prot_H-paniculata_contig5565.13069.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5565.13069.1
Unique Nameprot_H-paniculata_contig5565.13069.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length169
Homology
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BLAST of mRNA_H-paniculata_contig5565.13069.1 vs. uniprot
Match: D8LMU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU4_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 9.130e-15
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:    5 DDLFLRAETGDPTALMVVGYMYMVGHNEFALERDYVMAEQLFQRAIRGGEVRAYVYLGWMHHHGYIG 71
            DD  LRAE GDP+A M++GY++MVG  E  +  D+  AEQL   A++ G+   Y YL WMHH+G+IG
Sbjct:  333 DDALLRAEAGDPSATMMMGYLHMVGSEEMGITPDFAKAEQLMWEAVKNGDPGGYAYLAWMHHNGHIG 399
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BLAST of mRNA_H-paniculata_contig5565.13069.1 vs. uniprot
Match: A0A6H5KB87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB87_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.440e-14
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0 
Query:    5 DDLFLRAETGDPTALMVVGYMYMVGHNEFALERDYVMAEQLFQRAIRGGEVRAYVYLGWMHHHGYIGDH 73
            DD+ LRAE GDP+A M++GY++MVG  E  +  D+  AEQ    A+R G+   Y YL WMHH+GY+G H
Sbjct:  124 DDMLLRAEAGDPSATMMMGYLHMVGSEETGITPDFAKAEQ----AVRNGDPGCYAYLAWMHHNGYMGGH 188
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5565.13069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMU4_ECTSI9.130e-1550.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB87_9PHAE1.440e-1450.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..81
e-value: 1.7E-9
score: 39.7
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 11..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5565contigH-paniculata_contig5565:75..2859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5565.13069.1mRNA_H-paniculata_contig5565.13069.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5565 59..2859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5565.13069.1 ID=prot_H-paniculata_contig5565.13069.1|Name=mRNA_H-paniculata_contig5565.13069.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
MDPHDDLFLRAETGDPTALMVVGYMYMVGHNEFALERDYVMAEQLFQRAI
RGGEVRAYVYLGWMHHHGYIGDHHHHDEGNKTPGAVNPDKEGQQQHSQSA
VYKTQVLQQLESLYGDKGARVPETEAEMQRYAAKRWGEWVLAKDRDTRKK
KRKPSRVYKFKGGEPLDTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf