mRNA_H-paniculata_contig12045.1302.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12045.1302.1
Unique NamemRNA_H-paniculata_contig12045.1302.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF49_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 2.980e-73
Identity = 159/329 (48.33%), Postives = 194/329 (58.97%), Query Frame = 3
Query:  432 VVCSSQGRRL*ESIGASGGEHLQDQPFESQRHQQPLVGQQHPVGNHRRRKRQGYQERRRPTASHPRSG---RTSFTSLSTTSTKPGAKSFAVRWRSV*WSTATQTKRCQTAR*EGCCRGSVIGAVGAGSKHPR*MRRGSRVFLYFSLKWTLRKGRGCGAGSSRVHG*EFVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409
            +     G+   E+I    GEH+QD+P E Q  QQPLVG    V +H R +RQ ++E R     H   G   + S  S+    ++ G K    R          +T R   AR     R  V   +   ++       G  V +Y                        FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL      + FPIEEGWFK K  G+GK+G KDFN+EDE+TAEF   AKLAKGDYHAAMTD+MFMEWLE+R +PA+NA  +F+  KMILV DNASYH  FD+EVKVPETN K YNV+
Sbjct:  146 ISLRKDGQSENEAILRVSGEHIQDRPREGQTRQQPLVGTPRVVRDHLRGERQDHEEGRPAALCHRTCGFEEQPSNRSVGGLLSRLGYKRRRGR---------IKTPRLDAARLARIRRFLVEMDIAKRAEDA-----GLAVIVYMDES--------------------FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGFPIEEGWFKSKGGGKGKRGGKDFNLEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLERRLSPAYNAVPDFKGKKMILVRDNASYHQGFDAEVKVPETNTKKYNVE 438          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 4.640e-65
Identity = 133/231 (57.58%), Postives = 152/231 (65.80%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVDCC-------VSMERG*SR*SVPLPTAQLWSTASRYQQNLVLHSPRCGASGRC*QRGGSVGHSRVFPPSLP 1598
            FVHQAHGS  SYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL        FPIEEGWFK  E G GK+      MEDE+TAEF    KLAKGD HAAMTD+MFMEWLE R  PA+NA  EF+  +MILVLDNASYHH FD+EVKVPE+N K +NVD         +S++R      V     QL  T   +        P     GRC Q GGS GHS ++PP  P
Sbjct:  248 FVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCYG--FPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHEFDAEVKVPESNTKKHNVDLLRMFGAKSISVKRKEGEQGVV--GVQLRGTDRAW-----FFIPCREQGGRCKQSGGSNGHSGIYPPQSP 462          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 6.540e-63
Identity = 187/522 (35.82%), Postives = 246/522 (47.13%), Query Frame = 1
Query:  349 FIDDSVDKLKPRTGEVLCNLQSKLILMLLFALRKGGVSENQSVLQVASTFKISHSKVRDINNHWWDNNTLLETTGEGRGKVTKNDDGRRRRTQ-----------DQGGPALQVYQRRAQS---RAPNLLPYGGGVFDGALQPKQRGVKPRGRRVAAEARL*AP*GQDQNTPVRCEEARAYSSISR*SGHCERAEDAGLAVLVFMDESLSTRRTVPRIHTFLLTRMGL*RMGWVVRRGRAYA*LWCMRSRSGARWLRVA------PTMTFQSKRVGLSVRKTVGESKGVRTLTWKMRKQQSFRRRPS-----WLRAIITLL*PIRCSWSGLNSALPQLSTLTLSSGATR*FLFSTTPRTIIVSTRKS-------RCRKPITRCTMSTVA*VWSGGNHGEACRCQRHSCGAPLRGTNRTWFFIPRDAG-------RAGGVSREEVALATREFFRLHYPEKLEERVETFMRQKG*ELIWTPPYMPSFQPIELFWQHGKQYVSFNFQLKRKMHELWEEIRKRWGPD 1797
            ++D SV ++KP+ GEV  +LQS+++LMLLF LRK G SEN++VLQVA TFKI H KVR INNHWWD+  L ETT  GRGK+ K DDGRRR T+           D+     QV++R       R  N+            QP  R V     R+  + R     G+ +  P+  E               +RAEDAGLAV+V+MDES   +        F     G+ + G     G+    L  +   +  +W  +A      P      K  G   +K   E         K+ K              WL   +          S   +A+P+                    + I+V    S         + P T      V  +   G   ++ R +R       +G     F +P + G       R GGVSR EVA ATRE+ RL+YPE+LEERV TFM++KG  LIWTPPYMPSFQPIELFWQHGKQYVS NF+LKRKM E+W +IR+ W  D
Sbjct:  117 YMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNME-----------QPSNRSVGGLLSRLGYKRRR----GRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKG---LRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGSGKKKMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRL----------SPAYNAIPEFEG----------------KKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFG--AKSIRVKRKE---GEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGD 589          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 7.810e-63
Identity = 113/161 (70.19%), Postives = 129/161 (80.12%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409
            FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  E G GK+      MEDE+TAEF   AKLAKGDYHAAMTD+MFMEWLE R  PA+NA  EF+  +MILVLDNASYHH FD++VK+PE+N K +NVD
Sbjct:    5 FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVD 156          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.480e-62
Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409
            FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  E G GK+      MEDE+TAEF   AKLAKGDYHAAMTD+MFMEWLE R +PA+NA  EF+  +MILVLDNASYHH FD+EVKVPE+N K +NVD
Sbjct:  158 FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVD 309          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KRM6_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM6_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 3.920e-62
Identity = 115/161 (71.43%), Postives = 129/161 (80.12%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409
            FVHQAHGS YSYFP+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  E G GK+      MEDE+TAE    AKLAKGDYHAAMTD+MFMEWLE R +PA+NA  EF+ N+MILVLDNASYHH FD+EVKVPETN K  NVD
Sbjct:  217 FVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEIMWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAILEFKGNRMILVLDNASYHHGFDAEVKVPETNTKKQNVD 368          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5K987_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K987_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 7.550e-62
Identity = 111/167 (66.47%), Postives = 126/167 (75.45%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENG--RGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVDCCVS 1421
            FVHQAHGSAYSYFP+D+ GVV+DG+GRTTGKGLRMIMVHAITK GPL        FPI EGWFK KEN   + K G  DF M DE+TAEF   AKLA GDYH AMTD MFM+WL+ R TPAF+A  +F++ KM LVLDNASYHH FD EVKVPETN++    + C S
Sbjct:   22 FVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAE--LQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSRSTTSNSCAS 184          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 7.810e-62
Identity = 115/161 (71.43%), Postives = 128/161 (79.50%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409
            FVHQAHGS YSYFPADE+ VV+DG+GRTTGKGLR+IMVHAITKWGPL         PIEEGWFK  E G GK+      MEDE+TAEF   AKLAKGDYHAAMTD+MFMEWLE R +PA+NA  EF+  +MILVLDNASYHH FD+EVKVPETN K +NVD
Sbjct:  170 FVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVG--LPIEEGWFK--ETGSGKR-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVD 321          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.220e-61
Identity = 116/161 (72.05%), Postives = 130/161 (80.75%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409
            FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL      +  PIEEGWFK  E G GK+      MEDE+TAEF   AKLAKGDYHAAMTD+MFMEWLE R +PA+NA  EF+  +MILVLDNASYHH FD+EVKVPETN K +NVD
Sbjct:  275 FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVD 426          
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KUM1_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM1_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 2.180e-61
Identity = 111/161 (68.94%), Postives = 125/161 (77.64%), Query Frame = 3
Query:  927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409
            FVHQAHGS YSYFP+D+NGVV+DG+GRTT KGLRMIMVHAITKW PL      +  PIEEGWFK         GS    M+DE+TAEF   AKLAKGDYHAAMTD+MFMEWLE R +PA+NA  EF+  +MILVLDNASYHH FD+EVKVPETN K +NVD
Sbjct:   58 FVHQAHGSPYSYFPSDKNGVVQDGIGRTTEKGLRMIMVHAITKWEPLAK--FCDGLPIEEGWFKE-------TGSGTKEMKDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGRQMILVLDNASYHHGFDAEVKVPETNTKKHNVD 209          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF49_9PHAE2.980e-7348.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAU4_9PHAE4.640e-6557.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM6_ECTSI6.540e-6335.82DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KHE7_9PHAE7.810e-6370.19DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE1.480e-6271.43DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRM6_9PHAE3.920e-6271.43DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K987_9PHAE7.550e-6266.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKL0_9PHAE7.810e-6271.43DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KIM5_9PHAE1.220e-6172.05DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KUM1_9PHAE2.180e-6168.94DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12045contigH-paniculata_contig12045:552..3085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2053
Cds size363
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12045.1302.1prot_H-paniculata_contig12045.1302.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12045 978..1821 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928921.579921-UTR-H-paniculata_contig12045:551..9771622928921.579921-UTR-H-paniculata_contig12045:551..977Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12045 552..977 +
1691480667.8395872-UTR-H-paniculata_contig12045:551..9771691480667.8395872-UTR-H-paniculata_contig12045:551..977Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12045 552..977 +
1622928921.6304247-UTR-H-paniculata_contig12045:1821..30851622928921.6304247-UTR-H-paniculata_contig12045:1821..3085Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12045 1822..3085 +
1691480667.8688488-UTR-H-paniculata_contig12045:1821..30851691480667.8688488-UTR-H-paniculata_contig12045:1821..3085Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12045 1822..3085 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928921.5974846-CDS-H-paniculata_contig12045:977..10341622928921.5974846-CDS-H-paniculata_contig12045:977..1034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12045 978..1034 +
1691480667.8493164-CDS-H-paniculata_contig12045:977..10341691480667.8493164-CDS-H-paniculata_contig12045:977..1034Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12045 978..1034 +
1622928921.6127172-CDS-H-paniculata_contig12045:1515..18211622928921.6127172-CDS-H-paniculata_contig12045:1515..1821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12045 1516..1821 +
1691480667.8611326-CDS-H-paniculata_contig12045:1515..18211691480667.8611326-CDS-H-paniculata_contig12045:1515..1821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12045 1516..1821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12045.1302.1

>prot_H-paniculata_contig12045.1302.1 ID=prot_H-paniculata_contig12045.1302.1|Name=mRNA_H-paniculata_contig12045.1302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MLLFALRKGGVSENQSVLQVASTFKISHSKVRDINNHWWDNNTLLETTGE
GRGKVTKNDDGRRRRTQDQGGPALQVYQRRAQSRAPNLLPYGGGVFDGAL
QPKQRGVKPRGRRVAAEARL*
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mRNA from alignment at H-paniculata_contig12045:552..3085+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12045.1302.1 ID=mRNA_H-paniculata_contig12045.1302.1|Name=mRNA_H-paniculata_contig12045.1302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2534bp|location=Sequence derived from alignment at H-paniculata_contig12045:552..3085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAAGACGAAGAGCAGGCGCCAACCCACCGGTGGCGCCACTGGCCG CCCGAGCAACGTGGCGAAAAGAGCCAAAACTGGTGCGGCGAGAGATACTC AGGCTCTCGACAGGCTCAGAGTTCAGCTTAAGGAGCAGCAGGCAGCGCTA GCGGCGCTCAAGGCGGAGGTCGAGTCGGGGGAGAAAGCTGTCAAGGCGAA AGAGGCAGCGATTGCCAAGAAGGAGGCAAACAAAGAGCGCGCAAAGCAAC AAGCGAAACAGTAAGCGCACGAACAGCGAGAGCAGAAGTTTGTCGAAGCG GCTGCTCACGCAGCACAGCAGCCGAAGCTTTCACAGGCAGCCCACACCTT CATCGACGACTCTGTAGACAAGCTGAAGCCTCGAACTGGCGAGGTCTTGT GCAATCTCCAGTCGAAGCTGATTCTCATGCTGTTGTTTGCTCTTCGCAAG GGCGGCGTCTCTGAGAATCAATCGGTGCTTCAGGTCAGGACGAGTACAGT CAGCAAGTCTATTTTATATTGATATTACAAGTGTCTGTTTTGTATTACTT AAAGTATGCTGTACAGCAGCAGTTTTTGCGGCATGGTAATTTGAATCATA CGTCTTTTCGCACCCTTTTCGATGTTGCTGTTCATACACCTCTGAGTGTA CAAGGCACTGCTGTCTGTACGGTGCACACTGCTGTCCGCACAGTGCACAC AGCTGCCTGTACGGTTGTGTACTTTCTGTGTGTACCGTACAACAGTGAGT TCGCTGTCTCCCAAATACTCACCAATATACCCACGGCGCGATAACGCTGT TACGAATGGCACCGCATGCGCATTTTCTTCCAAGGATGTACGCTGTTAAA TTTCTGCTCTCTGTTTGCACGGCTTGAGGTGTGCTGTCTTGGCAATTGCA CTGACTCGACTCCCGTATGCCGATGCAATATGCGCTGCGCTCTGGACAAC TGGACGTCTGCCAGGTGGCGAGCACCTTCAAGATCAGCCATTCGAAAGTC AGAGACATCAACAACCACTGGTGGGACAACAACACCCTGTTGGAAACCAC CGGCGAAGGAAGAGGCAAGGTTACCAAGAACGACGACGGCCGACGGCGTC GCACCCAAGATCAGGGAGGACCAGCTTTACAAGTTTATCAACGACGAGCA CAAAGCCGGGCGCCAAATCTTTTGCCGTACGGTGGCGGAGTGTTTGATGG AGCACTGCAACCCAAACAAAGAGGTGTCAAACCGCGCGGTAGGAGGGTTG CTGCAGAGGCTCGGTTATAGGCGCCGTAGGGGCAGGATCAAAACACCCCC GTTAGATGCGAAGAGGCTCGCGCGTATTCCTCTATTTCTCGTTGAAGTGG ACATTGCGAAAGGGCAGAGGATGCGGGGCTGGCAGTTCTCGTGTTCATGG ATGAGAGTTTGTCCACCAGGCGCACGGTTCCGCGTATTCATACTTTCCTG CTGACGAGAATGGGGTTGTAGAGGATGGGATGGGTCGTACGACGGGGAAG GGCTTACGCATGATTATGGTGCATGCGATCACGAAGTGGGGCCCGTTGGT TGCGCGTGGCACCAACAATGACTTTCCAATCGAAGAGGGTTGGTTTAAGC GTAAGGAAAACGGTAGGGGAAAGCAAGGGAGTAAGGACTTTAACATGGAA GATGAGAAAACAGCAGAGTTTCCGTCGTAGGCCAAGTTGGCTAAGGGCGA TTATCACGCTGCTATGACCGATACGATGTTCATGGAGTGGCTTGAACAGC GCTTTACCCCAGCTTTCAACGCTAACTCTGAGTTCAGGAGCAACAAGATG ATTCTTGTTCTCGACAACGCCTCGTACCATCATAGTTTCGACTCGGAAGT CAAGGTGCCGGAAACCAATAACAAGGTGTACAATGTCGACTGTTGCGTAA GTATGGAGCGGGGGTAATCACGGTGAAGCGTGCCGCTGCCAACGGCACAG TTGTGGAGCACCGCTTCGAGGTACCAACAGAACCTGGTTCTTCATTCCCC GAGATGCGGGGCGAGCGGGCGGTGTTAGCAGAGAGGAGGTAGCGTTGGCC ACTCGAGAGTTTTTCCGCCTTCACTACCCTGAAAAGCTTGAGGAGCGGGT GGAGACGTTCATGCGGCAGAAGGGGTAGGAATTGATTTGGACACCGCCTT ACATGCCGTCTTTTCAGCCGATAGAGTTGTTTTGGCAGCATGGTAAGCAG TACGTGAGCTTCAACTTTCAGCTGAAGCGAAAAATGCACGAGTTGTGGGA GGAGATTCGCAAACGTTGGGGACCCGACGTGGCCAGGGCAGGAGGGGGGG TGGAACGCAGCCGATTGTTCCAAGTTGGTGGCGCACGCCATTGGCGAGAT GAACAAGTGGATCAAGGATCGTGATGGACAGCTGCGTGGTACGATAGGTA ACCTTGAAGTTCCACAAGGGTATGATCAGGACGATGTATCACGTGTGAAC GCGGCCGATGATGGGTTGGGGGAGCAGCTTGAACAGGATGACGATGAGTG GGATGTGGGGGACGGCAACGATGAGATTGAGCCA
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Coding sequence (CDS) from alignment at H-paniculata_contig12045:552..3085+

>mRNA_H-paniculata_contig12045.1302.1 ID=mRNA_H-paniculata_contig12045.1302.1|Name=mRNA_H-paniculata_contig12045.1302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig12045:552..3085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGTTGTTTGCTCTTCGCAAGGGCGGCGTCTCTGAGAATCAATCGGT
GCTTCAGATGCTGTTGTTTGCTCTTCGCAAGGGCGGCGTCTCTGAGAATC
AATCGGTGCTTCAGGTGGCGAGCACCTTCAAGATCAGCCATTCGAAAGTC
AGAGACATCAACAACCACTGGTGGGACAACAACACCCTGTTGGAAACCAC
CGGCGAAGGAAGAGGCAAGGTTACCAAGAACGACGACGGCCGACGGCGTC
GCACCCAAGATCAGGGAGGACCAGCTTTACAAGTTTATCAACGACGAGCA
CAAAGCCGGGCGCCAAATCTTTTGCCGTACGGTGGCGGAGTGTTTGATGG
AGCACTGCAACCCAAACAAAGAGGTGTCAAACCGCGCGGTAGGAGGGTTG
CTGCAGAGGCTCGGTTATAGGTGGCGAGCACCTTCAAGATCAGCCATTCG
AAAGTCAGAGACATCAACAACCACTGGTGGGACAACAACACCCTGTTGGA
AACCACCGGCGAAGGAAGAGGCAAGGTTACCAAGAACGACGACGGCCGAC
GGCGTCGCACCCAAGATCAGGGAGGACCAGCTTTACAAGTTTATCAACGA
CGAGCACAAAGCCGGGCGCCAAATCTTTTGCCGTACGGTGGCGGAGTGTT
TGATGGAGCACTGCAACCCAAACAAAGAGGTGTCAAACCGCGCGGTAGGA
GGGTTGCTGCAGAGGCTCGGTTATAG
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