mRNA_H-paniculata_contig5571.13077.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5571.13077.1
Unique NamemRNA_H-paniculata_contig5571.13077.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Match: D7G864_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G864_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 8.370e-75
Identity = 172/410 (41.95%), Postives = 223/410 (54.39%), Query Frame = 2 
Query:  434 DTKQKSS----KKVRFNPQMPNAIWIADS--NYDRRSIVVDLSKTPFALFRKDAVLMAKS------NGAQPPP----------RSAVAAC---------------TQSAVASTADGRCLCARQNSPENIELKRLGSSAASRANDTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTDTEDI------SEHSEGCDGDAER-------RSEEPAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWVDLCGNGKRNELALSSICRQRGEEVIAIRSLTDGGNRMVLTQVVRRSRDNHVMRAKHYFKRVTDRSELR 1513
            D+KQ+      + VRF  Q  +AIW+ADS  +Y+RRSIVVDLSKTPFALFR+DAV+M ++      +   PPP          R+A AAC               + +A  S A      A +  P    L +L  S +S +++                                                                           H+D +D       +E +  C  + ++        +  PAFYGVW+R SSEGYEELLLSSGVPKRA A+A++KHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEP++DI+  Q YE+SM+W  L G+G+ +ELAL+SIC Q GEEVIAIRSL +GG++MVLTQ+VRR  + + +RAKH+FKRVT +SELR
Sbjct:   63 DSKQELDASPRRTVRFPHQPISAIWVADSVLDYNRRSIVVDLSKTPFALFRRDAVMMKQARTSVDPSAPLPPPGPPALSPPRLRAAAAACXXXXXXXXXRSPVGSSDAAADSDASPSPPSAERRRPGGDRLAKLWESESSESSE-------------------------------------------------------------GHTDLETDDTETDWHSDADDCCSVGSGTEEAPPCVVEQQQLRRGSNSEAGSPAFYGVWKRTSSEGYEELLLSSGVPKRAVAMAMKKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPKQDIIGKQSYEVSMNWAHLSGHGREDELALTSICHQAGEEVIAIRSLHEGGDQMVLTQIVRRPAEGYEVRAKHFFKRVTSKSELR 411
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BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Match: A0A835YHH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.040e-27
Identity = 112/415 (26.99%), Postives = 148/415 (35.66%), Query Frame = 2 
Query:  428 LEDTKQKSSKKVRFNPQMPNAIWIADSNYDRRSIVVDLSKTPFALFRKDAVLMAKSNGAQPPPRSAVAACTQSAVASTADGRCLCARQNSPENIELKRLGSSAASRANDTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTDTEDISEHSEGCDGDAERRSEE-----------------PAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWVDLCGNGKRNELALSSI---CRQRGE------------------------------------EVIAIRSLTDGGNRMVLTQVVRRSRDNHVMRAKHYFKRVTDRS 1504
            L +T ++    V F       +  AD +YDRRSI VDL++TP+ALF KD  LM                                   N P     K  G    S +                                                                               D E++    EG   D E R+EE                 P F G+W+R   EG+ ELL  SGVP++AA  A +K PVHIIDHD  YFRLI+KNGL K D  + IGDEPR +      YE+ + W     NG+   L L+SI    +  G                                     E+IA+R+L DGG+ +VL Q+VR+       RA+H FKR+T R+
Sbjct:   88 LVETSKRPKLSVHFAEDPTVVLGYADPDYDRRSIKVDLTRTPYALFHKDYYLM-----------------------------------NRPAEYSPKHTGKEGRSSS----------------------------------------------------------------------------LSDDEEELHTEGEGSSSDDEARAEEVVRQKRMISLERRRALRPNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKSGATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITARN 391
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BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Match: A0A836CAN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.250e-19
Identity = 62/149 (41.61%), Postives = 81/149 (54.36%), Query Frame = 2 
Query: 1052 PAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWVDLCGNGKRNELALSSICRQRGEEVIAIRSLTDGGNRMVLTQVVRRSRDNHVMRAKHYFKRVTD 1498
            P F GVW+R   EG+ ELL  SGVP++AA  A ++  VHIIDHD  YFRLIVKNGL+KVD  + I              E                +A ++       E+IA+R+L DGG  +VL Q+VRR       RA+H FKR+T+
Sbjct:  128 PDFSGVWKRARVEGFIELLAFSGVPRKAALSAAQRRAVHIIDHDDDYFRLIVKNGLTKVDGHYII--------------EKLKFXXXXXXXXXXXXIAAAAAPL----EMIAVRTLEDGGATLVLQQIVRRPATGEEARARHIFKRLTE 258
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5571.13077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G864_ECTSI8.370e-7541.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHH8_9STRA6.040e-2726.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAN9_9STRA3.250e-1941.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5571contigH-paniculata_contig5571:5255..12860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCalycin
Ec32 orthologEc-12_001340.1
Exons2
Model size2932
Cds size1305
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5571.13077.1prot_H-paniculata_contig5571.13077.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5571 5514..11492 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930587.884064-UTR-H-paniculata_contig5571:5254..55131622930587.884064-UTR-H-paniculata_contig5571:5254..5513Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5571 5255..5513 +
1691481360.821269-UTR-H-paniculata_contig5571:5254..55131691481360.821269-UTR-H-paniculata_contig5571:5254..5513Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5571 5255..5513 +
1622930587.9383762-UTR-H-paniculata_contig5571:11492..128601622930587.9383762-UTR-H-paniculata_contig5571:11492..12860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5571 11493..12860 +
1691481360.853343-UTR-H-paniculata_contig5571:11492..128601691481360.853343-UTR-H-paniculata_contig5571:11492..12860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5571 11493..12860 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930587.9048202-CDS-H-paniculata_contig5571:5513..65181622930587.9048202-CDS-H-paniculata_contig5571:5513..6518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5571 5514..6518 +
1691481360.8327038-CDS-H-paniculata_contig5571:5513..65181691481360.8327038-CDS-H-paniculata_contig5571:5513..6518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5571 5514..6518 +
1622930587.9208903-CDS-H-paniculata_contig5571:11192..114921622930587.9208903-CDS-H-paniculata_contig5571:11192..11492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5571 11193..11492 +
1691481360.843081-CDS-H-paniculata_contig5571:11192..114921691481360.843081-CDS-H-paniculata_contig5571:11192..11492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5571 11193..11492 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5571.13077.1

>prot_H-paniculata_contig5571.13077.1 ID=prot_H-paniculata_contig5571.13077.1|Name=mRNA_H-paniculata_contig5571.13077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp
MPTAVNDVVLETKPAAIHADSAKESSIGEAMERAPVARLATRQTMVGRMG
TQCYALLEDTKQKSSKKVRFNPQMPNAIWIADSNYDRRSIVVDLSKTPFA
LFRKDAVLMAKSNGAQPPPRSAVAACTQSAVASTADGRCLCARQNSPENI
ELKRLGSSAASRANDTGATAGTVSGPSVPSLATTSSTEAAASTAVGCSSS
GVAAAAAVAAVAVGLPETTETRQRSQFFGSWDSDESDSAGHTDTEDISEH
SEGCDGDAERRSEEPAFYGVWRRESSEGYEELLLSSGVPKRAAAIALRKH
PVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPREDIVNNQCYEMSMSWV
DLCGNGKRNELALSSICRQRGEEVIAIRSLTDGGNRMVLTQVVRRSRDNH
VMRAKHYFKRVTDRSELRKNAGISVSSNIIVTRS*
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mRNA from alignment at H-paniculata_contig5571:5255..12860+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5571.13077.1 ID=mRNA_H-paniculata_contig5571.13077.1|Name=mRNA_H-paniculata_contig5571.13077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7606bp|location=Sequence derived from alignment at H-paniculata_contig5571:5255..12860+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTATCCATCTGCCCCCATCCTCCCAATGACTTGAATGTATTAACTGTACT
GTCTGTAGTGCATCCTCTATTGTCACGACAGGCACATCCCAACTTAACTA
GGGAAATCTGTACAGGCCCTACATCGCAGTAAAAACTGTTAGTATCCCGG
CCGAGCGGGGTGCTTTCGACTTCTGTTCGACTTCCGGCCTACTGGTCGTT
TTTGTCCTTTTCTTGCGTGGTGTGTGGCCAGCGTCATCACTGCAAGCGGC
ACATCAACCATGCCCACTGCTGTAAACGACGTGGTCCTCGAGACTAAGCC
AGCAGCAATACACGCAGACTCAGCAAAAGAGTCTTCCATAGGAGAAGCGA
TGGAGCGCGCACCCGTGGCGCGTTTGGCTACACGGCAGACAATGGTCGGT
CGGATGGGTACTCAGTGCTATGCTCTTCTTGAAGACACCAAACAAAAGAG
CTCCAAGAAGGTTAGATTCAACCCCCAAATGCCCAATGCCATTTGGATTG
CGGATTCCAACTATGATCGTCGATCGATTGTGGTGGACCTGAGTAAAACC
CCGTTTGCTCTCTTCCGCAAAGATGCGGTGCTCATGGCCAAATCTAATGG
AGCACAGCCACCACCGCGATCAGCTGTAGCAGCCTGTACACAGTCAGCTG
TAGCATCCACCGCTGATGGTAGATGTTTATGCGCCCGCCAAAACTCGCCG
GAAAATATTGAGCTGAAACGTCTGGGCTCCTCGGCAGCAAGCCGCGCAAA
TGACACTGGTGCAACCGCAGGAACGGTCTCAGGACCGTCTGTGCCATCTT
TAGCGACAACATCGTCTACCGAAGCAGCAGCTTCTACGGCGGTTGGGTGC
TCATCCTCAGGTGTGGCAGCGGCGGCGGCGGTGGCGGCAGTAGCGGTTGG
CTTGCCGGAGACGACGGAGACGCGACAACGCTCCCAATTTTTTGGCTCAT
GGGATTCCGACGAATCTGATTCGGCTGGTCACACTGATACCGAAGATATT
AGCGAGCATTCCGAGGGTTGCGATGGGGACGCAGAGAGGCGGAGCGAGGA
GCCAGCTTTCTATGGGGTGTGGAGACGAGAGAGTTCCGAGGGCTACGAGG
AGCTGTTACTGAGTTCAGGGGTGCCCAAGCGTGCCGCGGCAATTGCGCTG
AGGAAACACCCAGTCCACATCATTGATCACGATGGCAGCTACTTTCGGCT
TATCGTGAAGAATGGGCTGTCCAAGGTTGACAACACCTTCTTTATCGGGG
ATGAGCCTCGCGAGGTGAGCAGCTGTTGTCTCTGAATAAAGCTGATGATT
GATGTGGGTATGTTACTTTGTGTGATGCAAGTGCTAGGTCAGTGTTTTGG
AAGTAAATGTTGATGGGATCCATAGGGTTCGAGTTGAACTTTTCAGTTTT
ATTTTGCTACCATTGTCCCTGATGGTTCTCCACCCGATCTAGGCATTTTT
TTCCCATCTCAGTGTTTTTGTCTGCAAGGCGACTGCAGAAATAGATGCTA
AGCAATATTAGTTACATCGTGAGACCTTCGACGGCCTACACGATGATTTT
GTGGCCGATCGTCCATATAGCACCGGTCATCGCTCAACAAAAACAGGAAA
CCCTCTCTCCTTCGGGATGCGGCATGTCTTTTGACGTCGTTATTCTCTTA
GTAGTTTTCTACAAAATTGTATTTGGTCGTGAAGATGCACTATTGTACTA
TCCTGTCGGTGAGAACAGACAAGGTGGAAGGCAGTTACGGAACAATTGAA
GAGAACGATCTATTTACGGGGCTGCTAGATGTGCAGACGCGCAGCTTCGA
CAGACAGAGCAGCCTACCTGGAATATCTAGATTAGTGCGGTTTATCTTGC
GCCTGCATGATGTTCAGGCACATATTAAGTTTTTCAGTTTGCGCTCTGTT
ATTGAAAATACACATTATCGACGAATCAATATATTTACTTGGATACGAAA
CTGCCCATAACCCACTTCAGCACAACAAATTTGGCAGTAGGAACCGCGTC
TGCTTGATTATGATGACTGTCGATATCACGTAGGTATGTCATCGCGTATC
ACATGAATGACAGAGCCACAAAAAAACGTCTTGCGTTGCTTTCGTTGGAG
CGCCGTCTGCATGGGCGAGCAGCCAATTTTATGTTGCAATTAGAATACTT
CCCATCTTAGTTTCGCCTTCTGCCCATAGTCACTTTCTGGGTATAGGAAA
ATAGGTGTACCCCCCACGTCAGTTGCAGAATAATAATTCCCCATTCCTAG
CGAGCGGGCAAACATGTTGCTTATGATTCCATCCATCTCGCCTATTTGTT
TTTGATTGACTGTAGTTGGTAGTGTAATTCGGTTCATGCTCCTGCCAACT
CCTCGTGCATGCCTCACAGTGAGACTCCGTACCGCTCAGGGTCAACCAGT
CCACCAACTCAAGTCAATGAATAAGTCATGATTTTTTTGGTTGACGCAGA
GGGTCAAAATGCCGTATTTTGTAATAAGGCCGCTTGTTGCAGTCGTGAAA
AAGCTTCTCTGAAAATAACTCTGGCACTTTTTTGTGTGAAATTTCCTGAA
CGGGGTTGGTGTAGGCCCATTTTTCATCGAGGTGCCTTTTCCCCTCATCT
CGCGTGGTTTTTTAGGCAGTTTCCTGTGAGATCAAAGCTATCAGGAAAAG
GTGTTTCATCATACATGCCTTTCCAATACACACTGAACCCCCTATGGATA
TGACGGTTTTAGACGATCTGTATACAGCATCTGTAGGTGACGGCGACGAG
ATCATGGCTGGGGGGCAAGCCATACTCGACCGAATTCATGTGGCAAAACT
GGCAGCAAACGCGTGTGTAGATGATATGAACGGAAAAGGGGGCAGCGGGG
GATGGTGGGGAGGTGCGTGGGATGTTCGCCAATGTTCCACAGCAGGAATA
GCTAATGCGCAGGGTTAACCCTAGGGTCAATTACGATAGTTGTTACTGTT
GTTGTGGGTGTGGGTATGTGTGAGTGACTGAATGGGAGGGGCACAATTAC
AGTAGTTGTTGCTGCTGCTGTTGTGGTTGTGGGTGTGGGTGTGTGTGAGT
GACTGAACGGAAGGGCATGCTGCGAGTGTGGATCCTATTTTCAAAATAGA
TGCAAATGATGACCACTATTACGCAGGCCAGAGAGACGTACGTGTATTGT
CACGCCTCCGCTTAGGTGCACAAATCCCCCAAAATATTCCCGACCTATAG
TAGACGGTTTGGAAGACTGTTTCCGTCGAAAAAACTGTCCGGAAAGAGTT
GACTGCCCGAATTATTTTCAGAGTTTTTTTCATGACTATAACAAGCGACC
CAAAAAAAATATTGAACTGCGGAGAATTCGAGCCTGGATTGTGCGTCATC
TACAACAGTATCTGTTTTTCTCGGCATCCCAACAGGCGACCCCTAGAAGT
TGCGGTAATAAGCTTGCGTTCGACGCAAACAGCACATCATGGTCTGAGGT
GCAATTTTTTATTTTTTGCGTCTGTTGCCGCCGTTTCATGGCTTGCCCCA
TAGGTCTCGTTGGGCATAGTTTTACGTTTGGCAAACATCTGCTGGCCTCG
CAACGCGCTCCCCAACACGTTTTGGAGCTTCTCTCTGTGTTTTCTGATTT
ATTGTTAAGTGATGAAAGATAAAAAAAATTAACAAGGCACACAAAGTAGG
CAAATATCGTATCCTAGCATGGTTAATTATTACGCCCTGAACATTTATGT
GTTGGGTGCAAGAGTGGTGAATGGGGTATGCTCTTAGACGCTGACCTGGC
CAGGACCCCTTTAACAAATCTCAACGGGTCTTTCATACCCTTCACGTGAG
GTATACGCAGCCGTTTTCTTTTGTTTGTCGTTTTACATTTTCAACCGTAT
TTTGGATTGCCATGACAGTTGTATAGTTCGCGCGATGGCTAACTGACCAG
GATACCTTGTTTCAATGGCGGGCCCACAGCGCTGCCTACAGGCAGTCCCG
ACAAATTTTGTGATTCCTTTCTCGCGGTACTGTCTCAAGTGTTAAGTGAT
