mRNA_H-paniculata_contig554.13024.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A6H5KEB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB3_9PHAE) HSP 1 Score: 466 bits (1199), Expect = 6.500e-160 Identity = 223/275 (81.09%), Postives = 244/275 (88.73%), Query Frame = 1
Query: 13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGG----GRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGGK 825
SV+WMGR+GG FL VGTN+S VQLWDA+KLRQVRTM+GHSARVGTLAWKRH+LSSGSRD I+QHDVR+ NHK+ATF GH QEVCGLKWSPDG+TLASGGNENFLCLWDASMSGRG GRSS H PR+ L QHQAAVKALAWCP QRHLL SGGGTADRTIKFWNTAN ++LNSVDTGSQVC+LQWS+HNKELVSSHGFSENQLCLWKYP+MLK++EFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFG+PP++K GK
Sbjct: 169 SVAWMGRDGGDFLGVGTNHSAVQLWDASKLRQVRTMSGHSARVGTLAWKRHVLSSGSRDSSIIQHDVRMPNHKMATFMGHEQEVCGLKWSPDGNTLASGGNENFLCLWDASMSGRGGAGXXXXXXXXXGRSSL-VHRPRRTLVQHQAAVKALAWCPSQRHLLASGGGTADRTIKFWNTANGAMLNSVDTGSQVCSLQWSQHNKELVSSHGFSENQLCLWKYPNMLKIKEFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGSPPNAKARGK 442
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: D7G9G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G0_ECTSI) HSP 1 Score: 465 bits (1196), Expect = 1.260e-158 Identity = 222/273 (81.32%), Postives = 243/273 (89.01%), Query Frame = 1
Query: 13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGG----GRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRG 819
SV+WMGR+GG FL VGTN+S VQLWDA+KLRQVRTM+GHSARVGTLAWKRH+LSSGSRD I+QHDVR+ NHK+ATF GH QEVCGLKWSPDG+TLASGGNENFLCLWDASMSGRG GRSS H PR+ L QHQAAVKALAWCP QRHLL SGGGTADRTIKFWNTAN ++LNSVDTGSQVC+LQWS+HNKELVSSHGFSENQLCLWKYP+MLK++EFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFG+PP++K G
Sbjct: 313 SVAWMGRDGGDFLGVGTNHSAVQLWDASKLRQVRTMSGHSARVGTLAWKRHVLSSGSRDSSIIQHDVRMPNHKMATFTGHEQEVCGLKWSPDGNTLASGGNENFLCLWDASMSGRGGAXXXXXXXXXXGRSSP-VHRPRRTLVQHQAAVKALAWCPSQRHLLASGGGTADRTIKFWNTANGAMLNSVDTGSQVCSLQWSRHNKELVSSHGFSENQLCLWKYPNMLKIKEFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGSPPNAKVG 584
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: B8CCL0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCL0_THAPS) HSP 1 Score: 374 bits (959), Expect = 5.430e-126 Identity = 180/274 (65.69%), Postives = 219/274 (79.93%), Query Frame = 1
Query: 13 SVSWMGREGGS---FLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHA----PRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSK 813
SVSW GG+ ++AVGTN++ VQLWD R++R++ GHSARVG L+W +H LSSG RD QI+QHDVR +NH V+T+ GH+QEVCGLKW+ +GSTLASGGNEN LCLWDA+MS RG+ G R+ N + PR L QH+AAVKALAWCPF R LL SGGGTADRTIKFWNT + ++LNS+DTGSQVC+L WSKH +E+ SSHGFSENQL LWKYP+M K++EF+GHT+RVLHMD SP+GS VVSAAADETLRFWD+FGTPP+ +
Sbjct: 150 SVSWANGVGGNNNQYIAVGTNHNAVQLWDTESERRLRSLDGHSARVGALSWNQHWLSSGGRDSQIIQHDVRSRNHIVSTYVGHTQEVCGLKWNDEGSTLASGGNENLLCLWDAAMSRRGNN---NGYNRTDPNFDSSNIGPRLQLMQHKAAVKALAWCPFHRGLLASGGGTADRTIKFWNTNSGAVLNSIDTGSQVCSLLWSKHQREICSSHGFSENQLILWKYPTMTKIQEFKGHTARVLHMDQSPNGSCVVSAAADETLRFWDVFGTPPNER 420
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A7S2PNL3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PNL3_9STRA) HSP 1 Score: 377 bits (969), Expect = 5.630e-126 Identity = 181/269 (67.29%), Postives = 215/269 (79.93%), Query Frame = 1
Query: 13 SVSWMGREGGSF-LAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKR 816
SVSW G + LAVGTN VQLWD +R +RTM GH+ARVG+LAW +H LSSG RD I+QHDVR +NH +T+ GH+QEVCGLKW+ DGS LASGGNEN+LCLWDA+MSG + G +S N+ +PR ILT H+AAVKALA+CPF RHLL SGGGTADR IKFWNT + ++LNSVDTGSQVC+L WSKHNKE+ SSHGFSENQL LW YP+M K++EF GHTSRVLHM SPDG+TVVSAAADETLRFWD+FG+PP+ ++
Sbjct: 248 SVSWSDTVGNAHCLAVGTNEGYVQLWDTVGMRLIRTMDGHTARVGSLAWNQHCLSSGGRDSIIVQHDVRSRNHSTSTYRGHTQEVCGLKWNEDGSVLASGGNENYLCLWDAAMSG--ASRNGNRNDNNSTNSVSPRFILTDHKAAVKALAFCPFNRHLLASGGGTADRCIKFWNTNSGAMLNSVDTGSQVCSLLWSKHNKEICSSHGFSENQLILWNYPTMTKIQEFTGHTSRVLHMAGSPDGATVVSAAADETLRFWDIFGSPPNKRK 514
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: K0SD14_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD14_THAOC) HSP 1 Score: 375 bits (963), Expect = 6.540e-124 Identity = 178/274 (64.96%), Postives = 221/274 (80.66%), Query Frame = 1
Query: 4 TDY--SVSWMGREGGS-FLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKR 816
TD+ SVSW+ +G S ++A+GTN++ VQLWD+ R++RT+ GHSARVG ++W +H LSSG RD I+QHDVR +NH V+T+ GH+QEVCGLKW+ +G+TLASGGNEN LCLWDASMS R G +++ PR LTQH+AAVKALAWCPF R LL SGGGTADRTIKFWNT + ++LNS+DTGSQVC++ WSKH +EL SSHGFSENQL LWKYP+M K++EF+GHT+RVLHMD SPDG VVSAAADETLRFWD+FG+PPS ++
Sbjct: 274 TDFVTSVSWVREKGNSHYIAIGTNHNMVQLWDSEAERRLRTLDGHSARVGAMSWNQHWLSSGGRDSLIVQHDVRSRNHVVSTYVGHTQEVCGLKWNDEGTTLASGGNENLLCLWDASMS---QRRRNNGQRPFDSSSLGPRLALTQHKAAVKALAWCPFHRGLLASGGGTADRTIKFWNTNSGAVLNSIDTGSQVCSILWSKHQRELCSSHGFSENQLILWKYPTMTKIQEFKGHTARVLHMDQSPDGGCVVSAAADETLRFWDVFGSPPSEQK 544
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A2D4BFE0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFE0_PYTIN) HSP 1 Score: 368 bits (945), Expect = 2.110e-122 Identity = 175/270 (64.81%), Postives = 206/270 (76.30%), Query Frame = 1
Query: 13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGG 822
SV W G S LA+GT++S VQLWD A ++QVR+M GHSARVG LAW +ILSSGSRD I+ HDVR + H VA + H QEVCGL+WSPDG+TLASGGN+N LCLW ASM G GSR THAP L H AAVKA+AWCP++R+LL +GGGTADRTIKFWNTAN +LLNSVDTGSQVC+L WS KEL+SSHG+S+N+LCLWKYPSM K++E GHTSRVLH+ SPDGSTVVS AADETLRFW +FG+ + + G
Sbjct: 252 SVQWSDVTGSSHLAIGTSDSVVQLWDVAAMKQVRSMNGHSARVGALAWSNYILSSGSRDSNIIHHDVRARQHNVAVLSSHEQEVCGLQWSPDGTTLASGGNDNTLCLWKASMIGSGSR------------THAPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTANGALLNSVDTGSQVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKAG 509
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A5D6XRA5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA5_9STRA) HSP 1 Score: 358 bits (920), Expect = 8.970e-120 Identity = 171/270 (63.33%), Postives = 201/270 (74.44%), Query Frame = 1
Query: 13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGG 822
SV W G S LA+GT+ S VQLWD A +QVR M GH++RVG LAW HILSSGSRD I+ HDVR + H++AT A H QEVCGL+WSPDG+TLASGGN+N LCLW AS AIG GG +P L H AAVKA+AWCP++R+LL +GGGTADRTIKFWNT N +LLNSVDTGSQVCAL WS KE++SSHG+S+N+LCLWKYPSM K++E GHTSRVLH+ SPDGSTVVS AADETLRFW +FG + + G
Sbjct: 162 SVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRAMGGHASRVGALAWNSHILSSGSRDSTIIHHDVRARTHQLATLASHEQEVCGLQWSPDGTTLASGGNDNALCLWKAS-------AIGSGGXXXXXXXQSPAHRLEHHSAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGALLNSVDTGSQVCALLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGPNRKASKAG 424
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A8K1CPY5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY5_PYTOL) HSP 1 Score: 356 bits (914), Expect = 4.310e-118 Identity = 171/271 (63.10%), Postives = 204/271 (75.28%), Query Frame = 1
Query: 13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTP-PSSKRGG 822
SV W G S LA+GT++S VQLWD A +QVR+M GHS+RVG LAW +ILSSGSRD I+ HDVR + H VAT + H QEVCGL WSPDG+TLASGGN+N LCLW +S G ++T P L QH AAVKA+AWCP++R+LL +GGGTADRTIKFWNT+N +LLNSVDTGSQVC+L WS KEL+SSHG+S+N+LCLWKYPSM K++E GHTSRVLH+ SPDGSTVVS AADETLRFW +FG+ +SK GG
Sbjct: 226 SVQWSDVSGSSHLAIGTSDSVVQLWDVAASKQVRSMNGHSSRVGALAWNNYILSSGSRDSSIIHHDVRARQHNVATLSSHEQEVCGLSWSPDGTTLASGGNDNTLCLWKSSTIG--------------SSTQEPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTSEKELLSSHGYSQNELCLWKYPSMAKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKSGG 482
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: K3X281_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X281_GLOUD) HSP 1 Score: 351 bits (901), Expect = 5.230e-117 Identity = 166/270 (61.48%), Postives = 204/270 (75.56%), Query Frame = 1
Query: 13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGG 822
SV W G S LA+GT+ S VQLWD A +QVR+M GHS+RVG LAW ++LSSGSRD I+ HDVR + H+++T H QEVCGL+WSPDG+TLASGGN+N LCLW AS +IG G N+ +P L H AAVKA+AWCP++R+LL +GGGTADRTIKFWNT+N +LLNSVDTGSQVC+L WS KE++SSHG+S+N+LCLWKYPSM K++E GHTSRVLH+ SPDGSTVVS AADETLRFW +FG+ + + G
Sbjct: 159 SVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRSMNGHSSRVGALAWNSYVLSSGSRDSTIIHHDVRARTHQLSTLTSHEQEVCGLQWSPDGTTLASGGNDNALCLWKAS-------SIGSG-----NSIQSPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKTSKTG 416
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A7S0KY15_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KY15_9STRA) HSP 1 Score: 347 bits (891), Expect = 1.820e-116 Identity = 170/269 (63.20%), Postives = 202/269 (75.09%), Query Frame = 1
Query: 13 SVSWMGREGGS-FLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKR 816
SVSW G S ++AVGTN+ +QLWD L++VRT+ GHS RV +LAW LSSG RD ILQHDVR NH V+T+ DG++LASGGNEN+LC+WDA+MSGR S G R+ PR +LTQH+AAVKALAWCPF+R LL SGGGTADRTIKFWNT N ++LNS+DTGSQVC+L WSKH ELVSSHGFSENQL LWKYP+M K++EF+GHTSRVLHM+ SPDG VVSAAADETLRFWD+FG PP+ ++
Sbjct: 84 SVSWATIPGHSKYIAVGTNSGNIQLWDGQALKKVRTLNGHSNRVSSLAWNNQWLSSGGRDSLILQHDVRSANHVVSTYXXXXXXXXXXXXXDDGTSLASGGNENYLCIWDAAMSGRSSNNRG----RTIQTEVTPRFLLTQHKAAVKALAWCPFRRGLLASGGGTADRTIKFWNTTNGTMLNSIDTGSQVCSLLWSKHQHELVSSHGFSENQLILWKYPTMTKIQEFKGHTSRVLHMEQSPDGGCVVSAAADETLRFWDLFGPPPNRRQ 348 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig554.13024.1 >prot_H-paniculata_contig554.13024.1 ID=prot_H-paniculata_contig554.13024.1|Name=mRNA_H-paniculata_contig554.13024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp MTDYSVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLback to top mRNA from alignment at H-paniculata_contig554:4231..7465- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig554.13024.1 ID=mRNA_H-paniculata_contig554.13024.1|Name=mRNA_H-paniculata_contig554.13024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3235bp|location=Sequence derived from alignment at H-paniculata_contig554:4231..7465- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig554:4231..7465- >mRNA_H-paniculata_contig554.13024.1 ID=mRNA_H-paniculata_contig554.13024.1|Name=mRNA_H-paniculata_contig554.13024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig554:4231..7465- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |