prot_H-paniculata_contig5553.13052.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5553.13052.1
Unique Nameprot_H-paniculata_contig5553.13052.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
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BLAST of mRNA_H-paniculata_contig5553.13052.1 vs. uniprot
Match: A0A6H5JUI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI4_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 4.470e-5
Identity = 26/70 (37.14%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:    9 TRLQSDKSLNSLGNLNAAQERMSKKRRRKGFDTTRREWLQSTILTDREKRCITKSWQKREARVKKRFNEK 78
            ++  + KS NSLG LNA +ER  K++R  G D TR  +   + L+ RE+R + + W KRE ++++ F+++
Sbjct:  115 SQFHTGKSRNSLGKLNAVEERNFKRQRLAGSDATRAGFTLESTLSRRERRSVARGWSKREGKLRRDFDKR 184
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BLAST of mRNA_H-paniculata_contig5553.13052.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 6.170e-5
Identity = 26/64 (40.62%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:   15 KSLNSLGNLNAAQERMSKKRRRKGFDTTRREWLQSTILTDREKRCITKSWQKREARVKKRFNEK 78
            KS NSLG LNA +ER  K++R  G D TR  +   + L+ RE+R + + W KRE ++++ F+++
Sbjct:  111 KSRNSLGKLNAVEERNFKRQRLAGSDATRAGFTLESTLSRRERRSVARGWSKREGKLRRDFDKR 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5553.13052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUI4_9PHAE4.470e-537.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7P7_9PHAE6.170e-540.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5553contigH-paniculata_contig5553:1419..1912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5553.13052.1mRNA_H-paniculata_contig5553.13052.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5553 1419..1913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5553.13052.1 ID=prot_H-paniculata_contig5553.13052.1|Name=mRNA_H-paniculata_contig5553.13052.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
SGPAAAASTRLQSDKSLNSLGNLNAAQERMSKKRRRKGFDTTRREWLQST
ILTDREKRCITKSWQKREARVKKRFNEKADPSSPRT
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