prot_H-paniculata_contig555.13048.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig555.13048.1
Unique Nameprot_H-paniculata_contig555.13048.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
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BLAST of mRNA_H-paniculata_contig555.13048.1 vs. uniprot
Match: D7G6Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.560e-14
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:    5 VGGRHYKNEEFDEAADYYSMALEYCPEDEDHKQDRAVCLGNRAACHLQLKEVQ 57
             G  HYKN EF++A DYY+MAL YCPEDE HK+DRAV L NRA  HL+L+E +
Sbjct:  234 AGNEHYKNGEFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYE 286
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BLAST of mRNA_H-paniculata_contig555.13048.1 vs. uniprot
Match: A0A835YHX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.110e-8
Identity = 24/52 (46.15%), Postives = 40/52 (76.92%), Query Frame = 0 
Query:    6 GGRHYKNEEFDEAADYYSMALEYCPEDEDHKQDRAVCLGNRAACHLQLKEVQ 57
            G  +Y  +++ +AAD Y++ALE+CP+DE  ++++AV   NRAACHL+L++ Q
Sbjct:   15 GNTYYLAKQYLDAADCYTLALEFCPDDEGERENKAVYFSNRAACHLRLEDFQ 66
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig555.13048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6Y9_ECTSI1.560e-1464.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHX5_9STRA1.110e-846.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..60
e-value: 1.5E-12
score: 49.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..56
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..32
score: 9.53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig555contigH-paniculata_contig555:385..567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig555.13048.1mRNA_H-paniculata_contig555.13048.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig555 385..567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig555.13048.1 ID=prot_H-paniculata_contig555.13048.1|Name=mRNA_H-paniculata_contig555.13048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
TCFSVGGRHYKNEEFDEAADYYSMALEYCPEDEDHKQDRAVCLGNRAACH
LQLKEVQYTYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom