mRNA_H-paniculata_contig5548.13042.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 232 bits (592), Expect = 2.910e-72 Identity = 102/143 (71.33%), Postives = 126/143 (88.11%), Query Frame = 1
Query: 1 QGANEEFLEMSFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
Q NEE +EM F V+FVV+ TAP +G+LVGD+LYVNAPDGYRNIV+KVKHMMGLVRH+DFK+LLKADDD+FVCV+R+A FL++QPE++KDKIYAGVPTACN NP+ +GRV+++ DKWYD+KFV HTL+GLDC+PVYMQ
Sbjct: 221 QEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACNSPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQ 363
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 185 bits (470), Expect = 8.190e-56 Identity = 86/143 (60.14%), Postives = 107/143 (74.83%), Query Frame = 1
Query: 1 QGANEEFLEMSFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
+G N E E + VVFV+S+ TAP EG+LVGDILYV P+GYRNIV K K M+ LVRH DF++LLKADDDSFVC+ R+A L+D + K+YAGVPTACN TNP+ GRV++N +W+D K+V+HTL GLDCFP YMQ
Sbjct: 62 EGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVYAGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQ 204
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 183 bits (465), Expect = 4.720e-52 Identity = 85/143 (59.44%), Postives = 106/143 (74.13%), Query Frame = 1
Query: 1 QGANEEFLEMSFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
+G N E E + VVFV+S+ TAP EG+LVGDILYV P+GYRNIV K K M+ LVRH DF +LLKADDDSFVC+ R+A L+D + + K+Y GVPTACN TNP+ GRV++N +W+D K+V+HTL GLDCFP YMQ
Sbjct: 398 EGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVYVGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQ 540
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 162 bits (411), Expect = 7.000e-48 Identity = 73/130 (56.15%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 40 VVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
V+F+VS A EG LVGDILYV P GYRNIV K K M+ +V H + KYL+K+DDD+FVC+ RVA+ ++ P K+K+YAG+PTAC L++NP+ IGRV+++ + KW+D KFV HTL GLDC+P Y Q
Sbjct: 3 VLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVYAGIPTACGLESNPH--IGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQ 130
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.030e-43 Identity = 68/133 (51.13%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 31 SFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
+F V++VV P A G L+ D+L+V GYRNI K K M+ V+HV FKYLLK DDD+FVC++R A ++ P K K+Y G+PTAC+L NPN +G+V+ + DKWYD K++ HT++GLDC+PVYMQ
Sbjct: 190 TFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQ 322
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 157 bits (397), Expect = 2.190e-43 Identity = 67/133 (50.38%), Postives = 95/133 (71.43%), Query Frame = 1
Query: 31 SFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
+F V++VV P A G L+ D+L+V GYRNI K K M+ V+HV FKYLLKADDD+FVC++R A ++ P K K+Y G+PTAC+L NP+ ++G+V+ + +KWYD K++ HT++GLDC+PVYMQ
Sbjct: 230 TFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHLPNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQ 362
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.190e-43 Identity = 69/132 (52.27%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 34 FLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
F +VFV AP +G L GD L +NAPDGYRNIVHK K M+ L++HV+FKYL+K+DDD+FVCV++V L++ PE+ K K+YAGVPT CN+ + + +GRV + KWYDE++V HT+ ++C+P Y Q
Sbjct: 159 FKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVYAGVPTHCNMPGH--QMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQ 288
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: A0A835Z4X8_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X8_9STRA) HSP 1 Score: 154 bits (389), Expect = 3.870e-43 Identity = 70/141 (49.65%), Postives = 98/141 (69.50%), Query Frame = 1
Query: 1 QGANEEFLEMSFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVY 423
Q AN + + V+F+VS P AP +G L GD+LYV P+GYRNIV K K M+ +V H +FKYL+K+DDD+ VC+ +VA+ + P +D++YAGVPTAC L+ + D GR++++ KW+D KFV HTL GLDC+P Y
Sbjct: 64 QDANGLSHDYTVKVLFLVSHPDAPEDGLLDGDVLYVRCPEGYRNIVLKTKAMLSVVAHFNFKYLMKSDDDTVVCLNKVAKRMAVLPPAVQDRVYAGVPTACGLEAH--SDSGRIIRDPTHKWHDAKFVAHTLGGLDCYPAY 202
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: A0A835YVE3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE3_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.310e-17 Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 1
Query: 31 SFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVDFKYLLKADDDSFVCVKRVAQFLYDQPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
SF FVV++P AP EG L G+ VN P+GY + K M L H+DF++L+K D D++ C++RV + L+ + + ++YAG+ C G++ H K +D +F T + C P+Y Q
Sbjct: 86 SFRKYFVVADPNAPPEGTLTGEFFRVNVPNGYDRLADKTLATMALRHHLDFRFLVKTDADTYPCLQRVIETLHARGVAREPRLYAGLLNRC----------GKLFPAGH-KLHDAQFQAATGGVVPCHPMYHQ 207
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.030e-13 Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 1
Query: 253 QPEQAKDKIYAGVPTACNLQTNPNKDIGRVVQNSHDKWYDEKFVRHTLSGLDCFPVYMQ 429
Q + + ++YAGVPTAC + N N ++GRV+ + ++WYD KFV HT+ GL C+PVYMQ
Sbjct: 422 QTQATQRRLYAGVPTACGVHRN-NPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQ 479 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5548.13042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5548.13042.1 >prot_H-paniculata_contig5548.13042.1 ID=prot_H-paniculata_contig5548.13042.1|Name=mRNA_H-paniculata_contig5548.13042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp MSFLVVFVVSEPTAPREGKLVGDILYVNAPDGYRNIVHKVKHMMGLVRHVback to top mRNA from alignment at H-paniculata_contig5548:11733..13516+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5548.13042.1 ID=mRNA_H-paniculata_contig5548.13042.1|Name=mRNA_H-paniculata_contig5548.13042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1784bp|location=Sequence derived from alignment at H-paniculata_contig5548:11733..13516+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5548:11733..13516+ >mRNA_H-paniculata_contig5548.13042.1 ID=mRNA_H-paniculata_contig5548.13042.1|Name=mRNA_H-paniculata_contig5548.13042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig5548:11733..13516+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |