prot_H-paniculata_contig5553.13053.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5553.13053.1
Unique Nameprot_H-paniculata_contig5553.13053.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: UPI0006A6DEFC (uncharacterized protein LOC106336398 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6DEFC)

HSP 1 Score: 138 bits (347), Expect = 4.400e-34
Identity = 72/199 (36.18%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    6 KVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHF------PGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKAHKL 198
            K + DG VE++K R V +G+ Q+EG+ Y   +SP     ++R+LLA AA ++  + H D   AFL  D+D+E+Y+++P+ +E        P +V +L+K++YGL Q    WN +    +T  GFKQ+ +   +  K VD+   + V+V+VDDIL+   D    E F T L+  FKL+DL  A++++G  + RN+    L
Sbjct:  751 KYNPDGTVERHKSRVVAKGYTQLEGLDYLDTFSPVAKIGTLRLLLAVAAAKQWSITHLDVSNAFLNGDLDEEIYMKLPQGYEELTGKKVPPNSVCRLHKSLYGLKQASHQWNHKLSHVITGDGFKQTHSDHSLFVKYVDK-VYLVVLVYVDDILIVGNDDDAVERFKTVLKSAFKLRDLGPAKYFLGFEIARNQSGISL 948          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: UPI001ED945D8 (uncharacterized protein LOC124187843 n=2 Tax=Neodiprion TaxID=270857 RepID=UPI001ED945D8)

HSP 1 Score: 136 bits (342), Expect = 2.100e-33
Identity = 75/201 (37.31%), Postives = 119/201 (59.20%), Query Frame = 0
Query:    2 LYKRKVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKAHKLKLDQ 202
            ++K K    G V ++K R V +G  Q  G+ Y + ++P    +SIR L+A AA+ + E+   DA  AFL+ D+ +EVY+  P+ F +    V +L KAIYGL Q  R WNI+   ++   G +QSK  PC+  K +DE+  + + V+VDD+L+   D  T E    +L+  FK+K++ +A   +G  +TR+R+A K+ LDQ
Sbjct:  847 VFKTKTDDKGNVLRHKARLVIKGCAQKRGIDYEETFAPVVRYSSIRYLMALAAKHDLEMEQMDAVTAFLQGDLHEEVYMVPPKEF-YTGDKVWRLKKAIYGLKQASRQWNIKLDTELKKAGLQQSKVDPCIYHKTLDEKM-LFLAVYVDDLLIFTNDQVTKENLKNKLKKCFKMKEMGEAHHCVGLRITRDRQAGKIYLDQ 1045          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: A0A177T2I3_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T2I3_9BASI)

HSP 1 Score: 135 bits (339), Expect = 5.270e-33
Identity = 76/201 (37.81%), Postives = 116/201 (57.71%), Query Frame = 0
Query:    2 LYKRKVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKAHKLKLDQ 202
            ++K K + DG V KYK RFV +G+ Q+EGV Y + ++P    A++R + A AA  + EL  FD + A+L   +  +VY+  PE  E  PG V +L KA+YGL Q GR WN+   + +T +GFKQSK    +   V  + + +A++V+VDD+++ A           QL  RFK KDL +A   +G  + R+R+   L + Q
Sbjct:  883 VFKIKRNPDGSVSKYKARFVARGYAQVEGVDYDETHAPTARMATVRAICAIAACDDLELSQFDYDTAYLNGPLHAKVYMHPPEGTESRPGKVWRLIKALYGLKQAGREWNLVLVELLTDLGFKQSKTDASLF--VRTDPSFVAIIVYVDDLIIAAAKGTDMGELKRQLAQRFKGKDLGEAHHLLGIEIRRDREKKILTMSQ 1081          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: A0A2A4JV98_HELVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JV98_HELVI)

HSP 1 Score: 128 bits (321), Expect = 9.310e-32
Identity = 70/201 (34.83%), Postives = 112/201 (55.72%), Query Frame = 0
Query:    2 LYKRKVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKAHKLKLDQ 202
            ++K K + +G+V +YK R V +GF Q +G+ Y + ++P     SIR L A A +    +   DA  AFL+ DID E+Y+  P S+EH    V KLNK+IYGL Q  R WN++    +  IG K S   PC+  K  D    + ++++VDD+L+   +    E    QL+ +F +K L     ++G  + +N K  ++++DQ
Sbjct:  197 VFKMKTNANGEVVRYKARLVIKGFAQKKGIEYNEVFAPVVRHTSIRYLFALAVKYNLYVEQMDAVTAFLQGDIDTEIYMNQPPSYEHGQ-EVCKLNKSIYGLKQASRQWNLKLTSVLKNIGLKSSSVDPCVYYKKEDGSI-VYILIYVDDLLIFYNNKEKGEEIKQQLKSKFNMKSLGPVNHFIGWRIKQNAKRDQIQIDQ 395          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: A0A7N2LEN0_QUELO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LEN0_QUELO)

HSP 1 Score: 124 bits (311), Expect = 1.110e-31
Identity = 72/183 (39.34%), Postives = 101/183 (55.19%), Query Frame = 0
Query:   14 EKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKA-YPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKA 195
            E+YK R   +GF Q EGV Y + + P     S++VLLA  A +   L   D   AFL  D+D+EVY+ +P+ F      V KLNK++YGL Q  R W  +F   +  +GF QSKA Y    R+  D    M ++V+VDD+L+   D A  + F   L  RFKLKDL   ++++G  V R+ K 
Sbjct:    9 ERYKARLFAKGFTQKEGVDYFETFFPVAKMVSVKVLLAMVAIKGWFLSQLDVNNAFLHGDLDEEVYMALPQGFHSQGEVVCKLNKSLYGLKQAYRQWFAKFSGTLLQLGFTQSKADYSLFTRRQGD--VFMMLLVYVDDVLIACNDKAEIDRFKVLLDDRFKLKDLSDLKYFLGLEVARSAKG 189          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: A0A177TKF2_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TKF2_9BASI)

HSP 1 Score: 130 bits (327), Expect = 2.140e-31
Identity = 73/197 (37.06%), Postives = 113/197 (57.36%), Query Frame = 0
Query:    6 KVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKAHKLKLDQ 202
            K + DG + KYK R+V +G+ QIEG+ + + ++P    AS+R++ A AA  + EL  +D   A+L  ++ + VYI+ PE  +   G   KL KA+YGL Q GR WNI   + +T +GF+QSK    +   V  E + + +VV+VDD+++ A      +   +QL  RFK KDL  A   +G  + RNR+   L + Q
Sbjct:  923 KYNADGTISKYKARWVARGYSQIEGIDFDETHAPTARMASVRMVGALAAVDDLELIQWDYTTAYLNGELHNAVYIQPPEGVDVPAGKTWKLVKALYGLRQAGREWNIVLVEQLTDMGFRQSKTDASLF--VRTEPSFVIIVVYVDDLIIAASKDTDLKKLKSQLAARFKGKDLGDAHHLLGIEIKRNREKRTLTMSQ 1117          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: A0A1R3FUP1_COCAP (Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3FUP1_COCAP)

HSP 1 Score: 127 bits (320), Expect = 5.240e-31
Identity = 70/195 (35.90%), Postives = 111/195 (56.92%), Query Frame = 0
Query:    2 LYKRKVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESF----EHFPGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRN 192
            +YK K + DG VE+YK R V +G+ QIEGV + + ++P     +I+ LLA A+ R  EL   D   AFL  D+++EVY++IP+ F    EH    V +L K++YGL Q  R W  +F   +   GF QS +   +       E+ +AV+++VDD++V   D     W    L  +F++KDL + ++++G  V R+
Sbjct:  293 IYKVKFNPDGTVERYKARLVAKGYTQIEGVDFHETFAPVAKLVTIQCLLAVASVRNWELHQLDVNNAFLHGDLEEEVYMKIPQDFAKQGEH---RVCRLQKSLYGLKQASRNWYQKFTQALLTAGFIQSTSDHSLFTST-QGESYIAVLIYVDDVIVTGNDSTKIAWLKEYLNTKFQIKDLGQLKYFLGLEVARS 483          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: A0A250X7J3_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X7J3_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 7.110e-31
Identity = 70/199 (35.18%), Postives = 114/199 (57.29%), Query Frame = 0
Query:    6 KVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGA-VGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKAHKLKLDQH 203
            K  + G V ++K R V QG  Q +G    + ++P     S+R LL+ AA++E  L   D + +FL A++D++VYI++P   E      V +L KA+YGL Q  R W  +  D +  +GFKQS+A P +  + ++ + E+ ++ HVDD+L+ A D    +W   QL+G   +KD+  A +Y+G  ++  RK  K+ L QH
Sbjct:   29 KKDESGNVLQHKARLVIQGNMQKQGSEQLEVWAPTSKQPSLRFLLSIAAQQEMHLHQMDVKSSFLNAELDEDVYIQLPPELETGGDRQVYQLQKAVYGLKQAPRAWYNKLKDLLAGLGFKQSEADPAVYFQFMNGQLEI-ILTHVDDLLIAAADLNRVQWIKEQLKGLVDIKDMGPASYYLGMEIS--RKDGKILLTQH 224          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: O04543_ARATH (F20P5.25 protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=O04543_ARATH)

HSP 1 Score: 128 bits (322), Expect = 9.950e-31
Identity = 66/201 (32.84%), Postives = 116/201 (57.71%), Query Frame = 0
Query:    2 LYKRKVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHF------PGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKA-YPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKA 195
            ++K K + DG VE+YK R V QG+ Q EG+ Y + +SP     S+++LL  AA  +  L   D   AFL  D+D+E+Y+ +P+ +         P AV +L K++YGL Q  R W ++F   +  +GF QS   + C L+  + +   + V+V++DDI++ + + A  +   +Q++  FKL+DL + ++++G  + R+ K 
Sbjct:  847 IFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLK--ISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKG 1045          
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Match: A0A1A8L0C2_9TELE (CCHC-type zinc finger, nucleic acid binding protein a (Fragment) n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8L0C2_9TELE)

HSP 1 Score: 127 bits (318), Expect = 3.340e-30
Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = 0
Query:    2 LYKRKVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLLATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGAVGKLNKAIYGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVDDILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRN 192
            +Y  K   +G+ ++YK RFV QGF Q  G+ Y + +SP     SIRVLL  AA+    L   D + A+L A ID E+Y++ P+ +E   G V KL K++YGL Q GR WN    D++T   FKQ+ A  C+  K   E+ ++ +++ VDD+++ A +    E     L  RFK+KDL + E ++G   T++
Sbjct:  656 VYSVKSDSEGQ-DRYKARFVAQGFSQKMGIDYGETFSPTANLTSIRVLLQKAAQENLLLNQMDVKTAYLHAPIDYEIYVDQPKGYEEGKGLVCKLKKSLYGLKQSGRNWNKILHDNLTVNNFKQNPADHCVYTKET-EQGKIVLIIWVDDLIIAASNEKDMEGVKNMLSTRFKMKDLGRLEHFLGIDFTQS 844          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5553.13053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0006A6DEFC4.400e-3436.18uncharacterized protein LOC106336398 n=1 Tax=Brass... [more]
UPI001ED945D82.100e-3337.31uncharacterized protein LOC124187843 n=2 Tax=Neodi... [more]
A0A177T2I3_9BASI5.270e-3337.81Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]
A0A2A4JV98_HELVI9.310e-3234.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7N2LEN0_QUELO1.110e-3139.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177TKF2_9BASI2.140e-3137.06Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]
A0A1R3FUP1_COCAP5.240e-3135.90Reverse transcriptase, RNA-dependent DNA polymeras... [more]
A0A250X7J3_9CHLO7.110e-3135.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
O04543_ARATH9.950e-3132.84F20P5.25 protein n=1 Tax=Arabidopsis thaliana TaxI... [more]
A0A1A8L0C2_9TELE3.340e-3037.70CCHC-type zinc finger, nucleic acid binding protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..202
e-value: 1.5E-42
score: 145.9
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 3..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5553contigH-paniculata_contig5553:3658..4272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5553.13053.1mRNA_H-paniculata_contig5553.13053.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5553 3439..4275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5553.13053.1 ID=prot_H-paniculata_contig5553.13053.1|Name=mRNA_H-paniculata_contig5553.13053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MLYKRKVSKDGKVEKYKCRFVTQGFRQIEGVHYTKKYSPPPATASIRVLL
ATAAEREGELRHFDAEQAFLKADIDDEVYIEIPESFEHFPGAVGKLNKAI
YGLIQVGRCWNIQFCDDMTPIGFKQSKAYPCMLRKVVDEEAEMAVVVHVD
DILVHAKDCATTEWFATQLRGRFKLKDLPKAEFYMGCHVTRNRKAHKLKL
DQHM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2