prot_H-paniculata_contig556.13062.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig556.13062.1
Unique Nameprot_H-paniculata_contig556.13062.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length104
Homology
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 8.130e-44
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPAT 104
            T+RPLVYISR+T  NE NWDV+ LEC ALVWAI+KLRV+LYGI F+AFTDHQPLL++IS+ EKKP+VQRMCD LS + F L Y+ GK NQ+ADALSRLP P T
Sbjct:  399 TVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPT 501          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.800e-42
Identity = 72/103 (69.90%), Postives = 86/103 (83.50%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPAT 104
            T+RPLVYISR+T  NE NWDV+ LEC ALVWAI+KLRV+LYGI F+AFTDHQPLL++IS+ EKKP+VQ MCD L+ + F L Y+ GK NQ+ADALSRLP P T
Sbjct:  250 TVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQHMCDFLTAYSFTLSYRKGKDNQVADALSRLPQPPT 352          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5KPU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPU9_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.490e-38
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPAT 104
            T+RPLVY+SR+T  NE NWD TDLE  ALVWA+KKLRV+LYGI F   TDHQPL +Y+SLSEKK +V RMCD LS +QF+LRYK G  NQ AD L RLP  AT
Sbjct:  106 TMRPLVYVSRSTLPNECNWDTTDLEMGALVWAVKKLRVYLYGIPFVVHTDHQPLTSYLSLSEKKLRVHRMCDFLSSYQFSLRYKKGNDNQAADMLFRLPQSAT 208          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5KKY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY6_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 9.740e-38
Identity = 67/103 (65.05%), Postives = 78/103 (75.73%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPAT 104
            T+RPLVY+SR+T  NE+NWD  DL   AL W +KKLRV+ YGI F   TDHQPL  Y+SLSEKKP+V  MCD LS +QF+LRYK G  NQ+AD LSRLP PAT
Sbjct: 1308 TMRPLVYVSRSTLPNERNWDTADLGMGALFWVVKKLRVYSYGIPFVVHTDHQPLTAYLSLSEKKPRVHGMCDFLSSYQFSLRYKKGNDNQVADMLSRLPQPAT 1410          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5K8H1_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H1_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 3.950e-32
Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQL 92
            T+ PLVY+SR+T  NE NWDV+ LEC ALVWAI+KLR  LYGI F+AFTDH+PLL++ S+ EKKP+VQRM D LS + F L Y+ GK N++
Sbjct:  371 TVSPLVYVSRSTLPNEANWDVSSLECGALVWAIRKLRDCLYGIPFEAFTDHKPLLSFFSMGEKKPRVQRMGDFLSAYSFTLSYRKGKDNRM 461          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 3.200e-30
Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVP 102
            T+RPL Y+SR+T  NE+ W  T+LEC A+VWAIKK R   YGI F  ++DHQPL N  SL+EK  +VQR  D LS + + L Y+PGK N  AD +SRLP+P
Sbjct:  304 TVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLP 404          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5KXJ0_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ0_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.790e-24
Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPA 103
            ++RP+VYISR T   E+NW V DLE   +VWAIK+LR +L+  KF  ++DH+ L +   + E   +VQR  + LS F + L+Y+ G  N  AD LSR+P+PA
Sbjct:   36 SVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFVIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRMPLPA 137          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5L1K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K5_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 5.440e-24
Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVP 102
            ++RP+V+ISR+T + E+NW   DLE  A+VWAIK+LR +L G  F  +TD+Q L N   + +  P+VQR  + L+ +Q+ L+++PG  N  AD LSRLP+P
Sbjct:  558 SVRPIVFISRSTLDAERNWTPLDLEAGAIVWAIKRLRRYLRGTHFQIWTDNQALENISKVGDHSPRVQRWLESLTAYQYTLKHRPGSSNSNADMLSRLPIP 658          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5JPT7_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT7_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.550e-23
Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPA 103
            ++RP+VYISR T   E+NW V DLE   +VWAIK+LR +L+  KF  ++DH+ L +   + E   +VQR  + LS F + L+Y+ G  N  AD LSRLP+PA
Sbjct:  161 SVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRQGSANGNADFLSRLPLPA 262          
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Match: A0A6H5K764_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K764_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.750e-23
Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    2 TLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFTDHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVPA 103
            ++RP+VYISRTT   E+NW V DLE   +VWAIK+LR +L+  KF  ++DH+ L +   + E   +VQR  + LS F + L+Y+ G  N  AD LSRLP+PA
Sbjct:  140 SVRPIVYISRTTLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADFLSRLPLPA 241          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig556.13062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L269_9PHAE8.130e-4471.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH5_9PHAE1.800e-4269.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPU9_9PHAE1.490e-3867.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKY6_9PHAE9.740e-3865.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8H1_9PHAE3.950e-3262.64RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KRW3_9PHAE3.200e-3055.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KXJ0_9PHAE2.790e-2446.08RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L1K5_9PHAE5.440e-2446.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPT7_9PHAE1.550e-2347.06RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5K764_9PHAE1.750e-2348.04RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.370coord: 1..84
e-value: 2.5E-22
score: 81.1
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 7..102
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 7..102
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..85
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 3..78
e-value: 9.6E-19
score: 67.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig556contigH-paniculata_contig556:4..315 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig556.13062.1mRNA_H-paniculata_contig556.13062.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig556 4..315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig556.13062.1 ID=prot_H-paniculata_contig556.13062.1|Name=mRNA_H-paniculata_contig556.13062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
NTLRPLVYISRTTDNNEKNWDVTDLECAALVWAIKKLRVFLYGIKFDAFT
DHQPLLNYISLSEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLP
VPAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH