prot_H-paniculata_contig55448.13034.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig55448.13034.1
Unique Nameprot_H-paniculata_contig55448.13034.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.060e-28
Identity = 58/67 (86.57%), Postives = 59/67 (88.06%), Query Frame = 0
Query:    4 LRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQ 70
            L    +GCEEYEAL AAKA ILDFVETRM SMAPNVCALIGSRITAQLL LTGGLTAMSKTPSCNLQ
Sbjct:  251 LHECIKGCEEYEALAAAKASILDFVETRMTSMAPNVCALIGSRITAQLLGLTGGLTAMSKTPSCNLQ 317          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A7S2XZL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL3_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.730e-18
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    1 PSLLRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            P  L +  QG  E + L  AK  IL+FVE+RM ++APN+CALIGSR+ AQLL L+GGLT +SK PSCNLQV
Sbjct:  155 PQDLDQCLQGAREVQDLEQAKTSILEFVESRMTAIAPNICALIGSRLAAQLLGLSGGLTQLSKIPSCNLQV 225          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A7S1U3H0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.800e-17
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 PSLLRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            P +L    +GCEE   L A +  +L FVE RM  +APNVCALIG+++ A+LLA+ GGL AMS+ PSCNLQV
Sbjct:  210 PEVLAECLKGCEEVNGLDADRRTLLSFVEGRMMGLAPNVCALIGAQVAARLLAIAGGLNAMSRVPSCNLQV 280          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A836CKH5_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH5_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.800e-16
Identity = 37/67 (55.22%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    4 LRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQ 70
            L+R  +GC E+ AL  AK+ +L FVE +M+++APN+CA+IGSRI AQL+   GGL A+S  P+CNLQ
Sbjct:  207 LKRVLEGCAEFTALAEAKSTLLTFVEGKMSAIAPNMCAIIGSRIAAQLMGQAGGLAALSNIPACNLQ 273          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A7S2C7I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.590e-15
Identity = 40/68 (58.82%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    4 LRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            L +  QGC E   L   K K L FVE+RMN +APNVCALI + I AQL+ L GGL  MSK PSCNLQ+
Sbjct:  198 LSQCMQGCREAVELEEDKMKSLTFVESRMNMVAPNVCALIDTIIAAQLMGLAGGLVMMSKIPSCNLQI 265          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A7R9UDN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDN0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.440e-15
Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    3 LLRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            +L+   +GCEE   L   + K+L FVE+RM S+APN CALIG+++ A+L+A+ GGL AMS+ PS NLQ+
Sbjct:  197 VLQECLKGCEEILGLDVDRRKLLSFVESRMMSLAPNTCALIGAQVAARLMAIAGGLQAMSRIPSSNLQL 265          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A1V9Y426_9STRA (U4/U6 small nuclear ribonucleoprotein Prp31 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y426_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.450e-15
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    1 PSLLRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            P  L+     CEE  AL + K KIL FVETRM  +APN+ ALIG+RITAQL+ + GG+  +S+ PSCN+QV
Sbjct:  190 PEELQMMLDTCEEVIALDSDKGKILQFVETRMIYLAPNLSALIGTRITAQLIGIAGGVDELSRIPSCNIQV 260          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A2K1XTC6_POPTR (Nop domain-containing protein n=12 Tax=Saliceae TaxID=238069 RepID=A0A2K1XTC6_POPTR)

HSP 1 Score: 77.0 bits (188), Expect = 7.610e-15
Identity = 34/69 (49.28%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    3 LLRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            +L++T + C+   AL +AK K+LDFVETRM  +APN+ A++GS + A+L+   GGLTA++K P+CN+Q+
Sbjct:  185 VLQKTIEACDRALALDSAKKKVLDFVETRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQL 253          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A388M7R3_CHABU (Nop domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M7R3_CHABU)

HSP 1 Score: 76.3 bits (186), Expect = 1.430e-14
Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    4 LRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            L++T   C+   AL  AK K+L FVE+RM  +APN+ A++GS I AQL+ + GGLTA+SK PSCN++V
Sbjct:  191 LKKTVDACDRALALDGAKTKVLSFVESRMAFIAPNLSAVVGSTIAAQLMGVAGGLTALSKMPSCNIRV 258          
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Match: A0A2K3PCW6_TRIPR (U4/U6 small nuclear ribonucleoprotein Prp31-like (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PCW6_TRIPR)

HSP 1 Score: 75.1 bits (183), Expect = 3.190e-14
Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    3 LLRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQLLALTGGLTAMSKTPSCNLQV 71
            +L +T + C+   AL +AK KILDFVE+RM  +APNV A++GS + A+L+   GGL+A++K P+CN+Q+
Sbjct:  113 VLNKTIEACDRALALDSAKKKILDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMPACNVQL 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55448.13034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8Q2_9PHAE3.060e-2886.57Nop domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2XZL3_9STRA2.730e-1860.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1U3H0_9STRA3.800e-1756.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A836CKH5_9STRA1.800e-1655.22Nop domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2C7I0_9STRA5.590e-1558.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9UDN0_9STRA7.440e-1552.17Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1V9Y426_9STRA7.450e-1554.93U4/U6 small nuclear ribonucleoprotein Prp31 (Fragm... [more]
A0A2K1XTC6_POPTR7.610e-1549.28Nop domain-containing protein n=12 Tax=Saliceae Ta... [more]
A0A388M7R3_CHABU1.430e-1452.94Nop domain-containing protein n=1 Tax=Chara brauni... [more]
A0A2K3PCW6_TRIPR3.190e-1449.28U4/U6 small nuclear ribonucleoprotein Prp31-like (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002687Nop domainPFAMPF01798Nopcoord: 5..71
e-value: 1.9E-21
score: 76.6
IPR002687Nop domainPROSITEPS51358NOPcoord: 35..71
score: 16.027
IPR042239Nop, C-terminal domainGENE3D1.10.246.90coord: 23..71
e-value: 2.3E-14
score: 55.0
IPR027105U4/U6 small nuclear ribonucleoprotein Prp31PANTHERPTHR13904PRE-MRNA SPLICING FACTOR PRP31coord: 4..71
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 7..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55448contigH-paniculata_contig55448:269..481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55448.13034.1mRNA_H-paniculata_contig55448.13034.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig55448 269..481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig55448.13034.1 ID=prot_H-paniculata_contig55448.13034.1|Name=mRNA_H-paniculata_contig55448.13034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
PSLLRRTSQGCEEYEALVAAKAKILDFVETRMNSMAPNVCALIGSRITAQ
LLALTGGLTAMSKTPSCNLQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002687Nop_dom
IPR042239Nop_C
IPR027105Prp31
IPR036070Nop_dom_sf