prot_H-paniculata_contig55452.13036.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig55452.13036.1
Unique Nameprot_H-paniculata_contig55452.13036.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: A0A699U3Y7_TANCI (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=2 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699U3Y7_TANCI)

HSP 1 Score: 65.9 bits (159), Expect = 4.890e-12
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    3 ENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            +NGVW  VE P N   V +  ++K+KT  DG V IYK RLVA G  Q  G  Y+E  SP     +I+I++++AA
Sbjct:   10 DNGVWVLVELPPNGKTVGSKWLFKKKTDMDGNVHIYKARLVAKGFTQTPGIDYEETFSPVADIRAIRILIAIAA 83          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: M7YBM7_TRIUA (Glutamyl-tRNA reductase n=2 Tax=Triticum TaxID=4564 RepID=M7YBM7_TRIUA)

HSP 1 Score: 69.3 bits (168), Expect = 5.130e-12
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT VE P ++  +    I+K+KT  DG + IYK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:   37 MYENKVWTLVELPVDRQAIENKWIFKKKTDADGNITIYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAA 112          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: UPI001A1815EF (Uncharacterized protein n=1 Tax=Streptomyces albiflaviniger TaxID=114683 RepID=UPI001A1815EF)

HSP 1 Score: 68.6 bits (166), Expect = 6.150e-12
Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    3 ENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            EN VWT V+ P ++  V    ++K+KT  DG V +YK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:    2 ENQVWTLVDLPNDRKAVGCKWVFKKKTDADGNVTVYKARLVAKGFRQIQGVDYDETYSPVAMLKSVRILLAIAA 75          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435)

HSP 1 Score: 68.6 bits (166), Expect = 9.490e-12
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT V+ P ++  +    I+K+KT  DG V +YK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:   34 MYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAA 109          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: UPI0020240260 (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020240260)

HSP 1 Score: 68.2 bits (165), Expect = 1.070e-11
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT  + P ++  +    I+K+KT  DG V IYK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:   42 MYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAA 117          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: UPI001F50BB81 (hypothetical protein n=1 Tax=Ligilactobacillus salivarius TaxID=1624 RepID=UPI001F50BB81)

HSP 1 Score: 67.8 bits (164), Expect = 1.260e-11
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT V+ P ++  +    I+K+KT  +G V +YK RLVA G RQ++G  Y+E  SP     S++I+L++AA
Sbjct:    1 MYENKVWTLVDLPDDRRAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAA 76          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D)

HSP 1 Score: 68.2 bits (165), Expect = 1.300e-11
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT  + P ++  +    I+K+KT  DG V IYK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:   42 MYENKVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAA 117          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: UPI002025788D (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025788D)

HSP 1 Score: 68.2 bits (165), Expect = 1.310e-11
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT  + P ++  +    I+K+KT  DG V IYK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:  218 MYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAA 293          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: M8AYK7_AEGTA (Reverse transcriptase Ty1/copia-type domain-containing protein n=6 Tax=Triticinae TaxID=1648030 RepID=M8AYK7_AEGTA)

HSP 1 Score: 68.2 bits (165), Expect = 1.320e-11
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT V+ P  +  +    I+K+KT  DG V +YK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:  779 MYENKVWTLVDLPDGRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAA 854          
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1)

HSP 1 Score: 68.2 bits (165), Expect = 1.330e-11
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    1 LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQMKGTHYQEASSPTPAAASIKIVLSLAA 76
            + EN VWT  + P ++  +    I+K+KT  DG V IYK RLVA G RQ++G  Y E  SP     S++I+L++AA
Sbjct:  501 MYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAA 576          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55452.13036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A699U3Y7_TANCI4.890e-1244.59Putative retrotransposon Ty1-copia subclass protei... [more]
M7YBM7_TRIUA5.130e-1244.74Glutamyl-tRNA reductase n=2 Tax=Triticum TaxID=456... [more]
UPI001A1815EF6.150e-1244.59Uncharacterized protein n=1 Tax=Streptomyces albif... [more]
UPI00202464359.490e-1243.42hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
UPI00202402601.070e-1143.42hypothetical protein n=1 Tax=Proteus mirabilis Tax... [more]
UPI001F50BB811.260e-1142.11hypothetical protein n=1 Tax=Ligilactobacillus sal... [more]
UPI002025A47D1.300e-1143.42hypothetical protein n=1 Tax=Proteus mirabilis Tax... [more]
UPI002025788D1.310e-1143.42hypothetical protein n=2 Tax=Proteus mirabilis Tax... [more]
M8AYK7_AEGTA1.320e-1143.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00202469D11.330e-1143.42DDE-type integrase/transposase/recombinase n=3 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..76
e-value: 5.4E-12
score: 45.9
NoneNo IPR availablePANTHERPTHR11439:SF244coord: 3..76
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55452contigH-paniculata_contig55452:10..240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55452.13036.1mRNA_H-paniculata_contig55452.13036.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig55452 10..240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig55452.13036.1 ID=prot_H-paniculata_contig55452.13036.1|Name=mRNA_H-paniculata_contig55452.13036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
LIENGVWTQVERPKNKLVVSTMMIYKRKTGQDGQVEIYKCRLVAHGNRQM
KGTHYQEASSPTPAAASIKIVLSLAAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like