_contig1206.1308.1 vs. uniprot
Match: A0A8J4Q098_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q098_9MYCE) HSP 1 Score: 241 bits (614), Expect = 2.710e-67 Identity = 137/361 (37.95%), Postives = 200/361 (55.40%), Query Frame = 1
Query: 775 VAAKTLSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALDILLDYAADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPELVLACYSARGHGLDATSSSSLHTDADGLVLMWSMAMQ-HRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSH---------------------GGNPVTVSSMALAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPSPSK-SLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW 1788
V L EK+ ++ +D F+ F +SS+ +ERAL ++DIL+DY + S+ G+ L L ++RW + R++TD+ WSP PELV++ YSA G D DG+VL+WS+ +PEY + QSPV+T F F +I+GGTYSGQ+V+WDTRAKS PVQRTPLS+ GHT+PVY++ V G+ NA SL++ STD ++ WN L QP++ + L++ G+ + V+S+ + E + +G+E G + H + E Y GH G +TSVD +PS +SSS DWT +LW + +API S DYV DA+W
Sbjct: 208 VVIPELDDFEKQNILDSDAFKSFFTKSSKVIERALYLDDSVDILVDYTLSDDSKSKS-SGKELKLVATLADERWTKHRSVTDINWSPKHPELVVSSYSANEAGSH---------DPDGVVLVWSVNNYFQKPEYVFNCQSPVMTTFFSKFHPTLIVGGTYSGQIVIWDTRAKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDAKLCSWNLENLLQPIETIELNNTKNTSSSGXXXXXXXXXXXXXXGSSIAVTSLIFPE-NELSQFYIGTEEGVVCQASRHGSKIVMNERYKGHFGPITSVDLHPSKGNVDFSQYFISSSTDWTVKLWSTKK-EAPIYSF-EDYVDYVYDARW 555
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 736.1 |
Seed ortholog evalue | 1.3e-209 |
Seed eggNOG ortholog | 2880.D7FML5 |
KEGG ko | ko:K10415 |
KEGG Pathway | ko04145,ko04962,ko05132,map04145,map04962,map05132 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000280,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005816,GO:0005856,GO:0005868,GO:0005875,GO:0005938,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007097,GO:0007127,GO:0008150,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0022402,GO:0022414,GO:0030286,GO:0030473,GO:0030705,GO:0030863,GO:0030981,GO:0030989,GO:0032781,GO:0032991,GO:0035974,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043462,GO:0044093,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045503,GO:0045504,GO:0046907,GO:0048285,GO:0050790,GO:0051179,GO:0051234,GO:0051321,GO:0051336,GO:0051345,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0061982,GO:0065007,GO:0065009,GO:0071840,GO:0071944,GO:0072384,GO:0099111,GO:0099568,GO:0140013,GO:1902494,GO:1903046,GO:2000574,GO:2000576,GO:2000580,GO:2000582 |
EggNOG free text desc. | dynein heavy chain binding |
EggNOG OGs | KOG1587@1,KOG1587@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko03036,ko04812 |
Exons | 15 |
Model size | 1791 |
Cds size | 1791 |
Stop | 1 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1206.1308.1 >prot_H-paniculata_contig1206.1308.1 ID=prot_H-paniculata_contig1206.1308.1|Name=mRNA_H-paniculata_contig1206.1308.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=597bp
MADAETVRKQRQKQLEDKRRRLEQLRKRKKDKETATITKAADDAAARAGA GDAESPSSSTSWDASRSSPGGGGDLDAYIQQLITTPTPGQPTAGDGAARE GLPNASSTSPALEGSSTRTATRLSLLTISTGLGTVTVPPKVAEFYDKGCQ ADLGGGPSAIMGNGGTDEDGDAIGALSSAAKKTPDRRRNHLRVFGLGGRG VPVPDGSEGEDQGHHPGLFAGSPSPLRPLLRPSASTPGSASGRSFEKNGG NGMPLTPPVAAKTLSAEEKKEMVQADHFQDFLRRSSRTVERALGEAAALD ILLDYAADEGDNSRGDQGQHLNEAMALHEDRWCQERALTDLQWSPHRPEL VLACYSARGHGLDATSSSSLHTDADGLVLMWSMAMQHRPEYQLSSQSPVL TARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNL HVGGTENAPSLLTASTDGRVSRWNPSQLSQPLQDMHLSHGGNPVTVSSMA LAQGEEQKELVVGSESGGIYTTPLHFRNSGVVEEYLGHHGLVTSVDANPS PSKSLRGLLLSSSVDWTTRLWHLARGKAPIQSLTHGTYDYVCDAKW* back to topmRNA from alignment at H-paniculata_contig1206:11697..24553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1206.1308.1 ID=mRNA_H-paniculata_contig1206.1308.1|Name=mRNA_H-paniculata_contig1206.1308.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12857bp|location=Sequence derived from alignment at H-paniculata_contig1206:11697..24553+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGCGGACGCTGAGACAGTGCGGAAACAACGACAAAAGCAGCTAGAGGA
CAAGAGACGAAGACTGGAACAGCTGAGGAAGCGAAAAAAGGTGGACGTTT
GTTTGATTTGATGTGCACAAGGTTTTACATACATCACATAACACGAAAAC
ACAGGCGGTCAAGTGTTTCTTGTCGAGACCAACTAGAGTAGAATGAGACA
AACAGTACAACACAGTAGCTAATGGGTTGCGAAGGGTCGGGGGGGATGTA
AAAAGTTCAATTGATTCCCGAAGTAACCCGCTCATATATTCTTGAATACT
GAGATGTATGTTCGTGGGAGAAAAGGGACCATGCATCGGTTCGTGTTTTT
TTGTCTTAATATTTTGAAACTTGTCGGGTCATGTGTCCATAACTATGCCT
GTATATGAAAGAATGAAATAATGTCTTGAATTTTATTGAGTGTTACGAAA
CAACAGACCAGCAGCCGATTGTGTAGATTTTGATAATCCAGCACTTGCAC
TCTGATACCGCGTTCATTCTTCGCCAAATCAGTAACTACAGCTGACATCG
CACAGTGCACTGCATGGTTGGTGTAGATGATGCACTTGGACCCAAGAGAA
AACAACGTTGTTACCTGGCTGTTCTAGCTGTATATATGTATGTCATATCT
GTTTCTCTACTGTCACAGTTACGACGAACGTCCAACACACAGTTGCACAT
AAAGTTAGTAAATGATTCATGTTTGCGATGTATCAATCGTGTCGCAGCAG
CCCGAAATCTGACTGCTCGCGAGCATTGTGAGAATGGCGGCACGTCGAAA
CTCTTGGGTGACCGTTTCGGCACCTCCCCTATTAACCATACCTACAAGTG
ACAACTGAAAATTGCCCTCGAAAACAAGCGTGAATTGCGAAATGGAAAAT
TGAAAATTAGGATCACTATCAGTCAGGTGTTCACACTGACATCGTCCTTA
TCACTTTGGACCAGCAAGCCTGCATCTCGACAAAAATAATGAATAGTACA
GCGGGATTGCGACGTGTTTTGGTACTTGTACATCTGTCCTACAAGCTTTC
TTAAAATGATATTTTGTAAATATCTTTCGCAATTTGGGATTTCGTGAAAA
GTAATACATATCATTCAAAAGCCTACACGTTCAGCTTGCATGTGGATATC
TTCAAAACGTTTTTTTTTTTCGAAATGGTTGAGAGCCGCGTTTGTCGTTT
TTGGAAATGACAGATTTTGCAAAAACAATCGAACAGGCCAAAATCAGTTG
GAAATCACGGTTTCCCATTGTTTTGCGAGCTTTTTCTCCATATATACGTA
ATTTTTCCAAGTGAGCGATAGCGCAAACGAGGAAGCTGAACCTAGAAGGG
AACAACAAGCTCGTAATGCCGCCGGCGCATTCTCCCGATCTCAGTATCAA
CGATTTTTTTTTTTTTTGCATCTCAGAAATCCAGAGTTTGGAGCAAGCGT
ACGTTAGACGCCCCCGTAGAAAGAGAGGATTAAGTGCATGTACAGGCAGT
ATGACGCGGATACTCTACAGTTGGTTTGGTAAAACCTCTTCAAGCGGTAC
AACCAAGACTTGAAAGCACCTATCTATACATTGGGCATACAGGGAGCAGG
AACAAGCAACGTGAGGGGCTTTTGAACCAAGTGGCCCCGATTGACAGAAC
CGATTACGACGCGACCTTCAATTGGTGGATTGATGGTGAGGACAGTAATA
AACAATGAAATAGCTGTAGAAGGTAGTTTGAAACGCCATGGGATAAAATG
CAACAAACCATTTCTTTGTCGAAGGTCTCCTTGAGACTTTTCAACCATTA
ACCATGATTTCCACCCGATTTCGGCCTATTCGGCTGTTTTTGCCCTATCT
GCCATTTCTGAAAAATAATAAACGTTTTGAAGATATTTGCTTGCAAGCTG
AACGTGTCGACTTTCGAATGATCTGCTGCATTTTTCATGAAACCCCAAAT
TGCGAAAGATATCTACACAATATTGTTATAAGCCAGACTTACGGAACAGA
GGTAGTATTTGAATTTAGAATATCAGATGTCCACGCTAGGTGAGGTGTAA
GCTGGTATCGGTAGTTTTGACAAAATTCAGGTACGTCAAGGGCTGATACA
GCACCCGGAGCGCCGTGTAATGGATGGAAAGGTGATGCAGCTGACAGACT
GAAGTGTACACATTGGGTCTCTCGAGCGGTGGCAGTCATCTGGACAGCGT
AAACAGCATGATGCCGCAGACTTGCGGCCGGCGACAAAATACACAGACGG
TACTGCTTCATGTAGTACTGTTGCATACAGCACCATTTTCGCGGCACACA
AGAGACGTCAGGGCCCCGCGTATTATCCTGAGGTTTCCCTAGCGACGATA
GCCGCTGTGTGTGAGGCGTCGTGTTATGAGTAACGGTGCCCACAGGTACC
GTAGCAGGCGGTCTGCCACAGTCAGTCGTGGCAATCGGGACATGACAACA
TGGCTGATGTATGTCGTTACGACATAGTTGGTAATTAGCAGTTGGGCTTC
CTGGAACAAAGTCGTTTCTTCCCGTTAGAATGTTTTCTCTTTTTTCCAAG
TGTAAGGGATTATGGCTATGTTGGACGAGCACTTGACATACCACGGTTAG
AGTTGAGCTGTACTGCCAAGCTCTGCAGAAAATTTCACGGCGTTTCCCCT
GGTCCCCATAAGGCTCCTCTCTACCGTCTTCGATCAGCTTTTAGAACAGC
GGTCGATTTACTGACTGTTGTTCACAGTCGACTTGAGGGATTAATGAAAA
CATGTATTGGAAAGCGCGGGTTTCCTGTGTAGAACTATGCCATCAATTGT
TCACATGTCAAGCGCACCCTCTTTATTTAGTATCTCCCTCTCAAGTTGTT
ATTTGACCACTCTATCGCTCTTGCTCCTCAAAGTGGTAATCACACCGCCT
CGGGACTACTCACGCTTGTCTCACTCAGGACAAGGAAACAGCAACGATCA
CAAAGGCCGCCGATGATGCTGCAGCGCGAGCAGGCGCGGGCGATGCAGAA
TCACCTTCCTCGAGCACCTCATGGGACGCGAGTAGATCCAGTCCAGGGGG
TGGGGGGGATTTGGACGCGTACATTCAGCAACTTATTACCACGCCTACAC
CTGGCCAGCCGACCGCTGGGGATGGTGCAGCTAGAGAAGGTGGTGGAAAC
GGTGAGATCATACATGCAAGCGTAGGGCGGCTACTGCCTGTCGTATGTTG
TGAACGCTTTTTGATCCGAAATAGATTATTTCTCGCAACGGCTACGCCTG
TGCAGTTCGTGGGCTTGTGGTTTGTCTTTTCACCATCCACCCTGCATCAA
TCAATTTATGTGTCTAAAAAAACTTGGACATGATGATCCCCACATGCATA
TTGGTCGCGCTTGCACTTTGATGCTGCCGGACAACATTTTCAAGAAGGAC
GGAGCATGGAGTGTAGCTTGTTTAGACAACGACAATGCTCAAATGTTCCA
AAAGATGACGATAACGACCTAGCCGCGTATGTAAGAGATACTTTCAATTT
ACAACTCTTGTGACTGGTTTGCTCTTCCCACCAGCTAAAGGTGTCGGCGG
CCTGCCTGCACTCACTGGTTCCCGTGGTGTCATGATTCAGGGCGCCTGTT
GAAAAAAGCACGTAGAGAGGGAGCAAAGTCTAGGCTAACTCGTGGATTTA
TACTCCAGACCTAAGCCCAACGTCTCTGGAAGTTTTTTCCAGGTGTTCCT
CGAGTACACAGTTGAAAATCTGTTCCGAAACGACACAATCTTACAATATA
TTCAAGTAGCAGAGTACGGACTCTTCCGCTGCTGGACTGTCAAATGCATT
TTCGGTTCTAAAGATTCTGGAAGCGCACTTGCCTCCGTTCGAGAACGGCA
TATCACCTCGCTAGCTGTTAGCTTGCTCAAGTTGTTCTCCGTTCCACATC
ACAGTACAGGGGGGGGGGGGTGTTTAAGGTGCGTGGTGCTGGATTTATGA
CCTCGAATTTTGTATCCATGGTCTAGGTTCTAGCCAATCATGGGCCTATA
TTTGCCTACGGGTAGAAACGCAAGCTTGGGTACTGAAAGACCCTTATAAC
AGCGTTGCGTTTTTAACCGGCACATACTTTTTTTCAAAATGATTGAATCA
CACTACTTAGATGGAGCCAGTGTGCAAAATTCAAGGCGGATCAGAGTTGA
TCAAGATTGCTTTGGGCTTAATTTTCTCACAAAAGTGGTCCAAACATGTA
CATTTTCAGGTCGTTTCCTGTACTAATATCAAGTAATTTCTGCATCCTGG
CCACACCCCGGGCATCTCAGCACTGGCAATGCGATAATCGGCAATTTGAC
CTTCCTTCTTGTCCGGTATAGACAGAAACTGTTATGGAACTCTTGGCGTG
GCCGGAACGTCTAAGAATCCGTGGTGTCTCGTGTTATGATCGAAGGCGGG
GCCGGTAATAGCTCATTTCTTAGCTCAGCGTGTTGTTGTTGATGACAGCT
TTAGGTGGGAAGAATTTAAGTAAAATTGACGCAACCTTGATTACCCTGGG
GGACTCTCCGGGCGGTCCCCGCGGGGGGATGCTGGAAGGCCTCCGGCCGG
GTTGCCTGCCGATCTCTGTTGCATTCAACATGAGCTGCGAACATGGTTTT
CATTCACGACCATGATTTCATGCCGTGGTCTGTGGCTTTATTTCTCATCG
GCACACACCGCTGCACCACCATTCACAGCGTGTGGTGTGCGCTAATCGAG
CGCTGCAGCCGTCATGCGCACAACGATGCCCATTCCTAACTTTGGTGTCC
GTACTCTCTGCGACTATCTCGACAGCGGCAGCTCCCCTCTGTCGTAAATT
CCACATGGTTCTGCCCATTTTCGCGTGGGGATTAGATGTGGACCTGGGCT
TGAGGGTCAAGCATGCCGTCGAAGGCCAACCTAGATTATGACCTCGCCTT
GATACGGCCTGTCACTCTAGCCAGTTGATTCCGTGAAAGGAGTCTTGTTG
AAAAACTGCAGCGCTGTTTTTGCGTAGGTCAGCTACCCTCCGAATCTGGG
GGAAATCTTCTAGCTGCTGTTGCCTGGACAGTGGTATCGCGTAGAGCCGG
TCCATGACGGCCGCTCTCACTCTCGTTGGTTTCGCCTGAACTCAGCAGGG
TTACCAAACGCCTCTTCAACTTCGCCCGCTTTGGAAGGAAGTAGCACGAG
GACTGCCACCCGCCTGAGCTTACTTACTATCTCAACTGGACTTGGTACAG
TGACAGTGCCGCCGAAGGTGCAGTTCCTCAAGTAGCATCAAAAAGTGTGA
CCTGTGCTGTGTTGTAGTGCGATCCATCGTTTATTGTAGACTACAGCATT
TTCCGCACTACATACCTCGAGAAGGAGTGCCAGAATCTGCCCGATTTGAG
GCATGTCGCATCATGCCTGAGTGTACTTATCTCCTTGGCTTGCCTCTACA
CACCTGTTGATGCTATTTTTCTGTACTTTTTTGGAGGGAAAAGGAAAAAT
TGTAATGCGTATGGATGTAGCACCAAGTGATGTCAAATCAATTGGCACGT
TCTTGACCCTAAAACGCGAGGATCTTGGTCGGGTTAGGCTGTCGTAGCAT
TAGTTCACACCCCCCCCCCCCCTTCCCCAGTTGTTTGTCGTCTCCATGAC
TCCTCTGCTTGCCGATAAGCCCTTGCGGTTTTGCGGGTTCGACAACATGA
ATTGCGTTGTGTTAACTCTCAACCCAGGGTCCATGGCATACTACATTGAA
GGTCCTGTGCACCTGTGCGGTAGTTGAGGCCACCATAGTTGCTTTCACTG
AGTATTGCGTCATAATCGTAACTTGAGAATGTCATATATCGCACTTGCTT
CTTGTTTTTGTGCCGGACCCTGTTGGTTATTTTTTCGCGTTCCCCCTGTG
TGATAGGTGGCAGAGTTCTACGACAAGGGCTGCCAAGCGGATCTAGGAGG
GGGTCCCAGCGCGATTATGGGCAACGGAGGGACGGATGAAGACGGCGACG
CAATTGGTGCTTTATCTTCCGCAGCCAAAAAAACGCCAGATAGGCGACGC
AACCACTTGAGGTCAAAAGTTTGATACGTACAATAAGCAATCAGCACACG
ATTTTGGAACACGTAGCGTGTCTTATGGTGATTGTAGCCAGTAGCTTCGA
GGTACAGTTTAATAAAGCACTTGATACAAGAACGCACTTGTGGTTCTGAT
TATATTTCTTCGTTGGACCAAGACTCGTGCATCAATCACCTGACAGCTGA
TTTGCGCGAGCTGCTCTGCGCCGTTCTCACGCGGTTGATGAGGAAAAGCA
CAGTCGTCCTGAGACGGAGAAGCCGTAATCATGTGGATGCTGTGCAGGTG
GTATAGACGGCTGATTTAGGTGCTTCGAGCGGCATTCGGGTAGCGTTACT
TACTTTCATTCGCGGTCACTCCGGAATTTCGTGTTCGCGTTTTTTTCTTG
TCAAGCTCAAATTTATCGCTCTGATCTACTGGTGTGCAGAGTATTTGGCC
TTGGAGGGAGGGGGGTACCAGTGCCAGATGGATCTGAGGGAGAAGATCAA
GGGCATCATCCTGGCCTTTTCGCAGGATCTCCGAGTCCATTAAGGTGCAA
TGATTGTCTGCAATACTTTAGTAGTTGGTGATAGTGTCGGCAATATCACT
TTTTAAGTTTCTAGCGCTCCACCTCCCTCCTCCGTGTTACGTGTGCGAAT
TATTGACTGGGTTGGTCTTTGTCCCTTGGTCGTGGCTGTTTGGCCACCAA
CTTTATCTTTTTTTCGTAGAATCAAGGTGACATAACACTCTAGGATATAG
TACTTGCCTGCTCTCGAGTTCCCAACACTGCACTTCGTACAATAATAATG
ACGGTCCTTTCATGGTTTGCAACAGGTGTACGCAACGGGTGACAGCCCAT
ACCTTTTCTCTTTTGCTTGAATTTGATTACGCAAGGAGGTATGACCTTAC
GTTTAGTTGCTCACTCCTTTTGCCCTGCTGACACTACAGACCCCTGCTCC
GACCATCGGCGTCAACTCCCGGCTCTGCCTCGGGCAGATCGTTCGAAAAG
AACGGAGGTAATGGGATGCCGCTGACGCCTCCCGTAGCGGCGAAGACGTT
GTCCGCTGAGGAGAAGAAAGAGATGGTACAAGCCGACCACTTTCAGGTGA
CCTTTGGTGTTACCAGAAGAAAATGTTTCCATGTACTGGTGGATAGAGTC
ATCTCATAACATGTGTCGCATCGTATCGCATCGGGTTGCGTCGCTTATGA
TATTGTAGGTTCGATACTGCACAATCCGGTCGGATCTGTGTGTGCTGACA
ATATCTAGTATTGTCAACATGACTCTAATATGCTTGGGGGCATCGAGTGT
ACTACTAGATACTCCCAAACCCACGTTTTGTTTTGCACGCCACGGTTACG
ATGGTGTGGCATTTCGTTTTTTTTGGGGCCGCGGCGTTGCCAGGATTTCC
TTCGACGATCGTCGAGGACGGTCGAGCGCGCCCTCGGAGAGGCAGCGGCG
TTGGATATTCTGCTCGACTACGCCGCAGACGAGGGGGACAACAGCAGGGG
GGATCAGGGGCAGCACTTGAATGAGGCCATGGCTTTGCACGAGGTAGGGT
AACCCATGTGAGGCACGAAAATCAAAAGATGCTTCCACTCGACATTGAAT
TATTCTGGTTGTGTTGATGAGGTGACCTGGCCCAACTGGGTTTTGCATGA
TGAAATGTTCAAGAGGTCACGCTGATAGTACCTGTTGGACAGACGAATTC
TATGTCACATGGATGAGATGCGCCTTTCCACATATGGTATGCCCTTTGTA
TATTTTTCGTGTTTACGTCGATGTGTGTATCGTCTTCATCCAGGACCGAT
GGTGCCAGGAGCGCGCCCTGACGGACCTTCAGTGGTCGCCTCATCGTCCG
GAGCTGGTATTGGCGTGCTATAGTGCACGAGGACATGGACTGGATGCTAC
CTCTTCCTCTTCGCTGCATACCGATGCTGACGGTTTGGTGCTCATGTGGT
GAGTCCATCAGTCATTTGGGGTATTCTCCATCGTATTGCAATGACAACCG
TAGCGGTTGACAGAATACATGAGCACCCTTCGCAGTGTCGTCTGTCACAT
ATAGATCTGCCAGTTTACATGGCCGTTTTGTGTTCGGTCGATCATTCAAC
TGTTGAGCTTATCGCGATTACCCGTTTTAGATCGCGAGTCCTTGTCGCAA
TTGTCTTGGGCTTGATACAACATAAGCCACGTAAAACAAGCGAGCAGACT
TAATTCGCCTTGTTGTACAGTATCGAATGTGTCCCACAATTTTTCTTGGA
ATTTGCCGCGGTCTGCATTAATATTATGGTATGTATTTGCACGACAGGTC
CATGGCAATGCAGCACCGGCCTGAGTATCAATTGTCTTCGCAAAGTCCTG
TGTTGACGGCAAGATTTCATCCTTTCGACACCCACGTTATTATCGGGGGC
ACCTACTCGGGACAGGTAAGGGCACCGACAATTGATGCCATGAAATTCTT
TCTGCATGCGGCAGCTCGAGAAACCAGAGAAATCGCGCTGAAATGCCACT
GCTCCCAGCGAATCGAATGAGAGCCCTGGAATGACCGCTGGGGAGATGTT
GTGTAGCAATCGGCATTGGACGTCTTCACGTCCAGTTTCGCAACCTTTTG
TGTGATTTGATGTTACGAGTTCTTTACCTGTATTGGAGTATGACCACCGA
CTACATTATGAATAAACAATAAATAGGGCGGCCGTCACTACCCGGCACAT
GCATGAAGGCTTAGTTCCAGTGCGATAGCGCGCGCGTTTTTGACATGGCA
GTCAAGCTCAAGAGGCAGAGAGACTTTAGGCTAAGTTGAGCCATCTGAGG
TGGAAGGCTATTATTGCTTTTCCGTCCGAGTACACATCTCCATCCGCTAA
GACAGCACTATTTAATTAGAGTTGTCGGTTTGAAATTTTTCTCGAACTCT
ACACCTTGCGTTTTACAGGTGGTGGTGTGGGATACTCGAGCTAAGTCACT
GCCGGTGCAGAGGACGCCCCTCTCCGCTACGGGCCACACGTACCCTGTCT
ACAACCTGCACGTCGGAGGTCGGTTCTGTCACTTCCCCTGCAAAACCTAC
ACCCTTGTTGGCGGCTCTTCCGTTCAATACCTGAGGACGGGGCCAAACGC
CTCACAAGTCGACGTCAGTGCAACGCATTCATCTAAGCGCTGCGCCTACT
ATACTGTAAACGAATATTGACACTCGCGTAGCCCACATCGTGACGCATGG
TTTCTTGATATTTGCGCTTGGGCTGCACCCTATGTTTACGTATAATGTTC
CAGGACATGAACGGCTATTTAGTTCTTCCGACACGTTTGTTCCTACGACG
CAAGCGTAGCAATCGTCTTATCTTGTACTGCTGCTGCTGCAATTCAGGAA
CCGAGAACGCCCCTTCACTGCTGACAGCATCCACCGATGGGCGTGTGTCA
AGGTGGAATCCCAGCCAACTGAGCCAGCCGCTCCAGGACATGCACCTCAG
GTACCGAATATTCTTGTTTCGCGGTTGCCGCCGAACAACATATTTTCTGC
AAGGTGTCTTGGAAGTATGAGAGAGGGGAGCTGATGGGTGGGCATTGATG
GCCATACGGTTGCCCGTGGGTTGCACATTGTGGGTGGCTTTTTTTTTCGT
GAAGCACTTCCTACTTCCTTCTGAAATGTGGTATTTTACCAGCACCTTGC
CTCCTCCTATGTTTTACCGTGTGGTGCAACTCGTGTTTGGCGTCAAGCAG
TCATGGTGGTAACCCAGTAACCGTGAGCAGCATGGCCTTGGCTCAAGGGG
AAGAGCAAAAGGAGCTGGTGAGGACGTACGTAAAAAGTCGCCGGCAGTAA
ATCTTTCCAAGCTGTTCAATCGATTTTTGGTGCCAAAACTCTTACCATGT
ATCGAAGTCATGACCAATTTGGAAAAGTGTACATGTCGTGGTAAAGTATT
TTCGAGTCTTGGAATCCTGGAATACTATAGCAGCAATCAAGAAAGCACCA
GACCACGAACATGGGCAAATACTCGAGTAGTGTCTCGATCAAATCTACTG
TTGGGATGACGAAACTGGCTTCGTAAGTCGTGTGTATGATTCTGTAGTTT
ACTGGGTACAACATTCGTTGGGATATGATGTTTTGGACGTTGTCATGGGG
GTGGGCATCAGGTATGTGTGGCTCCATACCGTTCATGATCAACAATGCGT
GAAGATCAGGGGCATTCATGGTGTTCCTGAACCTTGGTCGTCTACACGCC
AACTATTGGATTCCGTAACATCATCGGAACAGATGTTTTTGCTGTTTCCA
ATTCCAGATGACTAGTTCCTCAATTTCAGAACAAAATCCGTGTGCGTGTT
CTGTACTACAGCCCAAAACTTGGAACCTCTCCTCCGAGCAGGTGGTGCTT
CCTTGAGAGCCAGTCGCTTATGGGAACATCGAGTTTTCACTTATGTATAA
TTTTTTCAGCTGGAGTGATATTCGGGACGGGAGTAGTATACACGCCACAA
TATTCTACCCTCTACACTACGGTAGGTAACAGTATAAATAGTCTAATCGA
AACATATTCGTGAATCTGATTTTATATCGAAAAATAAAACGCCGCTCTCT
CAAAATGACCCATCGGCCAATAAATACCAGCTCAATCTTTCCAACGACAG
AGCTTTCGTTCTCATGTCATGAGAATAGAGTGCACCGTATTATTCCAGAA
AATCGTTTTTGAAAGATGTTGCCACGGTTGCTGTTATTCACCGAACTACA
ACAGCTAACCGCGTCAAAGCTAGCTGCGACCCCAACCCGAATTTATCAAG
GTTGTTCACCTGATTAAGTCAACCAGTTCGCGATCGATCACCTGAGATTT
TCCCTTCTTCCGGCCAGTCAGGAATTGGGTACATAAGAGAGTGCCGGTCA
TATGTATTCCCTTACCAATTGAAGGTTCAGAATTATTGTTCCGTTTCGAA
AATATGAGGTGTCGGTTCGTGGAAGTTTTGTTTGCTTGAGCTATTTGCGC
GTCTGGAGAGATTACTACCGTTCAGGGTATTTTACGCATGACCAGCAGTC
TACACATGATAACTACAGTTGCACAGGAAAAAAATTAATGTATCTTTTTC
GCATGATCAGGCCCACAAACCCGTTCTTGATCGGTCATAACAAGTACCGG
TCATCCAAAAGGCCTTCGAACTTGTGGCTTCTCAGGGCGAAGCGCCTCCA
AGAACTTTGTGCCTTGATTGCTTGGCGTGCAACATGAATATTAGAATCTG
TTGTCCGTTAATTCGACGCCAGAGGCAGGGTACATCCCTTCTCCGGGTTG
CAGAGGTCTATCAGACATTCAAGAGAAATGAATAAAGGATGGTGAAACGG
GAGAATAGGTTACGTGTAGACGTGGTCGTGTACGATGGATCTCACGCAAA
CGACTAATCCTACTGTATGTACTGCCACACTAGACCAATGTGGACAGTAC
CCGGAATCACCACAACGGATATCTTTGGCGTCCCCGTAGACAACAATGAC
TTCATGGTTTTTTGGCCTACAAGTCAGCTTGAATTCATACGAGTTTGTAG
CAAATATAGGCTTTCGAATAGCGCCAGGGGGCGAAAGATGAAGGCAAGTT
GAGGTACATGACCTTCACCCTCCGCCCCCTCCCCTAATTTCCTCCTTCGA
ACGGGGCTTTTGCCTATTTAAGATGCTGGAAAGAGCAGCGCCTCTTGTTC
GGCATCACCTGCTCAAGTGGCCTATTGACTCGACACAATATTCAGCCGAA
CATGATTGGTTCTGTTGGCGCTAAAGTGGGCGCCACCTTTTGTTCTTGAG
ATTTGTAAACGCCCGTTGACGGACAGGACCTACTAGCGGAACCATCACGT
TACCGCGATATGCTACTTTCGAAATTTTCAGAAAGACTTGAATAGTAGTC
AGCCTGTGCTTAGAGTTGTCATTTACTCGATGAGGTCAGTGAGCCACTTG
TCGCTGTTAACCGTTGTGTATTCATCTCATTTTTTGTGCTGCAGGTCGTC
GGTTCTGAGAGTGGCGGTATTTACACAACGCCTCTCCACTTTCGCAACTC
CGGTGTGGTGGAGGTGAGTTACAGGAAAATGCTGATGTTGATTACTTTTT
ACATTGTGCAAGGGCTGCTCGGATGAAGCTATCCGCTATCTCCTTGTGAT
CTCGTGATCTCTTGAGTTCAGTGTTGTGTTGAACCCGAAGGACCTCATGC
GTCTGCTATTGCTGGTGACTATTTTATCAGCGTGCCGTTAGGCATACATG
GAATTTTCGCTTTGGTTGTGTTGTCTTGAGGTAGACATGGTTTGTTTTTT
TGTTTGTTTTGGGTCTCAGCCATCTTGTTGTTTTGGGTCTCATTATTTGT
GTTTTGCTCCGTTCGTGACCAGGAGTATCTGGGACACCATGGATTGGTGA
CGTCAGTGGATGCTAATCCCAGGTGAAGTGGCATAATGTGGAAGGGGGAT
CAGCAGACTTGGGCTCTTTGCTCTCGGCGGGGTCAGTTCACTTACGAGTG
TCGCGTATGCGTTGTAAAAGCAAAGCCCAGACTGACTCTTAGCGTTCTCA
CATTGCAACCACCGTAAGCAGTTTGCACCAACAAAGGCGGCCTGATGTTC
ATTTGCATCTAGTGATGTTAGCGAAGTCGTCCACGCAGTTATTCTTCCGC
GTCAAAAATATCGCTCCGAATATGTGAAATGTTGAGGTAGTAGATATCTG
ACATGAGCGGTCACCCTGTTGGTCTGTCTGTCCATTGCTGTTCTGTCTGT
GCCGCTATTCGGTAGTCCTAGCAAGTCTTTGAGGGGACTGCTTTTGTCCT
CTTCTGTGGATTGGACTACTCGCTTGTGGCACCTGGCCAGAGGGAAAGCA
CCGATACAGAGCCTTACGCATGGTACCTATGACTACGTGTGCGATGCCAA
ATGGTGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1206:11697..24553+ >mRNA_H-paniculata_contig1206.1308.1 ID=mRNA_H-paniculata_contig1206.1308.1|Name=mRNA_H-paniculata_contig1206.1308.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3582bp|location=Sequence derived from alignment at H-paniculata_contig1206:11697..24553+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGCGGACGCTGAGACAGTGCGGAAACAACGACAAAAGCAGCTAGAGGA CAAGAGACGAAGACTGGAACAGCTGAGGAAGCGAAAAAAGATGGCGGACG CTGAGACAGTGCGGAAACAACGACAAAAGCAGCTAGAGGACAAGAGACGA AGACTGGAACAGCTGAGGAAGCGAAAAAAGGACAAGGAAACAGCAACGAT CACAAAGGCCGCCGATGATGCTGCAGCGCGAGCAGGCGCGGGCGATGCAG AATCACCTTCCTCGAGCACCTCATGGGACGCGAGTAGATCCAGTCCAGGG GGTGGGGGGGATTTGGACGCGTACATTCAGCAACTTATTACCACGCCTAC ACCTGGCCAGCCGACCGCTGGGGATGGTGCAGCTAGAGAAGGACAAGGAA ACAGCAACGATCACAAAGGCCGCCGATGATGCTGCAGCGCGAGCAGGCGC GGGCGATGCAGAATCACCTTCCTCGAGCACCTCATGGGACGCGAGTAGAT CCAGTCCAGGGGGTGGGGGGGATTTGGACGCGTACATTCAGCAACTTATT ACCACGCCTACACCTGGCCAGCCGACCGCTGGGGATGGTGCAGCTAGAGA AGGGTTACCAAACGCCTCTTCAACTTCGCCCGCTTTGGAAGGAAGTAGCA CGAGGACTGCCACCCGCCTGAGCTTACTTACTATCTCAACTGGACTTGGT ACAGTGACAGTGCCGCCGAAGGGTTACCAAACGCCTCTTCAACTTCGCCC GCTTTGGAAGGAAGTAGCACGAGGACTGCCACCCGCCTGAGCTTACTTAC TATCTCAACTGGACTTGGTACAGTGACAGTGCCGCCGAAGGTGGCAGAGT TCTACGACAAGGGCTGCCAAGCGGATCTAGGAGGGGGTCCCAGCGCGATT ATGGGCAACGGAGGGACGGATGAAGACGGCGACGCAATTGGTGCTTTATC TTCCGCAGCCAAAAAAACGCCAGATAGGCGACGCAACCACTTGAGGTGGC AGAGTTCTACGACAAGGGCTGCCAAGCGGATCTAGGAGGGGGTCCCAGCG CGATTATGGGCAACGGAGGGACGGATGAAGACGGCGACGCAATTGGTGCT TTATCTTCCGCAGCCAAAAAAACGCCAGATAGGCGACGCAACCACTTGAG AGTATTTGGCCTTGGAGGGAGGGGGGTACCAGTGCCAGATGGATCTGAGG GAGAAGATCAAGGGCATCATCCTGGCCTTTTCGCAGGATCTCCGAGTCCA TTAAGAGTATTTGGCCTTGGAGGGAGGGGGGTACCAGTGCCAGATGGATC TGAGGGAGAAGATCAAGGGCATCATCCTGGCCTTTTCGCAGGATCTCCGA GTCCATTAAGACCCCTGCTCCGACCATCGGCGTCAACTCCCGGCTCTGCC TCGGGCAGATCGTTCGAAAAGAACGGAGGTAATGGGATGCCGCTGACGCC TCCCGTAGCGGCGAAGACGTTGTCCGCTGAGGAGAAGAAAGAGATGGTAC AAGCCGACCACTTTCAGACCCCTGCTCCGACCATCGGCGTCAACTCCCGG CTCTGCCTCGGGCAGATCGTTCGAAAAGAACGGAGGTAATGGGATGCCGC TGACGCCTCCCGTAGCGGCGAAGACGTTGTCCGCTGAGGAGAAGAAAGAG ATGGTACAAGCCGACCACTTTCAGGATTTCCTTCGACGATCGTCGAGGAC GGTCGAGCGCGCCCTCGGAGAGGCAGCGGCGTTGGATATTCTGCTCGACT ACGCCGCAGACGAGGGGGACAACAGCAGGGGGGATCAGGGGCAGCACTTG AATGAGGCCATGGCTTTGCACGAGGATTTCCTTCGACGATCGTCGAGGAC GGTCGAGCGCGCCCTCGGAGAGGCAGCGGCGTTGGATATTCTGCTCGACT ACGCCGCAGACGAGGGGGACAACAGCAGGGGGGATCAGGGGCAGCACTTG AATGAGGCCATGGCTTTGCACGAGGACCGATGGTGCCAGGAGCGCGCCCT GACGGACCTTCAGTGGTCGCCTCATCGTCCGGAGCTGGTATTGGCGTGCT ATAGTGCACGAGGACATGGACTGGATGCTACCTCTTCCTCTTCGCTGCAT ACCGATGCTGACGGTTTGGTGCTCATGTGGACCGATGGTGCCAGGAGCGC GCCCTGACGGACCTTCAGTGGTCGCCTCATCGTCCGGAGCTGGTATTGGC GTGCTATAGTGCACGAGGACATGGACTGGATGCTACCTCTTCCTCTTCGC TGCATACCGATGCTGACGGTTTGGTGCTCATGTGGTCCATGGCAATGCAG CACCGGCCTGAGTATCAATTGTCTTCGCAAAGTCCTGTGTTGACGGCAAG ATTTCATCCTTTCGACACCCACGTTATTATCGGGGGCACCTACTCGGGAC AGGTCCATGGCAATGCAGCACCGGCCTGAGTATCAATTGTCTTCGCAAAG TCCTGTGTTGACGGCAAGATTTCATCCTTTCGACACCCACGTTATTATCG GGGGCACCTACTCGGGACAGGTGGTGGTGTGGGATACTCGAGCTAAGTCA CTGCCGGTGCAGAGGACGCCCCTCTCCGCTACGGGCCACACGTACCCTGT CTACAACCTGCACGTCGGAGGTGGTGGTGTGGGATACTCGAGCTAAGTCA CTGCCGGTGCAGAGGACGCCCCTCTCCGCTACGGGCCACACGTACCCTGT CTACAACCTGCACGTCGGAGGAACCGAGAACGCCCCTTCACTGCTGACAG CATCCACCGATGGGCGTGTGTCAAGGTGGAATCCCAGCCAACTGAGCCAG CCGCTCCAGGACATGCACCTCAGGAACCGAGAACGCCCCTTCACTGCTGA CAGCATCCACCGATGGGCGTGTGTCAAGGTGGAATCCCAGCCAACTGAGC CAGCCGCTCCAGGACATGCACCTCAGTCATGGTGGTAACCCAGTAACCGT GAGCAGCATGGCCTTGGCTCAAGGGGAAGAGCAAAAGGAGCTGTCATGGT GGTAACCCAGTAACCGTGAGCAGCATGGCCTTGGCTCAAGGGGAAGAGCA AAAGGAGCTGGTCGTCGGTTCTGAGAGTGGCGGTATTTACACAACGCCTC TCCACTTTCGCAACTCCGGTGTGGTGGAGGTCGTCGGTTCTGAGAGTGGC GGTATTTACACAACGCCTCTCCACTTTCGCAACTCCGGTGTGGTGGAGGA GTATCTGGGACACCATGGATTGGTGACGTCAGTGGATGCTAATCCCAGGA GTATCTGGGACACCATGGATTGGTGACGTCAGTGGATGCTAATCCCAGTC CTAGCAAGTCTTTGAGGGGACTGCTTTTGTCCTCTTCTGTGGATTGGACT ACTCGCTTGTGGCACCTGGCCAGAGGGAAAGCACCGATACAGAGCCTTAC GCATGGTACCTATGACTACGTGTGCGATGCCAAATGGTGATCCTAGCAAG TCTTTGAGGGGACTGCTTTTGTCCTCTTCTGTGGATTGGACTACTCGCTT GTGGCACCTGGCCAGAGGGAAAGCACCGATACAGAGCCTTACGCATGGTA CCTATGACTACGTGTGCGATGCCAAATGGTGA back to top
|