prot_H-paniculata_contig5541.13027.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5541.13027.1
Unique Nameprot_H-paniculata_contig5541.13027.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length295
Homology
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 8.380e-62
Identity = 113/285 (39.65%), Postives = 163/285 (57.19%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ 294
            Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E SA +I+ MD  E R I   +G+ QGDG+GP  FF I + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L HMPDKQ A L+ ++S   ++  + R ++ +L   AC+  DN  +WVLE  +       E  FF   C  +R  L P+Q
Sbjct:   90 QTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFI-LFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVLTEGGADKLARMLVHMPDKQVAHLVTSQSLTQRSGNIERGINHKLVRGACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQ 372          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 9.190e-58
Identity = 110/292 (37.67%), Postives = 170/292 (58.22%), Query Frame = 0
Query:    3 LRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ 294
            + A+   Q G+W+I  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  +++MD  E R +   +G+ QGDG+GP  F  I + PI+ K +++Y+ LGV    Y+DD+ L +  LTEE++QA+  LV +LA +G+  N AK+ A+ P  H+  +++   L  +G++V   G   VVG PIGTD +V++ A+ V+ E G E LAR+L  M D+Q A LI + S   ++ ++ R +D  L+ +AC   DN   W LE  +       E  FF  GC    L L P+Q
Sbjct:  665 MEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILI-PIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVAGEG-ITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWALETGMGIEGTESEEEFFQQGCQDTDLKLRPYQ 954          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 9.350e-58
Identity = 109/285 (38.25%), Postives = 160/285 (56.14%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ 294
            Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  +V +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC+  DN  +WVLE  +       E  FF   C  +R  L P+Q
Sbjct:   49 QTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQ 331          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 1.420e-57
Identity = 109/286 (38.11%), Postives = 160/286 (55.94%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLV-LAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ 294
            Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD++ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC   +N  +WVLE  +       E  FF   C  +R  L P+Q
Sbjct:  133 QTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACERLENMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQ 416          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 9.540e-57
Identity = 110/285 (38.60%), Postives = 160/285 (56.14%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ 294
            Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC+  DN  +WVLE  +       E  FF   C  +R  L P+Q
Sbjct:  502 QTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQ 784          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 2.120e-56
Identity = 110/285 (38.60%), Postives = 158/285 (55.44%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ 294
            Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P        E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ +L R ++ +L   AC   DN  +WVLE  +       E  FF   C  +R  L P+Q
Sbjct:  523 QTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLERGINHKLVRGACERLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQ 805          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 5.250e-53
Identity = 105/281 (37.37%), Postives = 154/281 (54.80%), Query Frame = 0
Query:   11 LGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLL 291
            LG W++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR++  MPDKQ A L+ ++    ++  + R ++ +L   AC   DN  +WVLE  +      +E  FF   C  +R   L
Sbjct:  142 LGQWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMVVRMPDKQVAHLVTSQLLTQRSGNIERGINHKLVRGACERLDNMVMWVLEATMGLRDAEDEEEFFQDDCQPDRFKRL 420          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.680e-52
Identity = 102/258 (39.53%), Postives = 149/258 (57.75%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENIL 267
            Q GHW++  +C+NAFN+ KR AI+ + +     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q    LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G E LARLL  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC+  DN  +WVLE  +
Sbjct:  501 QTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVLEATM 756          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.440e-50
Identity = 101/258 (39.15%), Postives = 146/258 (56.59%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENIL 267
            Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PI TDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++  + R ++ EL    C   DN  +WVLE  +
Sbjct:  528 QTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIETDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGCIERGINHELVRGVCERPDNMVMWVLEATM 783          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5K2M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M1_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.800e-46
Identity = 96/285 (33.68%), Postives = 144/285 (50.53%), Query Frame = 0
Query:   10 QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ 294
            Q GHW++  +C+NAFN+ KR A++ + A     L  ++++CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K   +Y+ LGV                       I  LV +L  +G+  N  K+ A+ P        E   L   G+ + E G   VVG PIGTDA+V+  A+  + E G + LAR+L  MPDKQ A  + ++S   ++ ++ R ++ +L   AC   DN  +WVLE  +      +E  FF   C  +R  L P+Q
Sbjct:    8 QTGHWVVQTDCSNAFNTGKRTAVMAQAAKSVPDLVGYISRCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLGSKYDHLGV-----------------------IPDLVDELEAVGIIVNRGKSSALPPPGQDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDFAMKAITEGGADKLARMLVRMPDKQEAHFVISQSLTQRSGYIERGINHKLVRGACERLDNMVMWVLEATMGLRDTEDEEEFFQDDCQPDRFKLKPYQ 267          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KDD0_9PHAE8.380e-6239.65Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE9.190e-5837.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE9.350e-5838.25Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE1.420e-5738.11Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KMQ2_9PHAE9.540e-5738.60Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE2.120e-5638.60Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE5.250e-5337.37Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE2.680e-5239.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE1.440e-5039.15Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K2M1_9PHAE5.800e-4633.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 12..155
e-value: 1.7E-10
score: 40.8
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..176
score: 11.09

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5541contigH-paniculata_contig5541:3287..4171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5541.13027.1mRNA_H-paniculata_contig5541.13027.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5541 1210..6427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5541.13027.1 ID=prot_H-paniculata_contig5541.13027.1|Name=mRNA_H-paniculata_contig5541.13027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bp
MDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKC
YGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCR
EQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAK
TKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAV
TVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQ
ACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom