prot_H-paniculata_contig5549.13045.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5549.13045.1
Unique Nameprot_H-paniculata_contig5549.13045.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length430
Homology
BLAST of mRNA_H-paniculata_contig5549.13045.1 vs. uniprot
Match: D7FZA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA3_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 6.180e-41
Identity = 133/436 (30.50%), Postives = 207/436 (47.48%), Query Frame = 0
Query:    1 MLEEGIAVDGEVLAPYVKAIMLGGDCEQAIGVRKRYRKADDESKIRKDLGFLETPVGGK--VGRTRAVLDSIVCEGLVNNGKAEEAIEELFYALQMIPTAQDMQPSDLLC-------LDEYNGMLLTGIRACAASKLPGTWAMAVEFLEMVETRWAMGP----------GVEGGHA--DWRVMSKVSRASRRSVYDQMVTLLDQQGAPQAQVRKVLERGLRNGSVLLLRDS-GSRYPELALELQQNWGPESARVVLRCILEDVLQDEDFFVNNTQYALAEHVHHELLREFGPTHEWFSFEGPQMKGRRRLYLDGGLNPVRHDERRGYNASEWDDREDAGIVIRDDR--DRVSWPKFDQEYWYRRASMNTRTGEARLTISTELESRPGTVRSELQRFALEGVVPSLALNIDVDNKKKCLVLRSSVVRYWAASNPSFV 412
            M  EGI   G +LA Y+ ++M   D + A+ VR+RYR  ++E +    L   E  V     V R  AV+D +V  GLV+N + + A   L Y L+++   ++   SD+         +DE N  +L GIRAC   K  G+   A+  LE  E RWA GP          G EG  A  +WR M   +R SRR +YD ++++LD++      +R+VLERG+RNG+V L++D  G    + A++    W   SA  ++RCI+ED+   +DF     QY L      + LREFG   + +  + P  +GRRR + DG + P R  ER  Y      + E     ++ +   D     +    +W ++  ++   G  R          P  +R+ ++ F + GV P L +     N    L +    V+ W   NP  +
Sbjct:  541 MCGEGIRPHGGMLASYLLSLMRSADWKTALDVRERYRGDEEEFQ----LSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLA---LAYVLEVLKAREEEGASDIGSDSDLKHFIDEDNHTVLAGIRAC---KQVGSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQWAQHEWRQMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMRNGAVSLMKDQQGGTSADQAVDFH-GWSTRSAGCIVRCIIEDLTLGQDFLHRTGQYDLGRAALAQGLREFGNVSDRWHVDSPDPRGRRREFADG-VTPARFAERE-YGKGRKRNPESTPRWVKPEGGWDGCGSDESQARWWEKQKRLSLVVGRPR---------PPPCIRNAVEEFCMLGVSPPLRVQKAASNPG-ILTIEPEDVQAWLGRNPRIL 953          
BLAST of mRNA_H-paniculata_contig5549.13045.1 vs. uniprot
Match: A0A6H5L791_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L791_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 6.060e-40
Identity = 128/426 (30.05%), Postives = 201/426 (47.18%), Query Frame = 0
Query:   12 VLAPYVKAIMLGGDCEQAIGVRKRYRKADDESKIRKDLGFLETPVGGK--VGRTRAVLDSIVCEGLVNNGKAEEAIEELFYALQMIPTAQDMQP--------SDLL-CLDEYNGMLLTGIRACAASKLPGTWAMAVEFLEMVETRWAMGP-----GVEGGHAD-------WRVMSKVSRASRRSVYDQMVTLLDQQGAPQAQVRKVLERGLRNGSVLLLRDS-GSRYPELALELQQNWGPESARVVLRCILEDVLQDEDFFVNNTQYALAEHVHHELLREFGPTHEWFSFEGPQMKGRRRLYLDGGLNPVRHDERR-GYNASEWDDREDAGIVIRDDRDRVSWPKFDQEYWYRRASMNTRTGEARLTISTELESRPGTVRSELQRFALEGVVPSLALNIDVDNKKKCLVLRSSVVRYWAASNPSFV 412
            +LA Y+ A+M  GD + A+ VR+RYR   +E +    L   E  V     V R  AV+D +V  GLV+N +   A   L Y L+++   ++ +         SDL   +DE N  +L GIRAC   K  G+   A+  LE  E RWA GP     G  GG  +       WR M   +R SRR +YD ++++LD++      +R+VLE G++NG+V L++D  G    + A++    W   SAR ++RCI+ED+   +DF     QY L      + LREFG   + +  + P  +GRRR + DG + P R  ER  G       +++   +      D     +    +W ++  ++   G+ R          P  +R+ ++ F + GV P L +     N    L +    V+ W   NP  +
Sbjct:    1 MLASYLLALMRSGDWKTALDVRERYRGDKEEFQ----LSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPGLA---LAYVLEVLKAREEGKEGASGNGNDSDLKHFIDEDNHTVLAGIRAC---KQAGSCETAIGLLEACEARWAKGPLERDAGSGGGSEEGQWAQYEWRAMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLETGMKNGAVSLMKDQQGGTSADQAVDFH-GWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGRVALAQGLREFGNVSDRWHVDSPDPRGRRREFADG-VTPARFAEREYGKGRKRNPEKKSHWVKPEGGWDGRGSDESQARWWEKQKRLSLVVGKPR---------PPPCIRNAVEEFCMLGVSPPLRVQKAASNPG-ILTIEPEDVQAWLERNPRVL 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5549.13045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZA3_ECTSI6.180e-4130.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L791_9PHAE6.060e-4030.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5549contigH-paniculata_contig5549:1052..7180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5549.13045.1mRNA_H-paniculata_contig5549.13045.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5549 1039..8027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5549.13045.1 ID=prot_H-paniculata_contig5549.13045.1|Name=mRNA_H-paniculata_contig5549.13045.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=430bp
MLEEGIAVDGEVLAPYVKAIMLGGDCEQAIGVRKRYRKADDESKIRKDLG
FLETPVGGKVGRTRAVLDSIVCEGLVNNGKAEEAIEELFYALQMIPTAQD
MQPSDLLCLDEYNGMLLTGIRACAASKLPGTWAMAVEFLEMVETRWAMGP
GVEGGHADWRVMSKVSRASRRSVYDQMVTLLDQQGAPQAQVRKVLERGLR
NGSVLLLRDSGSRYPELALELQQNWGPESARVVLRCILEDVLQDEDFFVN
NTQYALAEHVHHELLREFGPTHEWFSFEGPQMKGRRRLYLDGGLNPVRHD
ERRGYNASEWDDREDAGIVIRDDRDRVSWPKFDQEYWYRRASMNTRTGEA
RLTISTELESRPGTVRSELQRFALEGVVPSLALNIDVDNKKKCLVLRSSV
VRYWAASNPSFVEDGQDDDDDDGTVARDS*
back to top