mRNA_H-paniculata_contig5549.13046.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5549.13046.1
Unique NamemRNA_H-paniculata_contig5549.13046.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: D7FZA4_ECTSI (Adenylyl-sulfate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZA4_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 3.580e-92
Identity = 142/194 (73.20%), Postives = 158/194 (81.44%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGS--PYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYLC--PPTTDVDG 743
            RW LKGQ GVV+WLTGLSGSGKSTVANALD KLT+ GRHTYILDGDNVRHGLN+GL FS EDR+ENVRRV EVARLMVDLG+IVLVPVISP+R+DR+R R RF  GEFVEV+VSTSL+ CE+RDPK LYKKAR+GEI NMTGI +  PYEAP  PE+ L A GCSV    + LL YLR+ GYL   PPT    G
Sbjct:   29 RWELKGQRGVVLWLTGLSGSGKSTVANALDVKLTAEGRHTYILDGDNVRHGLNSGLGFSPEDRRENVRRVAEVARLMVDLGIIVLVPVISPYRQDRERARGRFNSGEFVEVHVSTSLQTCEQRDPKDLYKKARAGEITNMTGIAADAPYEAPENPEIQLLAEGCSVEACVDNLLSYLRERGYLNVQPPTAGSSG 222
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: A0A836VT28_9PLAN (Adenylyl-sulfate kinase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836VT28_9PLAN)

HSP 1 Score: 241 bits (615), Expect = 2.650e-76
Identity = 109/181 (60.22%), Postives = 138/181 (76.24%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYL 716
            RW L G  G V+W TGLS SGKST+AN +D KL + G+HT++LDGDN+RHGLN  L FSAEDR+EN+RR+GEVA+L  D G++ L   ISP+R DRD+VR     GEFVE++V TSLE CE+RDPKGLYKKAR+GEIK  TGI  PYE PL PE+VLD     ++E +++++ YL +HGYL
Sbjct:   21 RWQLMGHRGAVLWFTGLSASGKSTIANTVDHKLHAMGKHTFVLDGDNIRHGLNKNLGFSAEDREENIRRIGEVAKLFCDAGILTLTAFISPYRADRDKVRKLLEPGEFVEIFVDTSLETCEQRDPKGLYKKARAGEIKGFTGIDDPYEPPLNPEIVLDGDTKGIDELADQVVTYLDEHGYL 201
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: A0A3M1VBW0_9BACT (Adenylyl-sulfate kinase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1VBW0_9BACT)

HSP 1 Score: 241 bits (615), Expect = 3.950e-76
Identity = 112/184 (60.87%), Postives = 138/184 (75.00%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYLCPP 725
            R  LKG  GVV+W TGLSG GKST+AN +D KL + G+HTY+LDGDN+RHGLN  L FS EDRKEN+RR+GEVA+L  D G+I +   ISP+REDRD VR     G+F+E+YV  SLE CE RDPKGLYKKAR+GEIK  TGI +PYE PL PE+VLD+    V+E +++++ YL  HGYL  P
Sbjct:   21 RCRLKGHRGVVLWFTGLSGCGKSTIANTVDHKLHAMGKHTYVLDGDNIRHGLNKNLGFSPEDRKENIRRIGEVAKLFCDAGLITMTAFISPYREDRDAVRKLLKDGQFIEIYVKASLETCESRDPKGLYKKARAGEIKGFTGIDAPYEPPLNPEIVLDSDNLGVDELADQVIAYLDRHGYLNLP 204
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: W4QN63_ALKA3 (Adenylyl-sulfate kinase n=2 Tax=Alkalihalobacillus TaxID=2675234 RepID=W4QN63_ALKA3)

HSP 1 Score: 233 bits (593), Expect = 4.780e-73
Identity = 110/176 (62.50%), Postives = 137/176 (77.84%), Query Frame = 3 
Query:  189 GQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYL 716
            G   V++W TGLSG+GKST+ANAL+ +L ++G+H+Y+LDGDNVRHGLN GL FS EDRKEN+RR+GEVA+L VD G IV    ISPF+EDR+RVR     GEF+EVYV  SLEACE+RDPKGLYKKAR+GEI   TGI SPYE P APEL++D+   +V ES E ++ YL++   L
Sbjct:   23 GHSSVILWFTGLSGAGKSTLANALEQQLFNSGKHSYVLDGDNVRHGLNKGLGFSDEDRKENIRRIGEVAKLFVDAGTIVCTAFISPFKEDRNRVRELVEDGEFIEVYVRCSLEACEQRDPKGLYKKARAGEIPEFTGISSPYEEPDAPELIIDSDKQTVEESVETIIAYLKERKIL 198
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: A0A2U1JXK7_9BACI (Adenylyl-sulfate kinase n=1 Tax=Pueribacillus theae TaxID=2171751 RepID=A0A2U1JXK7_9BACI)

HSP 1 Score: 232 bits (591), Expect = 9.910e-73
Identity = 110/183 (60.11%), Postives = 139/183 (75.96%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYLCP 722
            R  L G    V+WLTGLSGSGKST+ANA+D KL  +   +Y+LDGDN+RHGLN GL FS EDRKEN+RR+GEVA+L VD G IVL   ISPF+EDR+RVR+ F K EF+EVYV  +L+ CE RDPKGLYKKAR+GEI + TGI SPYEAP  PEL ++    S++E+S+ +++YL+  G + P
Sbjct:   17 RVRLNGHRSAVLWLTGLSGSGKSTLANAIDLKLHESLVRSYVLDGDNIRHGLNKGLGFSEEDRKENIRRIGEVAKLFVDSGQIVLTAFISPFQEDRNRVRALFRKDEFIEVYVKCALDVCETRDPKGLYKKARNGEIPDFTGISSPYEAPAEPELTIETDRLSIDEASDIVMQYLKTEGIIAP 199
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: A0A1X9MG70_9BACI (Adenylyl-sulfate kinase n=3 Tax=Alkalihalobacillus TaxID=2675234 RepID=A0A1X9MG70_9BACI)

HSP 1 Score: 231 bits (590), Expect = 1.310e-72
Identity = 110/176 (62.50%), Postives = 136/176 (77.27%), Query Frame = 3 
Query:  189 GQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYL 716
            G    ++W TGLSG+GKST+ANAL+ +L   G+++Y+LDGDNVRHGLN GL FS EDRKEN+RR+GEVA+L VD G IV    ISPF+EDRDRVR     GEF+EVYV  SLEACE+RDPKGLYKKAR+GEI   TGI SPYE P APE+++D+   +V ES E +L YL+++G L
Sbjct:   22 GHRSAILWFTGLSGAGKSTLANALEQQLFKQGKNSYVLDGDNVRHGLNKGLGFSDEDRKENIRRIGEVAKLFVDAGTIVCTAFISPFKEDRDRVRELVEDGEFIEVYVRCSLEACEQRDPKGLYKKARAGEIPEFTGISSPYEEPNAPEIIVDSDKQTVEESVEVVLAYLKENGIL 197
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: A0A517Z6Q1_9PLAN (Adenylyl-sulfate kinase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z6Q1_9PLAN)

HSP 1 Score: 231 bits (589), Expect = 2.270e-72
Identity = 108/181 (59.67%), Postives = 135/181 (74.59%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYL 716
            R  LKG  G V+W TGLSG+GKST+AN +D KL + G+HTY+LDGDN+RHGLN  L FSAEDR EN+RR+GEVA+L  D GVI L   ISP+R DRD VR+   +GEFVE+YV  SLE CE+RDPKGLYKKAR+GEIK  TGI  PYE P   EL+LD+ G  ++E ++ ++ +L   G+L
Sbjct:   21 RKRLKGHKGCVLWFTGLSGAGKSTIANTVDHKLHALGKHTYLLDGDNIRHGLNKNLGFSAEDRAENIRRIGEVAKLFADCGVITLTAFISPYRVDRDNVRALLPEGEFVEIYVKASLETCEDRDPKGLYKKARAGEIKGFTGIDDPYEEPENAELILDSDGKGIDELADEVVAHLNQKGFL 201
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: A0A518CNU2_9PLAN (Adenylyl-sulfate kinase n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CNU2_9PLAN)

HSP 1 Score: 231 bits (588), Expect = 3.210e-72
Identity = 111/181 (61.33%), Postives = 133/181 (73.48%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYL 716
            R  L G  GV++W TGLSG+GKSTVAN +D  L S G H+Y+LDGDN+R GLN  L FSAEDR EN+RR+GEV +L V  GVI     ISP+REDRD+VR   G+GEF+EVYV+ SL  CEERDPKGLYKKAR+GEIKN TGI  PYEAP   ELVLD+    ++E +E ++ YL   GYL
Sbjct:   21 RCELNGHKGVMLWFTGLSGAGKSTVANTVDHLLHSKGNHSYVLDGDNIRMGLNKNLGFSAEDRAENIRRIGEVGKLFVGAGVITSTAFISPYREDRDKVRELMGEGEFIEVYVNASLATCEERDPKGLYKKARAGEIKNFTGIDDPYEAPENAELVLDSDSKGIDELAEEVVAYLESKGYL 201
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: A0A534QCX7_9DELT (Adenylyl-sulfate kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534QCX7_9DELT)

HSP 1 Score: 231 bits (588), Expect = 3.320e-72
Identity = 113/181 (62.43%), Postives = 131/181 (72.38%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYL 716
            R  L GQ GV VWLTGLSGSGKST+A   +  L   GRH Y+LDGDN+RHGLN  L FS  DR EN+RR+GEVA+L  D GVIV+   ISP+REDRD VR+  GKG+FVEVYV  S+E CE RD KGLYKKAR+GEI   TGI +PYEAP  PELVLD    SV++S   L++YL   GYL
Sbjct:   21 REQLLGQRGVTVWLTGLSGSGKSTIAVGAEKALLERGRHAYVLDGDNIRHGLNKNLGFSPTDRTENIRRIGEVAKLFTDAGVIVMTSFISPYREDRDAVRAIMGKGDFVEVYVQASVETCESRDVKGLYKKARAGEIPEFTGISAPYEAPARPELVLDTQAQSVDQSVAALVDYLDAQGYL 201
[Close]
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Match: UPI000DD3543F (adenylyl-sulfate kinase n=1 Tax=Paraliobacillus TaxID=200903 RepID=UPI000DD3543F)

HSP 1 Score: 230 bits (587), Expect = 4.400e-72
Identity = 111/181 (61.33%), Postives = 137/181 (75.69%), Query Frame = 3 
Query:  174 RWALKGQMGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLTFSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGEFVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVLDASGCSVNESSERLLEYLRDHGYL 716
            R +LK Q   V+W TGLSGSGKSTV+  L+ KL   G HTY LDGDN+RHGLN  L FSA+DRKEN+RR+GEV++LMVD G++ L   ISP+REDRD VRS     EFVE+YV  SLE+CEERDPKGLYKKAR+GEIK  TGI  PYE PL PE++++    SV+ES +++++YL   GYL
Sbjct:   19 RQSLKKQKSAVLWFTGLSGSGKSTVSVDLEKKLFEHGVHTYRLDGDNIRHGLNNNLGFSAQDRKENIRRIGEVSKLMVDAGLLTLSAFISPYREDRDHVRSLLASEEFVEIYVKCSLESCEERDPKGLYKKARAGEIKGFTGIDDPYEEPLNPEVIIETDKQSVDESVKKIIDYLNRKGYL 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5549.13046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZA4_ECTSI3.580e-9273.20Adenylyl-sulfate kinase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836VT28_9PLAN2.650e-7660.22Adenylyl-sulfate kinase n=1 Tax=Planctomycetaceae ... [more]
A0A3M1VBW0_9BACT3.950e-7660.87Adenylyl-sulfate kinase n=1 Tax=Planctomycetes bac... [more]
W4QN63_ALKA34.780e-7362.50Adenylyl-sulfate kinase n=2 Tax=Alkalihalobacillus... [more]
A0A2U1JXK7_9BACI9.910e-7360.11Adenylyl-sulfate kinase n=1 Tax=Pueribacillus thea... [more]
A0A1X9MG70_9BACI1.310e-7262.50Adenylyl-sulfate kinase n=3 Tax=Alkalihalobacillus... [more]
A0A517Z6Q1_9PLAN2.270e-7259.67Adenylyl-sulfate kinase n=1 Tax=Maioricimonas rari... [more]
A0A518CNU2_9PLAN3.210e-7261.33Adenylyl-sulfate kinase n=1 Tax=Polystyrenella lon... [more]
A0A534QCX7_9DELT3.320e-7262.43Adenylyl-sulfate kinase n=1 Tax=Deltaproteobacteri... [more]
UPI000DD3543F4.400e-7261.33adenylyl-sulfate kinase n=1 Tax=Paraliobacillus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5549contigH-paniculata_contig5549:8287..13740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score267.3
Seed ortholog evalue5.5e-69
Seed eggNOG ortholog2880.D7FZA4
Preferred nameMET14
KEGG rclassRC00002,RC00078
KEGG koko:K00860
KEGG ReactionR00509,R04928
KEGG Pathwayko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120
KEGG ModuleM00176
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019379,GO:0019419,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0055114,GO:0071704,GO:1901564
EggNOG free text desc.adenylylsulfate kinase activity
EggNOG OGsCOG0529@1,KOG0635@2759
Ec32 ortholog descriptionAdenylylsulfate kinase
Ec32 orthologEc-19_000180.1
EC2.7.1.25
COG Functional cat.F
BiGG ReactioniMM904.YKL001C,iND750.YKL001C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons7
Model size958
Cds size579
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930583.5286922-UTR-H-paniculata_contig5549:8286..84711622930583.5286922-UTR-H-paniculata_contig5549:8286..8471Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 8287..8471 -
1691481358.798679-UTR-H-paniculata_contig5549:8286..84711691481358.798679-UTR-H-paniculata_contig5549:8286..8471Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 8287..8471 -
1622930583.646885-UTR-H-paniculata_contig5549:12580..126021622930583.646885-UTR-H-paniculata_contig5549:12580..12602Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 12581..12602 -
1691481358.8905623-UTR-H-paniculata_contig5549:12580..126021691481358.8905623-UTR-H-paniculata_contig5549:12580..12602Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 12581..12602 -
1622930583.6602597-UTR-H-paniculata_contig5549:12828..128671622930583.6602597-UTR-H-paniculata_contig5549:12828..12867Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 12829..12867 -
1691481358.8999171-UTR-H-paniculata_contig5549:12828..128671691481358.8999171-UTR-H-paniculata_contig5549:12828..12867Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 12829..12867 -
1622930583.6750166-UTR-H-paniculata_contig5549:13607..137401622930583.6750166-UTR-H-paniculata_contig5549:13607..13740Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 13608..13740 -
1691481358.908759-UTR-H-paniculata_contig5549:13607..137401691481358.908759-UTR-H-paniculata_contig5549:13607..13740Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5549 13608..13740 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930583.552384-CDS-H-paniculata_contig5549:8471..86781622930583.552384-CDS-H-paniculata_contig5549:8471..8678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 8472..8678 -
1691481358.810955-CDS-H-paniculata_contig5549:8471..86781691481358.810955-CDS-H-paniculata_contig5549:8471..8678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 8472..8678 -
1622930583.5740855-CDS-H-paniculata_contig5549:9414..95021622930583.5740855-CDS-H-paniculata_contig5549:9414..9502Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 9415..9502 -
1691481358.8262825-CDS-H-paniculata_contig5549:9414..95021691481358.8262825-CDS-H-paniculata_contig5549:9414..9502Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 9415..9502 -
1622930583.5901074-CDS-H-paniculata_contig5549:10109..101451622930583.5901074-CDS-H-paniculata_contig5549:10109..10145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 10110..10145 -
1691481358.845758-CDS-H-paniculata_contig5549:10109..101451691481358.845758-CDS-H-paniculata_contig5549:10109..10145Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 10110..10145 -
1622930583.6191154-CDS-H-paniculata_contig5549:11028..112311622930583.6191154-CDS-H-paniculata_contig5549:11028..11231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 11029..11231 -
1691481358.858083-CDS-H-paniculata_contig5549:11028..112311691481358.858083-CDS-H-paniculata_contig5549:11028..11231Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 11029..11231 -
1622930583.6339583-CDS-H-paniculata_contig5549:12535..125801622930583.6339583-CDS-H-paniculata_contig5549:12535..12580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 12536..12580 -
1691481358.8713708-CDS-H-paniculata_contig5549:12535..125801691481358.8713708-CDS-H-paniculata_contig5549:12535..12580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5549 12536..12580 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5549.13046.1prot_H-paniculata_contig5549.13046.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5549 8472..12580 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5549.13046.1

>prot_H-paniculata_contig5549.13046.1 ID=prot_H-paniculata_contig5549.13046.1|Name=mRNA_H-paniculata_contig5549.13046.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MGVVVWLTGLSGSGKSTVANALDAKLTSAGRHTYILDGDNVRHGLNAGLT
FSAEDRKENVRRVGEVARLMVDLGVIVLVPVISPFREDRDRVRSRFGKGE
FVEVYVSTSLEACEERDPKGLYKKARSGEIKNMTGIGSPYEAPLAPELVL
DASGCSVNESSERLLEYLRDHGYLCPPTTDVDGVVVADAKAT*
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mRNA from alignment at H-paniculata_contig5549:8287..13740-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5549.13046.1 ID=mRNA_H-paniculata_contig5549.13046.1|Name=mRNA_H-paniculata_contig5549.13046.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5454bp|location=Sequence derived from alignment at H-paniculata_contig5549:8287..13740- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTCCATGGAGGCCGGCGCTATTGTCAAAGGTTGGTATCTGCTGGGCCA
GGAGTGCCATACGCGAAGAAGTGGCTGCTCCCCATTCACTCACTCTGTGC
TCTCACCGCTGCTACTACATGTGCTATGTCCAGGTGAAAAAAGTAATTTG
ATTGATCTTGGTTTGCGTAAGATGTTCGAGCCTGATAAAAAAAACATGCA
TACATATATGATACGTGACAACACCCACACGTAGCAGTTACAAGACAATC
AGTAATACACTTGACGCAGGATGAAGAACTCTATCACCAACTACTACAGA
GTGATCATCACCACACGGGCCAATTGCCAAGGACAGCTTCATCAGCAGGA
CGGTATCTGTACTATGAGAGTGCGGTTTGTAAAAGACCCATAAAAGTTAC
AGAGTGAGTCAAAAGTATCAGCAGATATCATAAGCATAAATTATTTTTTG
TATCTGTTTAAATCATGACAATAACCGTACAAAGAAATGGAGGTATGCTC
AGCAGCTTAAAGCTACTGGCTTACTTGGTTATTATCCACAAACTGAACCG
ACTAGGAGGGGTTATGGGTAAAAGCACCTGCAGCTGATCCTCAGTTCCAA
AGCTCAGAGTTTATTTGGAGCAACTCCTGTTAACTGCTGGGACAGCGCTG
GCTATATGAGGTACAAGCTTCAAAATGTCAAAACACGATTTTTGGCGCTC
TCTGTCATATTCCAGGCTAGCGTATGACAACAACCGTCCCAAGAAACTCA
CAAAATAGCAGGAGTTACGCCGCACAATCTTCAATCCCAGCTATGTTTCG
GGACAGAGTGGTATCAAATACTGGATCAGTCGGTAAAATTCAAATGAAAA
CAAGATTCGAGGTTTCATAACAGGTCAAGGTGGAAGACGCAATGATCGTG
ACCCATAACCTGGCCATTCACCAACAGGGAGATTTACCCACGTACGATAT
GTATACCCGTCTAGCCGACAACGTGATGGCTGACGTAGATATCAACTTGG
TTATTCCGAAACAGAAGATTGTATGAGCCGTTGTTACCTTGAAGGGAATT
CCCGCTTTTGCGCTCAAGTCTAATCGCCCGCTCAATCTCTGTTACATGGG
CCTCTTCTTTTTATATGCTGTCACCTACCACTGGCGAGCAGGTGGGCTTT
GAAGGGGCAAATGGGGGTAGTTGTTTGGCTCACCGGGCTCAGCGGGTCGG
GGAAGGTGAGCCCCGTTCATTACCGACTCACCACTAGATAATAATACTAC
CATTATACTGATTGATTTCAGGCTTTCCTTCATATCGAGGACCGTTGCTA
TTCATTTAGAACGAGATGAAGAGCTCCCTGCATATCCAATAATCAGTGTT
AACGCCTATTGCACCTGGTTACGTTTTGGCGAATGACTGAGAAATATGCT
TTCTGATAACGACAAAAGGAAAAATACATGACAGACTAATAATAATCCTC
ATGGTGTACGTTAATTCATATCATTTTTGAACTGCTGTGTTTTCTAGGGG
GACATTCTTTTGGTCTAGTTTTTTGTGGGCGCAACAGACTTGTAGTATCG
ACAGCGAGTAAGAGAGAGATGACAGCACCCAGTACCCTACCACCGTGGCT
ACGGTCAATGTTCTCATCAACAAGTAATGACATATGCGTAGCAATAATTG
TGTGACAAATCTTGCTGTCTGCACTGTCTGCACTGTCTGCGTGTCGGAAC
AGTGCCGTGAGAGCCCTGGTGGTGTTTATGATTACGTGTCCTGGTATGCG
GCTTTCTGTGGCGTACACACCCTATACAGCCAGTCACTCATCATGTGGTT
TGTGCTTCATGTTTCAACCATGTGCCATTGTCGTGGAACTAAAAAATTGT
GCCAACTCCTGTAACTCCTGTCTTATGAGTGTCTGCAATATTTTTACCGG
GCCGTCTGTACTGTCTGTAGAGCTTTCCTTCCCTGTAATGATGTGGGCGA
TTATCAGGACTAAATTCCGAAGGGATATTGGCCTGTTTTTCTAGTAGGGA
TTGTGTAGGGATATACGCAGCAGGTTTTTCGGGGTTCGGCAAAGGGCATC
TGTTCCACAAAAGATGTATTGCGGTGTAGTAGTGGGAAATGCATGTGGTC
CGAGGCTTTTGCTACGTACTGACCTCATTGAGGGAGGATCGAAAGGCGCG
GAAAAAAGCAAGCAAAAGTGGGTACAGGGCGTTTCACAGAAGCTTACTTG
AATATCACGGACGTGCCACCGAAACCTGGACACAAATGCAAATAGCTCGA
GCCGTCATACAATAACTTGATACTAGTATCCTACGTACAGCGAAAAATGA
AAACAAGATTGCTCAGAGTAGCTTGGCCATATATCCTATACTTGAAATTT
TTTTATCACACTTGGTGTGCGCTGTGCTATGAAATGCTATGCTATGCAAT
TCTACCCTGTGTTGTCCTATCCTTACTGTATGGGCACTGCATGACTCAAC
ACTATGGACGTGACGCATTTTATGTTGGATTCGTTTCATATCCTCAAACA
CGAAAATAGAGCACGGTGGCGAACGCGCTCGATGCGAAGCTAACGTCCGC
GGGTCGCCACACGTACATCCTAGACGGAGACAATGTGCGGCACGGCCTTA
ACGCTGGGCTCACGTTTTCAGCGGAAGATCGGAAGGAAAACGTACGAAGG
GTCGGGGAGGTAGCGCGGTTGATGGTCGACCTCGGAGTGATTGTCCTCGT
GCCTGTCATTAGGTGGGTCGTTTGATATTCGTCTTGTGGTTCATAAGATG
GGATATTAAAAGGATGGCAGTGTCTTCGTTGGATTTGTGTTCATTATTTA
TGGTGGATGCTGCAGCTCCATTCGGTTTTGATATCGACATAGCTCGTATG
GGTTAATTATTCAAAAGTTCGTTCCGTTGCATTGGAAAGGTTTTTCCAGA
CAGGCAGTACGATCGGTTTTCGTTCTTTCCCCGTTTCGTATTTACGGTAG
TCCTACTTTGCCGTCATCGTGATCAATTAATTAGCCTGGTGTCGAAACGA
CGTGTGTTTCCTTCGATAGCTTTTTTTTTTTGTCTATCCACTGTGCGGTA
TTGATAGCATTCTGCGTTATGTGCAGAGGAGGTACTAAGGTTTGAAGCTT
TGGTCGTAAGAGATGGCGTGTTTTTGCTCTGTGTTTTCCTAATTTTCAGG
GATTATCCCGTTAGTCGTTTTTCGCCGTTGATTCCGAGTCGTCACCATTG
ATGAGCTGACATCTTGCCATTTGCACATCTTCATATCCACGTTTGTACTT
TGTCAGAAGAGAGCTATTGCCATAATACCCATATCCCTATACTTGTTGAA
AGTATACATGAATAGCTTGTAAACGATTTGAATGACGCATCGAAAACAGT
ACCAAAGACTTGCTTTGATTTGAAATGTTACACGAGTCCGCCTTTCAATT
GTGCAGCCATGCTTGCGTTTAGTTTTCCGTGGGGGTATTTCCAGCAGCGG
AAATTATGCCCCGCATTATGGCAGGAGCTAAGTTTCCGATATATTCGTCT
TTCCCCCTACTGTGTGTTGCATGCCCCGCGTCTACGTTTTTGCTGCGGAC
TGCACCCTCGGTTGCTACTACCATGATCCATGATTTCGTTGGCAGCCCTT
TTCGCGAAGACAGGGACAGAGTACGATCAAGGTATGACCATTGTCACAAA
CAGGTGGATTGTGTTTTGCCAAGTCTCTGTACCGGCGTTCAAACGCGTTT
CATGTTAATCTTGAAAGTCATACTGTATGTCCGAACCAAGAAAGAGCACG
CTGCGTTTCCCTGGCGTGGATAATGACCTTTGTCGTGAGGGTCGATTCCA
GTTGGTGTGCTTATTTTTTGTTCTCATTTCTTGGCGATCTTGTGTTGTTG
TAGTTCGATCGAAATCTTCGTCCCAAGTGGGGTGAGAGGAGGGCTTTTGC
TGTATTGGCCGAATTTAGCAACGACATCTGATTTGTCTTCGGCGAGGCCA
CCTGAAACCTGGTCCATCTCATCGCACGTGGCATCTATCGACCGCGTTTT
GCCCGGAGCTAGGGTTAGGGTTACCCTACGTAAACACCTGCCGTCCCAAT
CAGTGACCTCCTACGAAACCATCGAGGTCGTATCGGTGCACTCACGGGCA
ATTGGAGCATGCAACTTTTCTTTTGGTATTCTTTTTGATCATTCATACCG
TCGCATAGCGGATATTCCTCACAATGGATCTTATGGCATGTGCTAATGAC
GTACGTCTTTTGTGTGCGCTTGTCACTGGTCGTGCCAGGTTTGGAAAAGG
CGAGTTCGTTGAGGTGTACGTGTCGACGTCTCTCGAAGCATGCGAGGAAC
GAGATCCTAAGGGCTTATACAAAAAGGTATGGTGTATGCAGCGTAGTCCA
TTGCATGATATACGCGTACACATTTTCTGTTTTTCATGTCAAGATTTTGT
GTACTAATACACAGTAGGCAGGTCAGCATGCCAGTTACGCGCGATACATC
TGAAAACACTTGGATAGACAATACAAACAGTTCCGAGATGAACGTTACAA
TGTTAATAGGGATACGTGGAGGAGATTACCACTTTTTTTAGCTATTCCCC
AGGAAATAGAGCAGGGTAGATCCTTTTCTGGCACTGCACTTATATCATGT
AATGGAACGCTAGGTACGCCAGTTAATATATCATGTTTCCACCAATTTTT
ATGTGGTCATTCATACCAAGATTGGAAAACGTTTAAAGCGTAATGACTGA
CCTAACTATGGTATGGTCCAATTTTCACTCGCACTGTGATCTTATTCGCT
CATTCATTACCACAGCTAGCCCCTTCAACATACACCATTTTTTTCGCTCT
CTAGCATATTGACCTCCACAAGCAGCCGTGAGAGAGCGGGGGTAGGACAA
GTACAGATCGACCTCATCATGTCGCCTTGTGGGTTCCCCGAGTACTCTGC
CCTTGCGTATGGAATACCCACTACCCGGTACACTACAATTGCTGCCCTTT
TTGTGTCCCCGAAGTTAACTCTAGTTCGAATTCCCTGACAGACCCTGCTC
ACACTAGGCTTGTGACGTTGCCATGGCGTGATTTTGTGGCTTGTCGTGGT
GGTATTGAGCAGGCACGGTCGGGTGAGATCAAGAACATGACAGGAATCGG
ATCACCGTACGAAGCGCCTCTTGCCCCCGAGCTAGTGCTAGACGCCAGTG
GTTGCTCCGTAAATGAGTCATCGGAGAGGCTATTAGAATATTTGAGAGAT
CACGGCTACCTGTGCCCGCCTACGACCGATGTTGATGGTGTTGTAGTAGC
TGATGCTAAGGCAACGTAGCTCCATGTGGTACACAACATGGTGAACGCGC
AAGACCGGCTGTGGGTTGGAAACAAAGCTAGATCGCGGGTACCAACGCAC
CCTGGCCGAGCGGGATTGGGTTTATCCACCTATTTTACAACATTAGTATC
ATTTGCTTGGACTTCAAGAGGAACGGTGTCTCGCATAAATAGTTTTGGTC
CCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig5549:8287..13740-

>mRNA_H-paniculata_contig5549.13046.1 ID=mRNA_H-paniculata_contig5549.13046.1|Name=mRNA_H-paniculata_contig5549.13046.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1158bp|location=Sequence derived from alignment at H-paniculata_contig5549:8287..13740- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGTAGTTGTTTGGCTCACCGGGCTCAGCGGGTCGGGGAAGATGGG
GGTAGTTGTTTGGCTCACCGGGCTCAGCGGGTCGGGGAAGAGCACGGTGG
CGAACGCGCTCGATGCGAAGCTAACGTCCGCGGGTCGCCACACGTACATC
CTAGACGGAGACAATGTGCGGCACGGCCTTAACGCTGGGCTCACGTTTTC
AGCGGAAGATCGGAAGGAAAACGTACGAAGGGTCGGGGAGGTAGCGCGGT
TGATGGTCGACCTCGGAGTGATTGTCCTCGTGCCTGTCATTAGAGCACGG
TGGCGAACGCGCTCGATGCGAAGCTAACGTCCGCGGGTCGCCACACGTAC
ATCCTAGACGGAGACAATGTGCGGCACGGCCTTAACGCTGGGCTCACGTT
TTCAGCGGAAGATCGGAAGGAAAACGTACGAAGGGTCGGGGAGGTAGCGC
GGTTGATGGTCGACCTCGGAGTGATTGTCCTCGTGCCTGTCATTAGCCCT
TTTCGCGAAGACAGGGACAGAGTACGATCAAGCCCTTTTCGCGAAGACAG
GGACAGAGTACGATCAAGGTTTGGAAAAGGCGAGTTCGTTGAGGTGTACG
TGTCGACGTCTCTCGAAGCATGCGAGGAACGAGATCCTAAGGGCTTATAC
AAAAAGGTTTGGAAAAGGCGAGTTCGTTGAGGTGTACGTGTCGACGTCTC
TCGAAGCATGCGAGGAACGAGATCCTAAGGGCTTATACAAAAAGGCACGG
TCGGGTGAGATCAAGAACATGACAGGAATCGGATCACCGTACGAAGCGCC
TCTTGCCCCCGAGCTAGTGCTAGACGCCAGTGGTTGCTCCGTAAATGAGT
CATCGGAGAGGCTATTAGAATATTTGAGAGATCACGGCTACCTGTGCCCG
CCTACGACCGATGTTGATGGTGTTGTAGTAGCTGATGCTAAGGCAACGTA
GGCACGGTCGGGTGAGATCAAGAACATGACAGGAATCGGATCACCGTACG
AAGCGCCTCTTGCCCCCGAGCTAGTGCTAGACGCCAGTGGTTGCTCCGTA
AATGAGTCATCGGAGAGGCTATTAGAATATTTGAGAGATCACGGCTACCT
GTGCCCGCCTACGACCGATGTTGATGGTGTTGTAGTAGCTGATGCTAAGG
CAACGTAG
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