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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 4 |
| Model size | 1718 |
| Cds size | 1392 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5567.13070.1 >prot_H-paniculata_contig5567.13070.1 ID=prot_H-paniculata_contig5567.13070.1|Name=mRNA_H-paniculata_contig5567.13070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=464bp
MSYFSSHAAWLRLLPILLAVPNAQTDPNVTCAKPTDPRGIAVHESGALYV
LDPGQGVMHEFDAVEGQYIGTVTTETGIAAGGLQVVGDYLLVCPASETNG
TMEVISLKNGTVVNTFSGEEEVVTPGGYDVAVDANGTVYVSNYVDVGVKV
YNGTTTEYLGSVIEDTQVMGLAFGPDDILYATVPEVDEVRRFARSSDGTD
FALIDAPITGVGGSRNRVGTWGIAINQEDYLIYVVWKDSKEVTEYDSAHR
EVRWWGVGEVKTWWTSDPYTTAESASTTSSGWGAVNSNSTDMTPWFVAID
TDGDIYITASEEIEGGVGVDRDVFKYDGTSGGVIGRLSNCLGDGSNWTET
PTASPTAAPTTLEELMATSSPTVLDRAISTSSLSPSSVAPTASSSSLIMP
YVYTPSPANANTTASESGNDDTDEAEAVSSRACHTGGMGVSGYQSFMRGV
VVVLLLFFGYFQG* back to topmRNA from alignment at H-paniculata_contig5567:2967..10096+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5567.13070.1 ID=mRNA_H-paniculata_contig5567.13070.1|Name=mRNA_H-paniculata_contig5567.13070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7130bp|location=Sequence derived from alignment at H-paniculata_contig5567:2967..10096+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGCGTTCCGCATTTTTCTTGTTCTCAGCACAGCAGCCAACAGCGCCCAA
GGAATTGGCCGAAGAAGAAGCTACGCTTATATTTTGATTGTTATCAGTTG
AGTTGACGAGGCAACTTCTCCTTCTTGCTGCTCTGCGACGCTGTCGAAGA
ACGTGGAGGCAGTCATCAAGGCTGTATCAACAACCGAAGGTACATGCAGC
AATAAACTTGCGACACGTTAGGCATATACATATAAGTGTCGAGTTGTACA
ACACGTGTACATGGTACAGTGGAGAAGAACCGAGATAGACAAGATTTTCA
CGCATTAGGTCCTCGTGTATAGATACATGTGTGCAGCAGACAGCTCCAAC
AAACTCTTTGGCTATTCACTACTTCGCACGCGACTTTGGAGGTTGGAGGT
AGTTGGAACGAGGGCTGGCGGCTCAGCGTGTAGATACTGAAAGGGATTCG
AACAGACACAAAGATGAAACGGAAAATCACAGGCCCATTGTTACCTACAG
TAAAATTGGGTGATCTGTTTCCCAGTCAACTGAATCTTTGCAAGTGGGAT
GCGAGAAAATAATTACCAGCAAACTAACGCGCCCTCGAAGCCTTGGCAGT
TGGTCAGTTAGTCTGCAACTAGTAGAGCAAACCCGGGCCTATCGTCGTTC
AAAATTGACAGATAGGCTGTGAACAACGCGTGACAGATGCTAGTCCATAA
TGCGGGCCTCCAGCGTATTATTGTCTGTACAACCCGATGCGTATGTGCAG
TAAAAACTCAGCGAGTTCAGACACGCAGAGGTTTTTGGTTGCGTTCCATG
CGAAACCTGTGTGCCTGTTTTTTCTTCGTCGTGCACTGTGTCCATCGGGT
GTAATCGTAGCCGTGGATGTAACGGTAAATGCTGATGGAGGTTGGAAATC
ATGCAAGATACGGCCGGCCTGGTTTCCTCACAAAACTCTCGTGGAACCTT
GGAACAAATAGAACGTTCAGGCAGTCGTTCACCGTATAAAACTTCAACTG
TTCTCCTATTCGCTCACTCTGCATGCAGGTGAGTGCGGTATATTATCCAA
CCATCGGTTTGATTTGAAGTTTGGGACTTACCTATACACCACGTAAGTAT
GTCCTCTTGGTGTAGGCACGGCTAGTGCAATACTCTCTGTCCGATATATG
ATCCGAAATCACCTTTAGATTTGGGATCAAGCGCTCAGGAGAGGTCTTGG
TGGGATTTAAGGATACCACCAACAAGGCAATGCTATGTGAGAGCTGTACA
AGTAAGAATAGGAAACATGTTGATAGTCAATCAAAACGAACAAAATTTCA
TGGGGAAGTACGCGCTGTGCGCCGAATAACAACGCAAGTGGCGTACCTTT
CTTTGTTAAAAAAAGACAACAACGAACCGTTGAAAACAGCAAAGTACACT
CGACCAACGCCCAATGAAAATACCACTCTATACGTAACTGACGCTCGCCA
AGGAATGTGATACAGGAATATAACGTTTCAATTAAGGGAAGCGATACGGG
GTGGTTAATGGCCTAAAACCGGTCCCAACGACCAAAACGAAAATCTCCTC
GTTGTTTCGGCATCACAGCCCAAAAATTACGTTTTACTTGATTCAAGTAT
CGAGCTGGCTAATGATTTACGAAGTACTGTGATCTAGTGCATGTGTAGTG
GCGGTATTGGATTCATCTTATATTGGTGACGCACGTCATGGACAAGGTAT
ATTTCAAAATATTTCTGTCCGTAGCTCGCTCATTTTTCTGTTTGGACAAA
TTCGCCACTGCACTTCCACTAGTACTAGTCACAGCGAGCACAACAAACTG
CGCACGATTCCTTGCAGTTGCCAACGAGATTTGCCTCACTAAAGATCGCA
TGGTTTCTGAGGTTTCAAAAAAAGGGATTGACACCGCACAAAAATTTGAG
GTGGGTCTAGTCGCCGGCGAGACAGGAGCCACCTCGCGGCCGTTGTACAA
TAGACAGTATAGGCAGTAGACTAGATCCCTTAACCAGATCTGCTTCACCC
CGTTCTATGCGTTTAGTAGCTGTACGGCTCAGCGAGTATGGGCACCCGTC
GAAAAACCAGGGCACCAGGCAGAGTGGGAAAAAGTAAACAGCTAGCCCGA
AAACTGTTCAAAATGAGAACTGGTAGAAGCCCTTCGAAGCATGAAGTTGC
GCATAAATTGAAACGCGCCGTGGAGAGAGATGATTTGTCGTTGTCCGAAG
CGCCGCAGGTGGTATTGGCCACAGGGTTCGGGGGTGTGACCCAGACGGTA
TTAGGCGACAGCTCGGATAGTGTGTTGTGCGGACGAACTTACTTCATTTA
GTTCGATGGACTCTCGCGGGCTCTTGCGTATGCCTTTCTGATTGGCTCAT
TAAAAGCAACCGGTTAGGTCTGAAACAAACAAAAAAAAAAACTCGGGGAC
AGGTTTTCAACCATGGACCACCCCTATCGCTCCCCACACAGCTATTGTTT
GCCGTAATCAGCACGCCGCAAGCGTCAAGCATACCAGCAGTGCAGCACAT
TCTCGAGGATGGGCTCAGTGGAAAATCCGCTGCAGGTGCACACAGTTCGG
GCAAATATCTAGTAGCCCCCCCAACAGGTGAAATGGGATCCGTGCCCGGA
AGAAGGAAGGTCCGGGCCACATACGAGTATGGACATTCGCGTACCAGAAT
CAGTCTATCAATCTATAGTGATCGCTGATGTACTCCCCGCCATCTCCTTC
CCTTCCCACCCCCTGCGCGTGCGCATGCGCATGCAATATCTCTCCCTCGC
CCCCCACCTCCAATCATGGTATTGTTGCCTGCACTAAAAATCAGTGGTTC
CACTACTACACTTGGAGACAAAATGAGTTATTTCTCCAGTCATGCGGCGT
GGCTCCGCCTACTGCCGATCCTCCTGGCCGTCCCAAATGCGCAGACGGAC
CCAAACGTGACGTGCGCTAAGCCCACAGATCCCAGAGGTATCGCGGTGCA
CGAGAGCGGTGCGCTATATGTGCTTGATCCGGGACAGGGGGTGATGCACG
AGTTCGATGCCGTGGAAGGGCAGTACATTGGAACCGTCACTACTGAAACG
GGGATTGCCGCCGGTGGGTTGCAAGTTGTGGGGGACTACTTGCTCGTATG
CCCTGCGTCCGAGACGAACGGCACCATGGAAGTGATTTCCCTCAAGAACG
GAACGGTGGTCAATACTTTTTCTGGCGAGGAAGAAGTGGTTACTCCCGGA
GGATACGATGTCGCCGTGGACGCTAACGGCACCGTGTATGTGTCCAATTA
CGTAGACGTCGGAGTAAAGGTATATAACGGAACGACGACCGAGTACCTGG
GGAGTGTTATCGAAGACACGCAGGTGATGGGGCTTGCGTTCGGCCCTGAT
GACATTCTATATGCCACCGTACCCGAGGTCGACGAGGTACGGAGGTTTGC
AAGGTGAGAAATGATCCATTTTCGATTTTCGAGAATTTAGGGGGCAAAGC
AGGTGCTTAATGATGAGGGCGAGAGGCTGCATGAGTGGGTTTGCAATATA
ATAGAAGGAGGAAGGTGGGGTGAAACATTATTTAGTCGATATGTTCTCTT
GGCTGCCGTGTTTACAACTATCCTGGAAACACGTTCATTTAGTTTTCGAG
GGGAAAGGGACGCATCCCAGCAGAGTACGTTAGTTTACACAGCACACACT
ACGGTCTGCTTGCGTCCGTTTGACGGTAATGTAGAGTGGGGCAATGTTGC
ACGTACGTCTCGTTGATTATCGTACTGTAATGTTATATGTAGTACAACGG
TCATGCTAAAGGGTTGTCAGGTGAAATGTACTTCTCACGCGGCGTACATA
TGGGTGAAGTACCACACGTCGTCACTTGACTGAAATGCATAGCACAACGG
AGCATATTATATACTTGATTTGTTTCCTGTGCGGAGGTTTCGACGGATCT
GTATCCCATCACATGGGTATCCCGATGTCGATTTTGCCAGGCTGAAGTAC
GAATTGTAATGAAGTATTCGCCGACTGTAAGGTCGTGTGCTAAAAGCCGA
AAAATAAGAAAAACAGTTACTGTGCTTGGCCTGTAGGTGTGTGCACGCGT
GAACAGTTCCCTTCAACATCTGCACAAACCTGCAGACCAATCGTTGTAAT
TTTTCTTTGTTTCAGCGCAACTAGGAAAATCTCTAGACTACAGGTGTCAC
CGAGCCATGTTCCTATCGCTTTCTAATCCCTCCCGTCCTTAGGTCTTCAG
ATGGGACGGATTTCGCACTCATCGATGCGCCGATCACGGGCGTGGGTGGA
TCACGTAACCGCGTCGGGACATGGGGCATAGCCATTAACCAAGAAGATTA
TCTGATCTACGTGGTCTGGAAGGACTCGAAGGAAGTGACAGAGTACGATT
CAGCCCATCGGGAGGTGAGGTGGTGGGGTGTTGGAGAGGTTAAGACCTGG
TGGACTTCTGATCCTTACACCACCGCGGAGAGCGCTTCCACGACATCGTC
GGGTTGGGGGGCTGTGAACAGCAACAGTACGGACATGACGCCGTGGTTTG
TCGCGATCGACACGGACGGCGACATTTACATCACAGCATCGGAGGAGATT
GAAGGCGGGGTGGGGGTCGACAGAGACGTGTTCAAATACGATGGCACGTC
GGGCGGAGTGATTGGCAGGCTGTCGAACTGCTTGGGAGGTGAGAAATAAC
GGGAAAGAGGCGCGTGCATGCATGCCTGGTTGCACGTTTTGTTGCCCTTG
AAGTTTGTGCTTGGTTGCAAGCGACAGGTATTCCTGTACTTCCGTCTACT
AAGGGTGTGTCTCAGCTTGTCTTCTTCCATAATAAGTTTCCAACTTATAA
ATGAGGTTCAATCCTACAACAGTGTTTTCCCTGCGCTAAAGTCATGACCA
ATGACCTTTATTTGGAGGAACCAATGCTTCCTCGATCGTATTTCATTACT
TGCGTGCCCCCACAGCGTTGTGCGAAAGCTCCCCTTTCGGGCTCAGAATG
TCGCATTTTCCCCTTCGAAATCGTGGCGAAAAGGGCGATTTCTCACAACG
TGGTGAGGGCACAGAAGCAGTGGAAAACTCCCAAATAGTTACAATACGAT
CAAGGGGGCATTGGGTCCTCGAAATATAGTCAACTAGTCTTGACGTTAGG
TGAGGGAAAGCGCTGTTTTGGGGTTGAACCTTATTTTGGGAGACACGCTC
TGTACAGCAGGCGAGTGACGGCACCAGACCACGCTGCCATATCGTGAAGG
AGTGATTCTGAAAAAATAAGGGATTAGGGATTCAGGTATACCTAAATAGT
TCCAGAACATTCTCAGGCACAGTCGTGCGACTATGTGATCCGCCCCGATG
CGGCTTTAATCGCGTGGGGTTACATGCATGTTGAATACCACCCCCTTCCG
TATTGAATCTCTAGACTAGGTTATATACCACTTTCCCTGTAGTGGTGTAT
AAAATTGAGGGTGTCTTGAGACAATAAACATCAACGATGAAGATACATAC
ATATTCGGACCCTGACATCGTTTTAGTGGCTATCAAATGAACATGTTTGA
CTTCAATAACCATCACTCACTGGCAATTTTACCCCAAACCCGTTATGCTG
ACCCTCATGTTAGGGACCGTTTGTGTAATTTGTCAGTGAAAGCATTTTTT
TAAGGACTGAAAACCGATATTAATTTTCCTCGACCCCGAGTTAGTCTTAG
AAACTCTTCTACAAGCTGGTTCGCGCGGGTTTTAGTCGACTTCGTGTTTG
ATGATTGGCTGACACAGCGTCATACCTGCCCCATAGCCACAAACTAAGCA
AGTGGACCTGAGATTTTCAACATTTCTGCGCAACCTGTACCTGAACCTCG
GACAGCACCTGTATCTGGCAGGCAATTTTTTCCGAGGCTAACCACAAATC
ACGCTGGAAGGTACCACCCGACAGCATATGCAACAGTGGCAGGAACACAT
ATATTTCACTTCTTTCTGCTAATTTTCTCTGCAAGATGAACTCCCGCCTC
TGTTGCACTCTTTTCAGGTCTGATATCCGATCACAAATCGATGGCTGTGA
AAACAACGCAAAATGAGCACATCAACGTGTGATGCGCATATTTTAACGAA
AGTATAGAGTGACTTGTGCGTACTATTTGAAGCGAAGAAAGGGTGCTGTT
GCTTTCGTGACATACATCTCTGGCGGCACCACTGCAGGGTTGTTTTCGGT
TCCCCACAACCAGAGCCGTTTGTCAGGTAGGGTCTATGGTACTGCTAGGA
GTGAGGAGCGCCCCACCTTGAAGGATTGCAGTGTGCCAACTACAGGAGGT
GTCCAAAGCATGCCGGAATTTCCGTAAAACGACGTGGAAACACCCGAGCG
TCACAAGCAATACAACACGATTCGTCCTGATGGAATTTGCATGCATCAAC
TTCAAGAGCTGGTGGTATTGCAAGTCAGAAGGCCTACACCCTGGATCAGC
TTGTTCTCATTCAGGGGGTCATGCTCATACTGTACCCACCCACAGCAAGA
CGAGAATTATGATAGTTGTTCACATGACATACAAAACCCTATTTTCCTTG
