mRNA_H-paniculata_contig554.13024.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig554.13024.1
Unique NamemRNA_H-paniculata_contig554.13024.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A6H5KEB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB3_9PHAE)

HSP 1 Score: 466 bits (1199), Expect = 6.500e-160
Identity = 223/275 (81.09%), Postives = 244/275 (88.73%), Query Frame = 1
Query:   13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGG----GRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGGK 825
            SV+WMGR+GG FL VGTN+S VQLWDA+KLRQVRTM+GHSARVGTLAWKRH+LSSGSRD  I+QHDVR+ NHK+ATF GH QEVCGLKWSPDG+TLASGGNENFLCLWDASMSGRG            GRSS   H PR+ L QHQAAVKALAWCP QRHLL SGGGTADRTIKFWNTAN ++LNSVDTGSQVC+LQWS+HNKELVSSHGFSENQLCLWKYP+MLK++EFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFG+PP++K  GK
Sbjct:  169 SVAWMGRDGGDFLGVGTNHSAVQLWDASKLRQVRTMSGHSARVGTLAWKRHVLSSGSRDSSIIQHDVRMPNHKMATFMGHEQEVCGLKWSPDGNTLASGGNENFLCLWDASMSGRGGAGXXXXXXXXXGRSSL-VHRPRRTLVQHQAAVKALAWCPSQRHLLASGGGTADRTIKFWNTANGAMLNSVDTGSQVCSLQWSQHNKELVSSHGFSENQLCLWKYPNMLKIKEFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGSPPNAKARGK 442          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: D7G9G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G0_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 1.260e-158
Identity = 222/273 (81.32%), Postives = 243/273 (89.01%), Query Frame = 1
Query:   13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGG----GRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRG 819
            SV+WMGR+GG FL VGTN+S VQLWDA+KLRQVRTM+GHSARVGTLAWKRH+LSSGSRD  I+QHDVR+ NHK+ATF GH QEVCGLKWSPDG+TLASGGNENFLCLWDASMSGRG            GRSS   H PR+ L QHQAAVKALAWCP QRHLL SGGGTADRTIKFWNTAN ++LNSVDTGSQVC+LQWS+HNKELVSSHGFSENQLCLWKYP+MLK++EFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFG+PP++K G
Sbjct:  313 SVAWMGRDGGDFLGVGTNHSAVQLWDASKLRQVRTMSGHSARVGTLAWKRHVLSSGSRDSSIIQHDVRMPNHKMATFTGHEQEVCGLKWSPDGNTLASGGNENFLCLWDASMSGRGGAXXXXXXXXXXGRSSP-VHRPRRTLVQHQAAVKALAWCPSQRHLLASGGGTADRTIKFWNTANGAMLNSVDTGSQVCSLQWSRHNKELVSSHGFSENQLCLWKYPNMLKIKEFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGSPPNAKVG 584          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: B8CCL0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCL0_THAPS)

HSP 1 Score: 374 bits (959), Expect = 5.430e-126
Identity = 180/274 (65.69%), Postives = 219/274 (79.93%), Query Frame = 1
Query:   13 SVSWMGREGGS---FLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHA----PRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSK 813
            SVSW    GG+   ++AVGTN++ VQLWD    R++R++ GHSARVG L+W +H LSSG RD QI+QHDVR +NH V+T+ GH+QEVCGLKW+ +GSTLASGGNEN LCLWDA+MS RG+     G  R+  N  +    PR  L QH+AAVKALAWCPF R LL SGGGTADRTIKFWNT + ++LNS+DTGSQVC+L WSKH +E+ SSHGFSENQL LWKYP+M K++EF+GHT+RVLHMD SP+GS VVSAAADETLRFWD+FGTPP+ +
Sbjct:  150 SVSWANGVGGNNNQYIAVGTNHNAVQLWDTESERRLRSLDGHSARVGALSWNQHWLSSGGRDSQIIQHDVRSRNHIVSTYVGHTQEVCGLKWNDEGSTLASGGNENLLCLWDAAMSRRGNN---NGYNRTDPNFDSSNIGPRLQLMQHKAAVKALAWCPFHRGLLASGGGTADRTIKFWNTNSGAVLNSIDTGSQVCSLLWSKHQREICSSHGFSENQLILWKYPTMTKIQEFKGHTARVLHMDQSPNGSCVVSAAADETLRFWDVFGTPPNER 420          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A7S2PNL3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PNL3_9STRA)

HSP 1 Score: 377 bits (969), Expect = 5.630e-126
Identity = 181/269 (67.29%), Postives = 215/269 (79.93%), Query Frame = 1
Query:   13 SVSWMGREGGSF-LAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKR 816
            SVSW    G +  LAVGTN   VQLWD   +R +RTM GH+ARVG+LAW +H LSSG RD  I+QHDVR +NH  +T+ GH+QEVCGLKW+ DGS LASGGNEN+LCLWDA+MSG  +   G     +S N+ +PR ILT H+AAVKALA+CPF RHLL SGGGTADR IKFWNT + ++LNSVDTGSQVC+L WSKHNKE+ SSHGFSENQL LW YP+M K++EF GHTSRVLHM  SPDG+TVVSAAADETLRFWD+FG+PP+ ++
Sbjct:  248 SVSWSDTVGNAHCLAVGTNEGYVQLWDTVGMRLIRTMDGHTARVGSLAWNQHCLSSGGRDSIIVQHDVRSRNHSTSTYRGHTQEVCGLKWNEDGSVLASGGNENYLCLWDAAMSG--ASRNGNRNDNNSTNSVSPRFILTDHKAAVKALAFCPFNRHLLASGGGTADRCIKFWNTNSGAMLNSVDTGSQVCSLLWSKHNKEICSSHGFSENQLILWNYPTMTKIQEFTGHTSRVLHMAGSPDGATVVSAAADETLRFWDIFGSPPNKRK 514          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: K0SD14_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD14_THAOC)

HSP 1 Score: 375 bits (963), Expect = 6.540e-124
Identity = 178/274 (64.96%), Postives = 221/274 (80.66%), Query Frame = 1
Query:    4 TDY--SVSWMGREGGS-FLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKR 816
            TD+  SVSW+  +G S ++A+GTN++ VQLWD+   R++RT+ GHSARVG ++W +H LSSG RD  I+QHDVR +NH V+T+ GH+QEVCGLKW+ +G+TLASGGNEN LCLWDASMS    R    G     +++  PR  LTQH+AAVKALAWCPF R LL SGGGTADRTIKFWNT + ++LNS+DTGSQVC++ WSKH +EL SSHGFSENQL LWKYP+M K++EF+GHT+RVLHMD SPDG  VVSAAADETLRFWD+FG+PPS ++
Sbjct:  274 TDFVTSVSWVREKGNSHYIAIGTNHNMVQLWDSEAERRLRTLDGHSARVGAMSWNQHWLSSGGRDSLIVQHDVRSRNHVVSTYVGHTQEVCGLKWNDEGTTLASGGNENLLCLWDASMS---QRRRNNGQRPFDSSSLGPRLALTQHKAAVKALAWCPFHRGLLASGGGTADRTIKFWNTNSGAVLNSIDTGSQVCSILWSKHQRELCSSHGFSENQLILWKYPTMTKIQEFKGHTARVLHMDQSPDGGCVVSAAADETLRFWDVFGSPPSEQK 544          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A2D4BFE0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFE0_PYTIN)

HSP 1 Score: 368 bits (945), Expect = 2.110e-122
Identity = 175/270 (64.81%), Postives = 206/270 (76.30%), Query Frame = 1
Query:   13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGG 822
            SV W    G S LA+GT++S VQLWD A ++QVR+M GHSARVG LAW  +ILSSGSRD  I+ HDVR + H VA  + H QEVCGL+WSPDG+TLASGGN+N LCLW ASM G GSR            THAP   L  H AAVKA+AWCP++R+LL +GGGTADRTIKFWNTAN +LLNSVDTGSQVC+L WS   KEL+SSHG+S+N+LCLWKYPSM K++E  GHTSRVLH+  SPDGSTVVS AADETLRFW +FG+   + + G
Sbjct:  252 SVQWSDVTGSSHLAIGTSDSVVQLWDVAAMKQVRSMNGHSARVGALAWSNYILSSGSRDSNIIHHDVRARQHNVAVLSSHEQEVCGLQWSPDGTTLASGGNDNTLCLWKASMIGSGSR------------THAPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTANGALLNSVDTGSQVCSLLWSTTEKELLSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKAG 509          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A5D6XRA5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA5_9STRA)

HSP 1 Score: 358 bits (920), Expect = 8.970e-120
Identity = 171/270 (63.33%), Postives = 201/270 (74.44%), Query Frame = 1
Query:   13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGG 822
            SV W    G S LA+GT+ S VQLWD A  +QVR M GH++RVG LAW  HILSSGSRD  I+ HDVR + H++AT A H QEVCGL+WSPDG+TLASGGN+N LCLW AS       AIG GG        +P   L  H AAVKA+AWCP++R+LL +GGGTADRTIKFWNT N +LLNSVDTGSQVCAL WS   KE++SSHG+S+N+LCLWKYPSM K++E  GHTSRVLH+  SPDGSTVVS AADETLRFW +FG    + + G
Sbjct:  162 SVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRAMGGHASRVGALAWNSHILSSGSRDSTIIHHDVRARTHQLATLASHEQEVCGLQWSPDGTTLASGGNDNALCLWKAS-------AIGSGGXXXXXXXQSPAHRLEHHSAAVKAIAWCPWERNLLATGGGTADRTIKFWNTTNGALLNSVDTGSQVCALLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGPNRKASKAG 424          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A8K1CPY5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY5_PYTOL)

HSP 1 Score: 356 bits (914), Expect = 4.310e-118
Identity = 171/271 (63.10%), Postives = 204/271 (75.28%), Query Frame = 1
Query:   13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTP-PSSKRGG 822
            SV W    G S LA+GT++S VQLWD A  +QVR+M GHS+RVG LAW  +ILSSGSRD  I+ HDVR + H VAT + H QEVCGL WSPDG+TLASGGN+N LCLW +S  G              ++T  P   L QH AAVKA+AWCP++R+LL +GGGTADRTIKFWNT+N +LLNSVDTGSQVC+L WS   KEL+SSHG+S+N+LCLWKYPSM K++E  GHTSRVLH+  SPDGSTVVS AADETLRFW +FG+   +SK GG
Sbjct:  226 SVQWSDVSGSSHLAIGTSDSVVQLWDVAASKQVRSMNGHSSRVGALAWNNYILSSGSRDSSIIHHDVRARQHNVATLSSHEQEVCGLSWSPDGTTLASGGNDNTLCLWKSSTIG--------------SSTQEPAHRLEQHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTSEKELLSSHGYSQNELCLWKYPSMAKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKASKSGG 482          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: K3X281_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X281_GLOUD)

HSP 1 Score: 351 bits (901), Expect = 5.230e-117
Identity = 166/270 (61.48%), Postives = 204/270 (75.56%), Query Frame = 1
Query:   13 SVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKRGG 822
            SV W    G S LA+GT+ S VQLWD A  +QVR+M GHS+RVG LAW  ++LSSGSRD  I+ HDVR + H+++T   H QEVCGL+WSPDG+TLASGGN+N LCLW AS       +IG G     N+  +P   L  H AAVKA+AWCP++R+LL +GGGTADRTIKFWNT+N +LLNSVDTGSQVC+L WS   KE++SSHG+S+N+LCLWKYPSM K++E  GHTSRVLH+  SPDGSTVVS AADETLRFW +FG+   + + G
Sbjct:  159 SVQWSDVGGSSHLAIGTSESVVQLWDVAAQKQVRSMNGHSSRVGALAWNSYVLSSGSRDSTIIHHDVRARTHQLSTLTSHEQEVCGLQWSPDGTTLASGGNDNALCLWKAS-------SIGSG-----NSIQSPAHRLEHHTAAVKAIAWCPWERNLLATGGGTADRTIKFWNTSNGALLNSVDTGSQVCSLLWSTTEKEILSSHGYSQNELCLWKYPSMTKVKELTGHTSRVLHLAASPDGSTVVSGAADETLRFWKVFGSNRKTSKTG 416          
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Match: A0A7S0KY15_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KY15_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.820e-116
Identity = 170/269 (63.20%), Postives = 202/269 (75.09%), Query Frame = 1
Query:   13 SVSWMGREGGS-FLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTLAWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTLASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVKALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSKHNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVVSAAADETLRFWDMFGTPPSSKR 816
            SVSW    G S ++AVGTN+  +QLWD   L++VRT+ GHS RV +LAW    LSSG RD  ILQHDVR  NH V+T+              DG++LASGGNEN+LC+WDA+MSGR S   G    R+      PR +LTQH+AAVKALAWCPF+R LL SGGGTADRTIKFWNT N ++LNS+DTGSQVC+L WSKH  ELVSSHGFSENQL LWKYP+M K++EF+GHTSRVLHM+ SPDG  VVSAAADETLRFWD+FG PP+ ++
Sbjct:   84 SVSWATIPGHSKYIAVGTNSGNIQLWDGQALKKVRTLNGHSNRVSSLAWNNQWLSSGGRDSLILQHDVRSANHVVSTYXXXXXXXXXXXXXDDGTSLASGGNENYLCIWDAAMSGRSSNNRG----RTIQTEVTPRFLLTQHKAAVKALAWCPFRRGLLASGGGTADRTIKFWNTTNGTMLNSIDTGSQVCSLLWSKHQHELVSSHGFSENQLILWKYPTMTKIQEFKGHTSRVLHMEQSPDGGCVVSAAADETLRFWDLFGPPPNRRQ 348          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig554.13024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEB3_9PHAE6.500e-16081.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9G0_ECTSI1.260e-15881.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8CCL0_THAPS5.430e-12665.69Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2PNL3_9STRA5.630e-12667.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K0SD14_THAOC6.540e-12464.96Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A2D4BFE0_PYTIN2.110e-12264.81Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A5D6XRA5_9STRA8.970e-12063.33Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CPY5_PYTOL4.310e-11863.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X281_GLOUD5.230e-11761.48Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S0KY15_9STRA1.820e-11663.20Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig554contigH-paniculata_contig554:4231..7465 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.8
Seed ortholog evalue6.7e-129
Seed eggNOG ortholog2880.D7G9G0
Preferred nameCDC20
KEGG koko:K02084,ko:K03363,ko:K06709
KEGG Pathwayko01524,ko04110,ko04111,ko04113,ko04114,ko04115,ko04120,ko04210,ko04214,ko04215,ko05010,ko05012,ko05014,ko05016,ko05134,ko05152,ko05161,ko05166,ko05200,ko05203,ko05222,map01524,map04110,map04111,map04113,map04114,map04115,map04120,map04210,map04214,map04215,map05010,map05012,map05014,map05016,map05134,map05152,map05161,map05166,map05200,map05203,map05222
KEGG ModuleM00389,M00685
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000151,GO:0000152,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000819,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007062,GO:0007064,GO:0007088,GO:0007096,GO:0007127,GO:0007135,GO:0007143,GO:0007144,GO:0007147,GO:0007275,GO:0007276,GO:0007292,GO:0007346,GO:0007399,GO:0008022,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010498,GO:0010564,GO:0010604,GO:0010646,GO:0010720,GO:0010939,GO:0010941,GO:0010975,GO:0015630,GO:0016043,GO:0016567,GO:0016579,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019827,GO:0019899,GO:0019941,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0030154,GO:0030162,GO:0030163,GO:0030718,GO:0031145,GO:0031323,GO:0031325,GO:0031344,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031915,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033043,GO:0036211,GO:0040020,GO:0042127,GO:0042826,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0043902,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045595,GO:0045597,GO:0045664,GO:0045787,GO:0048167,GO:0048285,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050773,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050803,GO:0050804,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051225,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051276,GO:0051321,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051445,GO:0051446,GO:0051603,GO:0051704,GO:0051726,GO:0051783,GO:0051960,GO:0051962,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060547,GO:0060548,GO:0061630,GO:0061659,GO:0061982,GO:0061983,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070646,GO:0070647,GO:0070925,GO:0071704,GO:0071840,GO:0080090,GO:0090068,GO:0090128,GO:0090129,GO:0090307,GO:0097150,GO:0098687,GO:0098727,GO:0098813,GO:0099177,GO:0120035,GO:0140013,GO:0140014,GO:0140096,GO:1900193,GO:1900195,GO:1901564,GO:1901565,GO:1901575,GO:1901987,GO:1901990,GO:1902494,GO:1902850,GO:1903046,GO:1903047,GO:1903320,GO:1903322,GO:1903429,GO:1903431,GO:1903538,GO:1904146,GO:1904666,GO:1904668,GO:1905879,GO:1905881,GO:1990234,GO:2000026,GO:2000241,GO:2000243
EggNOG free text desc.Cell division cycle
EggNOG OGsCOG2319@1,KOG0305@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04121
Exons6
Model size827
Cds size825
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig554.13024.1prot_H-paniculata_contig554.13024.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig554 4231..7465 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930580.9913406-CDS-H-paniculata_contig554:4230..43481622930580.9913406-CDS-H-paniculata_contig554:4230..4348Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 4231..4348 -
1691481357.6763296-CDS-H-paniculata_contig554:4230..43481691481357.6763296-CDS-H-paniculata_contig554:4230..4348Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 4231..4348 -
1622930581.0078747-CDS-H-paniculata_contig554:4955..50861622930581.0078747-CDS-H-paniculata_contig554:4955..5086Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 4956..5086 -
1691481357.6985035-CDS-H-paniculata_contig554:4955..50861691481357.6985035-CDS-H-paniculata_contig554:4955..5086Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 4956..5086 -
1622930581.0247428-CDS-H-paniculata_contig554:5607..56611622930581.0247428-CDS-H-paniculata_contig554:5607..5661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 5608..5661 -
1691481357.7075126-CDS-H-paniculata_contig554:5607..56611691481357.7075126-CDS-H-paniculata_contig554:5607..5661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 5608..5661 -
1622930581.041624-CDS-H-paniculata_contig554:6140..64011622930581.041624-CDS-H-paniculata_contig554:6140..6401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 6141..6401 -
1691481357.7167153-CDS-H-paniculata_contig554:6140..64011691481357.7167153-CDS-H-paniculata_contig554:6140..6401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 6141..6401 -
1622930581.0580132-CDS-H-paniculata_contig554:6694..68471622930581.0580132-CDS-H-paniculata_contig554:6694..6847Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 6695..6847 -
1691481357.7275858-CDS-H-paniculata_contig554:6694..68471691481357.7275858-CDS-H-paniculata_contig554:6694..6847Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 6695..6847 -
1622930581.0776637-CDS-H-paniculata_contig554:7357..74651622930581.0776637-CDS-H-paniculata_contig554:7357..7465Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 7358..7465 -
1691481357.737987-CDS-H-paniculata_contig554:7357..74651691481357.737987-CDS-H-paniculata_contig554:7357..7465Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig554 7358..7465 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig554.13024.1

>prot_H-paniculata_contig554.13024.1 ID=prot_H-paniculata_contig554.13024.1|Name=mRNA_H-paniculata_contig554.13024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MTDYSVSWMGREGGSFLAVGTNNSTVQLWDAAKLRQVRTMTGHSARVGTL
AWKRHILSSGSRDHQILQHDVRVQNHKVATFAGHSQEVCGLKWSPDGSTL
ASGGNENFLCLWDASMSGRGSRAIGGGGGRSSNNTHAPRKILTQHQAAVK
ALAWCPFQRHLLGSGGGTADRTIKFWNTANDSLLNSVDTGSQVCALQWSK
HNKELVSSHGFSENQLCLWKYPSMLKMREFRGHTSRVLHMDTSPDGSTVV
SAAADETLRFWDMFGTPPSSKRGGK
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mRNA from alignment at H-paniculata_contig554:4231..7465-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig554.13024.1 ID=mRNA_H-paniculata_contig554.13024.1|Name=mRNA_H-paniculata_contig554.13024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3235bp|location=Sequence derived from alignment at H-paniculata_contig554:4231..7465- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTGACTACAGCGTGTCGTGGATGGGAAGAGAGGGTGGCAGCTTCCT GGCAGTGGGGACAAATAATAGCACCGTCCAGCTGTGGGATGCCGCTAAGC TTCGCCAGGTGAAAAAACTGAAGAATACTCAACAGGCAGTGTACTGTATC CTGGAAGATGACAATAGGAAACATGAAAAGCCTCTATCTATTTTCAAGGG CATGGTGCTGCTTGATGTCGGACAACTTGATTTCGTGTATACCTTGAGTG AGTTTGGACGGGCAATAAACACTTGATAAATAGTAGCTGCGATGAGGGGA TACACCTTCTCATCGGTAAATATTTGTAGAAATCTGCTGACCTGTCGTCG CAACGAATAGAGAAATAGACCGTACTTGGCATGTGAACGAACGGCCTCCC ACCTACCGTCTGGCCTGCCAATAGTTTTTTTTTGTAACTGTAGATGGCCA AAAATGAGCGACGGGTATGACCCATACTGTGAAATAACTGGGTTGGGCAT GCTTTCACCATGTCGGCCACTCACCTCGCGTCTGGCAACAGGTATAATAC GAAGGCTGGTGATGTAAGGAAACATTATTCATTAGTGATGACCATGTACT GATGAAAATATTGGGCAGGTCCGCACCATGACGGGGCACTCTGCGCGCGT CGGAACCCTCGCCTGGAAACGCCACATTCTCTCATCGGGATCCCGAGACC ATCAAATTCTGCAGCATGACGTACGGGTGCAGAATCACAAGGTCGCTACT TTCGCAGGCCACAGTCAGGAGGTGTGTGTGTGTGGTATTCACATGGATGG TAAAAGTATGTTTTCTTGACTAAATGTAACGTTCACTGAAGACATGAATT TTTCGCCCAAGTTTTGCCAGGAACAGACACACCAAATTAAGTAGCCGCCC CCGTCTTCGATTTACGAGTATTATTAGCAGTCGTGGATGTTCTGGGTGTA AATGGAAAACGTGAGCTTATTCTGAAGTTCAGGCAAAATATTCGTTACTT GTGAAAACCATCAGGGGGATGAATTTGAATATTTAAAATGTGTTCTCATT GTTCGTGGTTCTAGGTGTGTGGACTGAAGTGGTCCCCCGACGGTAGCACT CTGGCATCTGGGGGTAACGAGAACTTCCTCTGTCTGTGGGACGCCAGCAT GAGCGGCAGGGGGTCTAGAGCGATTGGGGGAGGTGGTGGCAGGTCGTCGA ACAACACTCACGCACCGCGAAAGATCCTGACACAGCACCAGGCGGCTGTG AAGGCTTTGGCTTGGTGTCCTTTTCAACGGCACCTCCTGGGCTCCGGGGG CGGAACAGCTGACCGCACTATCAAGGTATGAATCCTCATATGTGTAAAAA AACCCCAAGCGACATGTAATCTGTATGCATCACTCAAGCCACGAGAGGAC GGCAGTTTGGATCTCGATATGCCTTTATACGGAGTACCCCGAGTAGAGCC AGAGCTGTCCATGACCTTGTCCTACAGTGCACTGTAAGGTAGAAAACAAC GAAAACTCTGTAGTAATTCAAAACTCAACTCGTTCATCTTATATTGGGGA ACGAGTTTTTGGCAAAATGTTACTCGCTGGACGTTTTTACTGTCGGATTT CCCGTGAGTTTGACTGCTTTTAGATTTAATCTCGATGATTTTTGTGTTCT TAGTGGAAATTAACGGTTTGATTTTTTATGTTGCCTTGGGCGAGTGACTC ATACGGACGAATGTTGTCAATGCCCTGCATTTTCTTGCTCGTCTTTGCTG GATTTTTTTTTTTCGCGTAACTTCGATCCGGTGCCACAACTGTACCCGCG GCAGTTCTGGAACACCGCTAACGACTCTCTGCTCAACTCGGTCGACACGG GCAGTCAGGTGGGTGGGGTAAATACACTATATAGTCCAGTCGCGGTAAGG TATTATCGTTGTAGATCAGCCAATGCTGGGGCTCATACACGTCTTATATT GATGCATTGGGAACATCCTGTTGACAACAGTTCGTACCAAGTACTTGATA TTTGCGATGTGTATGAGGCGTCTGTAATCAAGATGTTGAAGTTGAAAAGG ATATACTTCTTCAGCCCCCACCCTGATACCTTGTTTAAGGGTAAGCATTG TGCTTCACTTCATCCCAGGTGCATAGACTTGAAAGCAAGAGTGACACTCA AGTGGATGTCCATACGAAAATCGTCACTACGGCACTCGTGACGCCGACGT CTTGAGTTTTGTCTACCACACCAACTTGAAACTTTCGAATTTGTGATCCT CGACGTTGCAATACAGCCTGAAGTGCCCTTACGTCAACAGGCTTGGGATT TTAGTGCATAATATCTGCTATCTTTTAGTAGGAGACTAGCTAAATTGGGG GCGTCTCTCAATCCTATTTTCTGTAACAGGTTTGCGCTCTTCAGTGGTCA AAGCACAATAAAGAGCTCGTTTCATCCCACGGCTTCAGCGAGAACCAACT CTGTCTGTGGAAGTACCCGTCCATGCTAAAGATGAGGGAGTTCAGGGGGC ACACGTCCAGGTGGGTTCATATAATACAGTACCCTATAGGCGACCTTTGA GGTACCACGATGTTGAGCCAATGGGGGAACGGCACCTTTTTAGGGATTGC TCGACTGTTTGAAATACGCCAGTGATATTAAAAAACGATTCTGCCCCACC TGTTACCTCAACATTCATCACTGACAGTAGTACTTGGGTTTTCTGCGTAC CTTATTTTGGCGATCGGCACCCGTCAGTACCTTTTTGAGCAATGCAATCA ACTCCTTCATTTTGAGATGACGGGAAGCCTGGAACCGTTACGGGGCAAAA TCCAGGAAGCACCTCGAGACTAGGGTTTAGGGCGGTGTACTTGCAAGGTT GGTCCTACACCCCCCTTAAATTTGATGGCGGTACAAAGGTGTACAAGCTG CGAGTGCATGTTTGTTGCCCAAGAGGCATGTGTCTGCGGTATCATGGGTA CCTCCGTCGGGTAAAAATTGGTTTGAAGATGAACCAGTCGGTAAACTGGC ATGGGATTGCTGGACGGAATATTTCCAGTAAAGTAACAGAAGGGTTTTTC CTCTGGTTTCCCGGAGATTGGAAAAAAACTGCTTTGATTTGAAAATGGGG ATCGTTGCGTCTTACAGGGTGCTGCACATGGATACGTCTCCTGACGGGTC CACGGTGGTTTCAGCTGCGGCAGACGAGACACTCCGCTTTTGGGACATGT TCGGGACCCCGCCTAGCTCCAAGCGCGGTGGTAAA
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Coding sequence (CDS) from alignment at H-paniculata_contig554:4231..7465-

>mRNA_H-paniculata_contig554.13024.1 ID=mRNA_H-paniculata_contig554.13024.1|Name=mRNA_H-paniculata_contig554.13024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig554:4231..7465- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTGACTACAGCGTGTCGTGGATGGGAAGAGAGGGTGGCAGCTTCCT
GGCAGTGGGGACAAATAATAGCACCGTCCAGCTGTGGGATGCCGCTAAGC
TTCGCCAGATGACTGACTACAGCGTGTCGTGGATGGGAAGAGAGGGTGGC
AGCTTCCTGGCAGTGGGGACAAATAATAGCACCGTCCAGCTGTGGGATGC
CGCTAAGCTTCGCCAGGTCCGCACCATGACGGGGCACTCTGCGCGCGTCG
GAACCCTCGCCTGGAAACGCCACATTCTCTCATCGGGATCCCGAGACCAT
CAAATTCTGCAGCATGACGTACGGGTGCAGAATCACAAGGTCGCTACTTT
CGCAGGCCACAGTCAGGAGGTCCGCACCATGACGGGGCACTCTGCGCGCG
TCGGAACCCTCGCCTGGAAACGCCACATTCTCTCATCGGGATCCCGAGAC
CATCAAATTCTGCAGCATGACGTACGGGTGCAGAATCACAAGGTCGCTAC
TTTCGCAGGCCACAGTCAGGAGGTGTGTGGACTGAAGTGGTCCCCCGACG
GTAGCACTCTGGCATCTGGGGGTAACGAGAACTTCCTCTGTCTGTGGGAC
GCCAGCATGAGCGGCAGGGGGTCTAGAGCGATTGGGGGAGGTGGTGGCAG
GTCGTCGAACAACACTCACGCACCGCGAAAGATCCTGACACAGCACCAGG
CGGCTGTGAAGGCTTTGGCTTGGTGTCCTTTTCAACGGCACCTCCTGGGC
TCCGGGGGCGGAACAGCTGACCGCACTATCAAGGTGTGTGGACTGAAGTG
GTCCCCCGACGGTAGCACTCTGGCATCTGGGGGTAACGAGAACTTCCTCT
GTCTGTGGGACGCCAGCATGAGCGGCAGGGGGTCTAGAGCGATTGGGGGA
GGTGGTGGCAGGTCGTCGAACAACACTCACGCACCGCGAAAGATCCTGAC
ACAGCACCAGGCGGCTGTGAAGGCTTTGGCTTGGTGTCCTTTTCAACGGC
ACCTCCTGGGCTCCGGGGGCGGAACAGCTGACCGCACTATCAAGTTCTGG
AACACCGCTAACGACTCTCTGCTCAACTCGGTCGACACGGGCAGTCAGTT
CTGGAACACCGCTAACGACTCTCTGCTCAACTCGGTCGACACGGGCAGTC
AGGTTTGCGCTCTTCAGTGGTCAAAGCACAATAAAGAGCTCGTTTCATCC
CACGGCTTCAGCGAGAACCAACTCTGTCTGTGGAAGTACCCGTCCATGCT
AAAGATGAGGGAGTTCAGGGGGCACACGTCCAGGTTTGCGCTCTTCAGTG
GTCAAAGCACAATAAAGAGCTCGTTTCATCCCACGGCTTCAGCGAGAACC
AACTCTGTCTGTGGAAGTACCCGTCCATGCTAAAGATGAGGGAGTTCAGG
GGGCACACGTCCAGGGTGCTGCACATGGATACGTCTCCTGACGGGTCCAC
GGTGGTTTCAGCTGCGGCAGACGAGACACTCCGCTTTTGGGACATGTTCG
GGACCCCGCCTAGCTCCAAGCGCGGTGGTAAAGGTGCTGCACATGGATAC
GTCTCCTGACGGGTCCACGGTGGTTTCAGCTGCGGCAGACGAGACACTCC
GCTTTTGGGACATGTTCGGGACCCCGCCTAGCTCCAAGCGCGGTGGTAAA
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