prot_H-paniculata_contig5533.13016.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5533.13016.1
Unique Nameprot_H-paniculata_contig5533.13016.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 121 bits (304), Expect = 1.670e-30
Identity = 65/169 (38.46%), Postives = 98/169 (57.99%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVE-GKVKISAPEGRSGNPT---EYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            D+G +  VLG+ +RRDR  G  T+SQ +Y+   LK +G ++C+ V  P+E GK     P+    NPT   EY+ ++G L Y +T TRPD+   V   ++ +  P  + +   KRV RY+    + G+ F GKS    L G+  ADWA D+D R+ST+GY F++N   +S
Sbjct:   17 DMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDE--NPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVS 183          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 123 bits (308), Expect = 2.450e-30
Identity = 68/174 (39.08%), Postives = 98/174 (56.32%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPV--EGKVKI-----SAPEGRSGNPTEYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            MKD+G   +++GIEV RDR  GT T+SQ  YI   L  YGF     V  P+  +   K+      AP        EY+ M+G LMYA+  TRPDI Y V + ++   +P  +  + CKRVFRYLS   + G+ +G + +G   +G+  AD+A ++DDRKS +GY + L   A +
Sbjct:  112 MKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVRAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYAANLDDRKSISGYAYMLAGAAFA 285          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: A0A8H6XNZ2_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6XNZ2_9AGAR)

HSP 1 Score: 124 bits (311), Expect = 8.390e-30
Identity = 68/173 (39.31%), Postives = 101/173 (58.38%), Query Frame = 0
Query:    2 KDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVEG-----KVKISAPEGRSGNPTEYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRL--KGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            KDLG   +++GIE+RRDR +GT T+SQ  Y+   L  YG  + + +  P++      KV   APE  +    +Y+ ++G LMYA+  TRPDI Y V   ++   +P  + +S CKRV RYLS   + G+ +G  S+ D +   G+  AD+A +VDDRKS +GY F L   A +
Sbjct: 1118 KDLGEPRKIIGIEIRRDRGSGTITLSQLHYVETLLAKYGLTDAKPLATPMDPNVTLRKVPADAPEAPAELRGQYQSIIGGLMYAAICTRPDIAYAVTTLSQYCSNPGPEHWSACKRVLRYLSGTRNYGLVYGNTSDSDEIVSTGYSDADYAANVDDRKSISGYAFMLGGAAYA 1290          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: A0A443S3D3_9ACAR (Integrase core domain protein-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S3D3_9ACAR)

HSP 1 Score: 121 bits (303), Expect = 3.760e-29
Identity = 69/166 (41.57%), Postives = 99/166 (59.64%), Query Frame = 0
Query:    4 LGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVEGKVKISAPEGRSGNPTEYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKD--FSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            +G L+  LG++V R R      V+Q SYI + L  YG  +C+ V  P++  VK++  E +S     YR +VGSLMYA  G+RPDI Y V + A+ +D  C+ +  ++  KRV RYL   P  GITF   S+   L G+  AD+A D+D R+ST+GY F L+  A+S
Sbjct:  330 VGKLNSFLGLQVIRHRKEKLLNVNQESYIQKMLNKYGMTDCKSVKTPMDATVKLTKSESKSCE-FSYRELVGSLMYAMLGSRPDICYAVGKLAQFLD--CYDETHWTAAKRVLRYLKGTPKHGITFNANSSSPNLYGYCDADYAGDLDSRRSTSGYIFILSGGAVS 492          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: UPI0009054F90 (uncharacterized protein LOC109242106 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI0009054F90)

HSP 1 Score: 114 bits (286), Expect = 1.200e-28
Identity = 70/168 (41.67%), Postives = 96/168 (57.14%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVEGKVKISAP-EGRSGNPTEYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            M D+G +S  LGI+V++ R +G   +SQG Y  E LK +  D C  V  PVE  VKIS   +G + NPT ++ +VGSL Y  T TRPDI Y V   +R ++ P        KR+ RY+    D GI +   S   +  G+  +DWA D+DDRKSTTG+ F L + A +
Sbjct:    7 MTDIGLMSYYLGIQVQQ-RKDGIF-ISQGEYAKEILKKFEMDNCNPVSTPVECGVKISKHGDGENVNPTFFKSLVGSLRYL-TCTRPDILYGVGLVSRFMEAPTTSHLKVAKRILRYIKDTLDYGILYSS-SKDSKFVGYCDSDWAGDIDDRKSTTGFVFFLGNSAFT 170          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 116 bits (291), Expect = 1.490e-28
Identity = 66/169 (39.05%), Postives = 98/169 (57.99%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVEGKVKISAP-EGRSGNPT-EYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            +K+LG L   LGIE+ R+R + T  ++Q +YI    + +G ++C+ V  P +   K+  P E     P   YR +VG+LMY +T TRPDI   V + A+  +      +   KR+ +YL T  D+G+ F G + G+ L G+  A+WA D+D R+STTGY F LN  AIS
Sbjct:   23 IKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAIS 190          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: A0A090BBM5_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090BBM5_HYAAE)

HSP 1 Score: 115 bits (289), Expect = 2.930e-28
Identity = 66/169 (39.05%), Postives = 96/169 (56.80%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVEGKVKISA-PEGRSGNPT-EYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            +KDLG L   LGIE+ R R      ++Q +YI    + +G D C+ V  P +   K++  P+     P   YR +VG+LMY +T TRPDI + V + A+  +      ++  KR+ +YL T  D+ I F G + G+ L+ F  A+WA D+D R+STTGY F LN  AIS
Sbjct:   23 IKDLGDLKYCLGIEIHRKRDERIIKMNQRAYIKRLAEKFGVDNCKDVHTPADSNAKLAKMPDEEVFVPKFPYRELVGALMYITTCTRPDIAHAVGEVAKYCERYNKSHWTAAKRIIKYLKTTQDMSIVFSGFNKGELLR-FADANWAGDLDTRRSTTGYVFFLNGSAIS 190          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: A0A2I0WQZ2_9ASPA (Putative mitochondrial protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WQZ2_9ASPA)

HSP 1 Score: 112 bits (280), Expect = 3.070e-28
Identity = 66/168 (39.29%), Postives = 93/168 (55.36%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVEGKVKISA-PEGRSGNPTEYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            M D+G ++  LGIEV +        +SQ SY  + LK +  D C+ +  P+E  VK+S   EG   +PT ++ +VGSL Y  T TRPDI Y V   +R ++ P      T KR+ RY+      G+ +   SN  RL G+  +DWA D+DDRKSTTGY F + D   +
Sbjct:    1 MTDIGLMAYYLGIEVHQ--IEDEIFISQESYAKKMLKKFKMDNCKPINTPIECGVKLSKHDEGERVDPTFFKSLVGSLRYL-TCTRPDILYAVGLVSRYMETPTTSHLKTAKRILRYIKGTIHFGLLYSS-SNDFRLVGYSDSDWAGDMDDRKSTTGYVFFMGDTTFT 164          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 119 bits (299), Expect = 3.380e-28
Identity = 67/169 (39.64%), Postives = 99/169 (58.58%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPVEGKVKISAP-EGRSGNPT-EYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            +K+LG L   LGIE+ R+R + T  ++Q +YI    + +G ++C+ V  P +   K+  P E     P   YR +VG+LMY +T TRPDI   V + A+  +      +   KR+ +YL T PD+G+ F G + G+ L G+  A+WA D+D R+STTGY F LN  AIS
Sbjct:  888 IKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAIS 1055          
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 118 bits (296), Expect = 8.730e-28
Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIPV---EGKVKISAPEGRSGNPTEYRGMVGSLMYASTGTRPDIEYEVHQAARRVDDPCWKDFSTCKRVFRYLSTVPDVGITFGGK---SNGDRLKGFVTADWAEDVDDRKSTTGYDFKLNDVAIS 167
            M DLG    +LG+E+  DR   T T+SQ  Y+   LK +G   C+ V  P+   +  +K++ PE    +   Y+  +GSLMYA  GTRPD+ + V   ++    P    ++   RV++YL    D  + F G    S G  L G+  ADWA DV+DR+S TG+ FKL D AIS
Sbjct: 1186 MSDLGEARWILGMEIIHDRARKTITLSQHQYVENILKTHGMANCRPVSTPMAPNQKLLKLNVPEV---DERAYQSALGSLMYAMLGTRPDLAFAVGMLSKHAASPGKDHWTALMRVYKYLRGTSDHALVFDGSALCSEGGNLVGYSNADWAGDVNDRRSVTGFIFKLGDAAIS 1355          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5533.13016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT1.670e-3038.46Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A146H7K8_MYCCL2.450e-3039.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H6XNZ2_9AGAR8.390e-3039.31Uncharacterized protein n=1 Tax=Mycena sanguinolen... [more]
A0A443S3D3_9ACAR3.760e-2941.57Integrase core domain protein-like protein (Fragme... [more]
UPI0009054F901.200e-2841.67uncharacterized protein LOC109242106 n=1 Tax=Nicot... [more]
H3GB69_PHYRM1.490e-2839.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A090BBM5_HYAAE2.930e-2839.05RxLR effector candidate protein n=1 Tax=Hyaloperon... [more]
A0A2I0WQZ2_9ASPA3.070e-2839.29Putative mitochondrial protein n=1 Tax=Dendrobium ... [more]
H3H7M7_PHYRM3.380e-2839.64CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A060SSE0_PYCCI8.730e-2838.15Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 43..163
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 43..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5533contigH-paniculata_contig5533:11350..11934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5533.13016.1mRNA_H-paniculata_contig5533.13016.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5533 11350..11934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5533.13016.1 ID=prot_H-paniculata_contig5533.13016.1|Name=mRNA_H-paniculata_contig5533.13016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MKDLGSLSRVLGIEVRRDRCNGTTTVSQGSYILEELKIYGFDECQGVPIP
VEGKVKISAPEGRSGNPTEYRGMVGSLMYASTGTRPDIEYEVHQAARRVD
DPCWKDFSTCKRVFRYLSTVPDVGITFGGKSNGDRLKGFVTADWAEDVDD
RKSTTGYDFKLNDVAIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like