TGACTGCATATATATATATATATATATATATATATTAAGCAGCAGCTCCT
CTCCTCGATGATTTCAACGTTCAACCCCAAGCGCGCCACAAGTATGCGCA
ACTTGTCCCGTTGGTAGTCCTTTCCATGCCTGAAAGTGGTGTGTGGCTGA
TTCATTATCAAGATGGCTCCTGTAGTGAAGGTCCCAAATGAGCAGTGGCT
CGCTCGTTCCCGGTTGATAGTTTAAGCCCCTGTTCGGTACTGTGTTCTTA
TCAGGTACTGTAGGATACCCAGCAGTATCCAGCATTTGCTAGCCCACCCA
CCCCCCAACCCCCAACCATTTCTTTTTTGGCAGAAGAGGCTATTTCGGCA
CAAAGCATTAATCTGACTTTTGACTTTTGAGTATCGTGCGCAGAACGATA
CCAATTCCCTATCCGTGTAGTATGCAAGAATGAAATGTCTGTACTGGACT
GGCTGTTTGAACAGCGACAGCTCCCTATTCCCCGTAATCGCGTCGCGGGC
GTCGTTTTCCGCCTGTTTTTTCAGATGGGGATTTGTTGAGGATGTTCTGG
AGACCGGCCGGCGCATGAGGGTTACAACCCCTTAACGTGCGACTCCATCC
ATTTACAGACAGTGCATATCCTAGCTTGAACGGCTGTGTAGTTTGATATC
TACGGATAGTAGTATGTGTTGTTGTTCGCCCGGCGAAGATCGCAAGTGAG
CCGCGTGTTGATGGTCAACCCACGTTCGCCCTCAAAGGGGCAATGATCAA
TATGTGGCCCATGTGGTTCATCGACGGTGTGATAATTTTCCCAGTACAAT
TCGTCATTCTGCGGGGTGGAAAAGAAGAAAATGTTGAGTTTTTTCACCTC
GCTCGCCATGACTGTACAATTGCAATGAAGGATCTGAACATGTGGTCACA
ACTGTGGCCACCCTGTGTTTTAGCACTCGTGGTCGTGGCCCGGGCTGTCA
ACCTGTCTCCCGTACTGTACTGTTTTAAGGTACTGAAGTGCTTCTTCGCT
ACTGCCACGCATACAGCCAAATTATACACGGCGATATAGCTTTTACATGT
CGAGGTAAAAAATAGGATTCCCGGTTCGCAGACTCCCTGGAGGGTTTCGA
ACTCCAAAAAAGAATCAATCCCACCCGGTTTGTTGCGAACTCTATTCTCT
TTTTGAGTAAAACAATGCGATCCATTGCGCAACTCCCGTCAATTTTTGAA
GTGATGCTTTCGACGGTAACCAAGACGTAAATCAAATCGACCGCGTGGCT
GTCGATCATAACAAGACGTAACATAAAGCTCTTTCACGTACTATCTGAAA
CGAAAGAAATACTTGGTTTAATACGGATTGGCTGGGGAGTAACACAGGCT
CCTCCTATTTTCTTACTTTTTCAACTCCTCATTTGACGCAGTTTTTTTTA
GTATCCATCGCTATGCGTATTGCAACTCATTTGCTGGGACAGTCTCCATC
TTTGAGCGTAACATCGCGCGAAGATATGGACGAGCTGCGCGATGTAAAGC
ATTATATTTTGAATATTCTTTTACTCGCCGATAACGTGGTTCATCAAATT
GTTCAAGACACTGCACCATGAACAGTACCCGAGGAGACAGGACGACACAA
CAGAGTCGTTGTCCTAATAATTATGCCGCGGAAGATGAGTAAAGAAATTT
TTTGTCATATCTCCTTTCGTTTGATCCCTTCATTCCCGCGGGATTGCTGT
TTGAAAGTACACAATCACAGGGGGCTGGCATGACGTGAGACCTCCTACTT
CGTGGAACAGACCCTGTTCTATTTTTCATTTGTCCATCGCTGCAGCTTAA
CTCCCTCTGTTCTGTCCCTTCATCCACGAGTTTAAAAAAACGCAATTTCG
GACTACTTTAGCCCTTCAAACGTGACCTTTCGTGTTAATACAGCCGCCTA
ATCCATTTTTCTCCGACCCATTCCTTCAATTTCTGCAGGACATTGTCAAC
AACCAGTGCTACGAGATGTCCATGAGCTGGGTAGATCTCTGTGGAAACGG
GAAGAGGAACGAGCTGGCACTGTCGAGCATTTGCCGGCAAAGGGGGGAAG
AAGTGATTGCCATTAGATCGTTGACCGACGGGGGAAATCGCATGGTTTTG
ACGCAGGTTGTGCGTCGATCGAGGGACAACCATGTTATGCGAGCGAAACA
CTACTTCAAGCGAGTAACGGATAGGTCAGAGCTGAGGAAAAACGCTGGCA
TCTCGGTGTCGAGTAATATTATAGTCACGCGAAGTTGAACCAAAGAAGAA
CAACAATGCCACCTCATTTACCTTGCTGGCCATCAAGGAGTACACCAGAT
TGGTTTGTGAGTAAGAAGTACGGGGATACTCTGCTCAAACTTGTGTTTAA
GATATTTAAGGTGTTTTTCTTTGTATGGACGTGGGCGTGTCACCAGCAGT
TAGCATTTTATTACTTGGCCGCTTGCAACATTTTCACCCCCGGACAAATA
CGAATACTTGCAAATGGTTTTCGCAAAAAAATGAGAATATTCGCCTGAGT
TTCAGAATGAGCGGGCATAGAACACAGTACCCACCATTCGATTTACGAAC
ATTATCAGCAGCGGTGGACGGTCCGGGGCATACAGAATATGTAAGCTCAT
TCTGAAACTCAGACGAATACTTTCAGTTTTTTGTAAAAATCATTTGCAAG
TATTTGTATTTGTCCGGGGGGGTAAACATTTTGGAACCTTATCTGGTTTT
TGGTGGTGCGATGCAAGCACTCTACCTGGTCCTCAGGGCTATGCGTCAAG
GAGTCAAGAGGGCGAGGTCCCCTTGAGGGGAAAGCGAGGGGGGCATACGC
ATGTTTTCTGTACAGACGTGCCGTTGAAAACACCAGCGAAGAGTGTGTTA
GAAGCGTGCTGTACAAGGTATCTTTAGAGGAGAGAGAGTGGAAATGTTTG
ATTGGGGGAAATTTACAGTGACCCTTCCATTTTCCGCTCAATGGACAAAC
TTTCAGTCTGCGTATATAGTAAGATGGCTTCATTCCTGGATGGTGTGAGG
TGTGTTATGAAGTCTGTCAAGAGTGTGCCGTATGTGAGATGGTGATGAGA
CAGTCTAGAGCAAGACATTCTTGATACTAGTGCGAACTTTAGTTTTTGGC
GTGTGTATTTTTCCTAGTTTTTTCGAGGCGAAAAACGCGTCATCTGCTAG
TCACATTTTTTTGCATGAATTTTCTGTTGTTGCTTGGGTGGCGTGTACGG
AACCTTTTCTGTGCGGTGCCGGCGTGGCGTATTATACGTTGCCGTCTGCG
AGTGAACAAATTTGAGATTTTCGCTGGCTTTGGAGTTTTGGAATTTTGCC
GGTCCCTTGGGACCTTGTGTACGATGGTGTGTACGATGACAGTGTTGTTG
TTTTTGGTGTGTCCGTTGTACCAGTATTATTTATACCAGGTGAATATAAA
CGTGCGATAGTTTTTGTTCATTGTGTTGAAATTGAATCTGTTATTTTGAA
AATAGTTAACAGGATAATTATTAGGCAGGATCCTATCCTTGACTTGATAT
TCTAACGCGAGTTTTGTTTACGAGACTCGATTTTAATTGAAGCAGTAGAT
ATTTGTTTGTTGTTTTTTAAATCATTTTTGTTCTCTCTGCACAAATTGCA
AGTCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig5571:5255..12860+

>mRNA_H-paniculata_contig5571.13077.1 ID=mRNA_H-paniculata_contig5571.13077.1|Name=mRNA_H-paniculata_contig5571.13077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2610bp|location=Sequence derived from alignment at H-paniculata_contig5571:5255..12860+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCACTGCTGTAAACGACGTGGTCCTCGAGACTAAGCCAGCAGCAAT
ACACGCAGACTCAGCAAAAGAGTCTTCCATAGGAGAAGCGATGGAGCGCG
CACCCGTGGCGCGTTTGGCTACACGGCAGACAATGGTCGGTCGGATGGGT
ACTCAGTGCTATGCTCTTCTTGAAGACACCAAACAAAAGAGCTCCAAGAA
GGTTAGATTCAACCCCCAAATGCCCAATGCCATTTGGATTGCGGATTCCA
ACTATGATCGTCGATCGATTGTGGTGGACCTGAGTAAAACCCCGTTTGCT
CTCTTCCGCAAAGATGCGGTGCTCATGGCCAAATCTAATGGAGCACAGCC
ACCACCGCGATCAGCTGTAGCAGCCTGTACACAGTCAGCTGTAGCATCCA
CCGCTGATGGTAGATGTTTATGCGCCCGCCAAAACTCGCCGGAAAATATT
GAGCTGAAACGTCTGGGCTCCTCGGCAGCAAGCCGCGCAAATGACACTGG
TGCAACCGCAGGAACGGTCTCAGGACCGTCTGTGCCATCTTTAGCGACAA
CATCGTCTACCGAAGCAGCAGCTTCTACGGCGGTTGGGTGCTCATCCTCA
GGTGTGGCAGCGGCGGCGGCGGTGGCGGCAGTAGCGGTTGGCTTGCCGGA
GACGACGGAGACGCGACAACGCTCCCAATTTTTTGGCTCATGGGATTCCG
ACGAATCTGATTCGGCTGGTCACACTGATACCGAAGATATTAGCGAGCAT
TCCGAGGGTTGCGATGGGGACGCAGAGAGGCGGAGCGAGGAGCCAGCTTT
CTATGGGGTGTGGAGACGAGAGAGTTCCGAGGGCTACGAGGAGCTGTTAC
TGAGTTCAGGGGTGCCCAAGCGTGCCGCGGCAATTGCGCTGAGGAAACAC
CCAGTCCACATCATTGATCACGATGGCAGCTACTTTCGGCTTATCGTGAA
GAATGGGCTGTCCAAGGTTGACAACACCTTCTTTATCGGGGATGAGCCTC
GCGAGATGCCCACTGCTGTAAACGACGTGGTCCTCGAGACTAAGCCAGCA
GCAATACACGCAGACTCAGCAAAAGAGTCTTCCATAGGAGAAGCGATGGA
GCGCGCACCCGTGGCGCGTTTGGCTACACGGCAGACAATGGTCGGTCGGA
TGGGTACTCAGTGCTATGCTCTTCTTGAAGACACCAAACAAAAGAGCTCC
AAGAAGGTTAGATTCAACCCCCAAATGCCCAATGCCATTTGGATTGCGGA
TTCCAACTATGATCGTCGATCGATTGTGGTGGACCTGAGTAAAACCCCGT
TTGCTCTCTTCCGCAAAGATGCGGTGCTCATGGCCAAATCTAATGGAGCA
CAGCCACCACCGCGATCAGCTGTAGCAGCCTGTACACAGTCAGCTGTAGC
ATCCACCGCTGATGGTAGATGTTTATGCGCCCGCCAAAACTCGCCGGAAA
ATATTGAGCTGAAACGTCTGGGCTCCTCGGCAGCAAGCCGCGCAAATGAC
ACTGGTGCAACCGCAGGAACGGTCTCAGGACCGTCTGTGCCATCTTTAGC
GACAACATCGTCTACCGAAGCAGCAGCTTCTACGGCGGTTGGGTGCTCAT
CCTCAGGTGTGGCAGCGGCGGCGGCGGTGGCGGCAGTAGCGGTTGGCTTG
CCGGAGACGACGGAGACGCGACAACGCTCCCAATTTTTTGGCTCATGGGA
TTCCGACGAATCTGATTCGGCTGGTCACACTGATACCGAAGATATTAGCG
AGCATTCCGAGGGTTGCGATGGGGACGCAGAGAGGCGGAGCGAGGAGCCA
GCTTTCTATGGGGTGTGGAGACGAGAGAGTTCCGAGGGCTACGAGGAGCT
GTTACTGAGTTCAGGGGTGCCCAAGCGTGCCGCGGCAATTGCGCTGAGGA
AACACCCAGTCCACATCATTGATCACGATGGCAGCTACTTTCGGCTTATC
GTGAAGAATGGGCTGTCCAAGGTTGACAACACCTTCTTTATCGGGGATGA
GCCTCGCGAGGACATTGTCAACAACCAGTGCTACGAGATGTCCATGAGCT
GGGTAGATCTCTGTGGAAACGGGAAGAGGAACGAGCTGGCACTGTCGAGC
ATTTGCCGGCAAAGGGGGGAAGAAGTGATTGCCATTAGATCGTTGACCGA
CGGGGGAAATCGCATGGTTTTGACGCAGGTTGTGCGTCGATCGAGGGACA
ACCATGTTATGCGAGCGAAACACTACTTCAAGCGAGTAACGGATAGGTCA
GAGCTGAGGAAAAACGCTGGCATCTCGGTGTCGAGTAATATTATAGTCAC
GCGAAGTTGAGACATTGTCAACAACCAGTGCTACGAGATGTCCATGAGCT
GGGTAGATCTCTGTGGAAACGGGAAGAGGAACGAGCTGGCACTGTCGAGC
ATTTGCCGGCAAAGGGGGGAAGAAGTGATTGCCATTAGATCGTTGACCGA
CGGGGGAAATCGCATGGTTTTGACGCAGGTTGTGCGTCGATCGAGGGACA
ACCATGTTATGCGAGCGAAACACTACTTCAAGCGAGTAACGGATAGGTCA
GAGCTGAGGAAAAACGCTGGCATCTCGGTGTCGAGTAATATTATAGTCAC
GCGAAGTTGA
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