CGCAAGCATATATATATATAAATATATATATATAAATAAATAAATATATA
TATATATATATCTGGGCTCAAAACTCCGTACGCCCCAGCTTCTGATGGTC
TTCGCCCGATGATGTCCTTCTCATAATCCGTTGCCTTTTTCGTTTCTCCG
GCGCAGACGGGAGCAACTGGACGGAAACCCCTACCGCTAGCCCTACCGCG
GCCCCTACTACATTGGAGGAGTTGATGGCTACCTCAAGCCCTACCGTCTT
GGATAGGGCAATCTCAACATCGTCGTTGTCACCGTCGTCGGTAGCCCCCA
CCGCCTCTTCCTCCTCGTTAATAATGCCCTACGTTTACACCCCTTCTCCC
GCAAACGCAAACACGACGGCGTCAGAGTCAGGCAACGATGACACTGACGA
AGCAGAGGCAGTCTCAAGTAGAGCATGCCACACTGGCGGGATGGGAGTGA
GCGGGTATCAGTCATTCATGAGAGGAGTGGTGGTGGTGTTGTTGCTGTTC
TTTGGATATTTCCAGGGATAAGGCTAGTATACATATACATACACACACAC
ATATATATACACACACACATACAGCACCTGCGTGGCTCCGCGGTCAGCCT
TAAGACCAAGTGACATCCGCAAGATCGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig5567:2967..10096+ >mRNA_H-paniculata_contig5567.13070.1 ID=mRNA_H-paniculata_contig5567.13070.1|Name=mRNA_H-paniculata_contig5567.13070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2784bp|location=Sequence derived from alignment at H-paniculata_contig5567:2967..10096+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTTATTTCTCCAGTCATGCGGCGTGGCTCCGCCTACTGCCGATCCT
CCTGGCCGTCCCAAATGCGCAGACGGACCCAAACGTGACGTGCGCTAAGC
CCACAGATCCCAGAGGTATCGCGGTGCACGAGAGCGGTGCGCTATATGTG
CTTGATCCGGGACAGGGGGTGATGCACGAGTTCGATGCCGTGGAAGGGCA
GTACATTGGAACCGTCACTACTGAAACGGGGATTGCCGCCGGTGGGTTGC
AAGTTGTGGGGGACTACTTGCTCGTATGCCCTGCGTCCGAGACGAACGGC
ACCATGGAAGTGATTTCCCTCAAGAACGGAACGGTGGTCAATACTTTTTC
TGGCGAGGAAGAAGTGGTTACTCCCGGAGGATACGATGTCGCCGTGGACG
CTAACGGCACCGTGTATGTGTCCAATTACGTAGACGTCGGAGTAAAGGTA
TATAACGGAACGACGACCGAGTACCTGGGGAGTGTTATCGAAGACACGCA
GGTGATGGGGCTTGCGTTCGGCCCTGATGACATTCTATATGCCACCGTAC
CCGAGGTCGACGAGGTACGGAGGTTTGCAAGATGAGTTATTTCTCCAGTC
ATGCGGCGTGGCTCCGCCTACTGCCGATCCTCCTGGCCGTCCCAAATGCG
CAGACGGACCCAAACGTGACGTGCGCTAAGCCCACAGATCCCAGAGGTAT
CGCGGTGCACGAGAGCGGTGCGCTATATGTGCTTGATCCGGGACAGGGGG
TGATGCACGAGTTCGATGCCGTGGAAGGGCAGTACATTGGAACCGTCACT
ACTGAAACGGGGATTGCCGCCGGTGGGTTGCAAGTTGTGGGGGACTACTT
GCTCGTATGCCCTGCGTCCGAGACGAACGGCACCATGGAAGTGATTTCCC
TCAAGAACGGAACGGTGGTCAATACTTTTTCTGGCGAGGAAGAAGTGGTT
ACTCCCGGAGGATACGATGTCGCCGTGGACGCTAACGGCACCGTGTATGT
GTCCAATTACGTAGACGTCGGAGTAAAGGTATATAACGGAACGACGACCG
AGTACCTGGGGAGTGTTATCGAAGACACGCAGGTGATGGGGCTTGCGTTC
GGCCCTGATGACATTCTATATGCCACCGTACCCGAGGTCGACGAGGTACG
GAGGTTTGCAAGGTCTTCAGATGGGACGGATTTCGCACTCATCGATGCGC
CGATCACGGGCGTGGGTGGATCACGTAACCGCGTCGGGACATGGGGCATA
GCCATTAACCAAGAAGATTATCTGATCTACGTGGTCTGGAAGGACTCGAA
GGAAGTGACAGAGTACGATTCAGCCCATCGGGAGGTGAGGTGGTGGGGTG
TTGGAGAGGTTAAGACCTGGTGGACTTCTGATCCTTACACCACCGCGGAG
AGCGCTTCCACGACATCGTCGGGTTGGGGGGCTGTGAACAGCAACAGTAC
GGACATGACGCCGTGGTTTGTCGCGATCGACACGGACGGCGACATTTACA
TCACAGCATCGGAGGAGATTGAAGGCGGGGTGGGGGTCGACAGAGACGTG
TTCAAATACGATGGCACGTCGGGCGGAGTGATTGGCAGGCTGTCGAACTG
CTTGGGAGGTCTTCAGATGGGACGGATTTCGCACTCATCGATGCGCCGAT
CACGGGCGTGGGTGGATCACGTAACCGCGTCGGGACATGGGGCATAGCCA
TTAACCAAGAAGATTATCTGATCTACGTGGTCTGGAAGGACTCGAAGGAA
GTGACAGAGTACGATTCAGCCCATCGGGAGGTGAGGTGGTGGGGTGTTGG
AGAGGTTAAGACCTGGTGGACTTCTGATCCTTACACCACCGCGGAGAGCG
CTTCCACGACATCGTCGGGTTGGGGGGCTGTGAACAGCAACAGTACGGAC
ATGACGCCGTGGTTTGTCGCGATCGACACGGACGGCGACATTTACATCAC
AGCATCGGAGGAGATTGAAGGCGGGGTGGGGGTCGACAGAGACGTGTTCA
AATACGATGGCACGTCGGGCGGAGTGATTGGCAGGCTGTCGAACTGCTTG
GGAGACGGGAGCAACTGGACGGAAACCCCTACCGCTAGCCCTACCGCGGC
CCCTACTACATTGGAGGAGTTGATGGCTACCTCAAGCCCTACCGTCTTGG
ATAGGGCAATCTCAACATCGTCGTTGTCACCGTCGTCGGTAGCCCCCACC
GCCTCTTCCTCCTCGTTAATAATGCCCTACGTTTACACCCCTTCTCCCGC
AAACGCAAACACGACGGCGTCAGAGTCAGGCAACGATGACACTGACGAAG
CAGAGGCAGTCTCAAGTAGAGCATGCCACACTGGCGGGATGGGAGTGAGC
GGGTATCAGTCATTCATGAGAGGAGTGGTGGTGGTGTTGTTGCTGTTCTT
TGGATATTTCCAGGGATAAACGGGAGCAACTGGACGGAAACCCCTACCGC
TAGCCCTACCGCGGCCCCTACTACATTGGAGGAGTTGATGGCTACCTCAA
GCCCTACCGTCTTGGATAGGGCAATCTCAACATCGTCGTTGTCACCGTCG
TCGGTAGCCCCCACCGCCTCTTCCTCCTCGTTAATAATGCCCTACGTTTA
CACCCCTTCTCCCGCAAACGCAAACACGACGGCGTCAGAGTCAGGCAACG
ATGACACTGACGAAGCAGAGGCAGTCTCAAGTAGAGCATGCCACACTGGC
GGGATGGGAGTGAGCGGGTATCAGTCATTCATGAGAGGAGTGGTGGTGGT
GTTGTTGCTGTTCTTTGGATATTTCCAGGGATAA back to top
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