mRNA_H-paniculata_contig12045.1302.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF49_9PHAE) HSP 1 Score: 255 bits (652), Expect = 2.980e-73 Identity = 159/329 (48.33%), Postives = 194/329 (58.97%), Query Frame = 3 Query: 432 VVCSSQGRRL*ESIGASGGEHLQDQPFESQRHQQPLVGQQHPVGNHRRRKRQGYQERRRPTASHPRSG---RTSFTSLSTTSTKPGAKSFAVRWRSV*WSTATQTKRCQTAR*EGCCRGSVIGAVGAGSKHPR*MRRGSRVFLYFSLKWTLRKGRGCGAGSSRVHG*EFVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409 + G+ E+I GEH+QD+P E Q QQPLVG V +H R +RQ ++E R H G + S S+ ++ G K R +T R AR R V + ++ G V +Y FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL + FPIEEGWFK K G+GK+G KDFN+EDE+TAEF AKLAKGDYHAAMTD+MFMEWLE+R +PA+NA +F+ KMILV DNASYH FD+EVKVPETN K YNV+ Sbjct: 146 ISLRKDGQSENEAILRVSGEHIQDRPREGQTRQQPLVGTPRVVRDHLRGERQDHEEGRPAALCHRTCGFEEQPSNRSVGGLLSRLGYKRRRGR---------IKTPRLDAARLARIRRFLVEMDIAKRAEDA-----GLAVIVYMDES--------------------FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGFPIEEGWFKSKGGGKGKRGGKDFNLEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLERRLSPAYNAVPDFKGKKMILVRDNASYHQGFDAEVKVPETNTKKYNVE 438
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE) HSP 1 Score: 231 bits (590), Expect = 4.640e-65 Identity = 133/231 (57.58%), Postives = 152/231 (65.80%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVDCC-------VSMERG*SR*SVPLPTAQLWSTASRYQQNLVLHSPRCGASGRC*QRGGSVGHSRVFPPSLP 1598 FVHQAHGS SYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL FPIEEGWFK E G GK+ MEDE+TAEF KLAKGD HAAMTD+MFMEWLE R PA+NA EF+ +MILVLDNASYHH FD+EVKVPE+N K +NVD +S++R V QL T + P GRC Q GGS GHS ++PP P Sbjct: 248 FVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCYG--FPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHEFDAEVKVPESNTKKHNVDLLRMFGAKSISVKRKEGEQGVV--GVQLRGTDRAW-----FFIPCREQGGRCKQSGGSNGHSGIYPPQSP 462
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 231 bits (589), Expect = 6.540e-63 Identity = 187/522 (35.82%), Postives = 246/522 (47.13%), Query Frame = 1 Query: 349 FIDDSVDKLKPRTGEVLCNLQSKLILMLLFALRKGGVSENQSVLQVASTFKISHSKVRDINNHWWDNNTLLETTGEGRGKVTKNDDGRRRRTQ-----------DQGGPALQVYQRRAQS---RAPNLLPYGGGVFDGALQPKQRGVKPRGRRVAAEARL*AP*GQDQNTPVRCEEARAYSSISR*SGHCERAEDAGLAVLVFMDESLSTRRTVPRIHTFLLTRMGL*RMGWVVRRGRAYA*LWCMRSRSGARWLRVA------PTMTFQSKRVGLSVRKTVGESKGVRTLTWKMRKQQSFRRRPS-----WLRAIITLL*PIRCSWSGLNSALPQLSTLTLSSGATR*FLFSTTPRTIIVSTRKS-------RCRKPITRCTMSTVA*VWSGGNHGEACRCQRHSCGAPLRGTNRTWFFIPRDAG-------RAGGVSREEVALATREFFRLHYPEKLEERVETFMRQKG*ELIWTPPYMPSFQPIELFWQHGKQYVSFNFQLKRKMHELWEEIRKRWGPD 1797 ++D SV ++KP+ GEV +LQS+++LMLLF LRK G SEN++VLQVA TFKI H KVR INNHWWD+ L ETT GRGK+ K DDGRRR T+ D+ QV++R R N+ QP R V R+ + R G+ + P+ E +RAEDAGLAV+V+MDES + F G+ + G G+ L + + +W +A P K G +K E K+ K WL + S +A+P+ + I+V S + P T V + G ++ R +R +G F +P + G R GGVSR EVA ATRE+ RL+YPE+LEERV TFM++KG LIWTPPYMPSFQPIELFWQHGKQYVS NF+LKRKM E+W +IR+ W D Sbjct: 117 YMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNME-----------QPSNRSVGGLLSRLGYKRRR----GRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKG---LRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGSGKKKMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRL----------SPAYNAIPEFEG----------------KKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFG--AKSIRVKRKE---GEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGD 589
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 223 bits (567), Expect = 7.810e-63 Identity = 113/161 (70.19%), Postives = 129/161 (80.12%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409 FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL + PIEEGWFK E G GK+ MEDE+TAEF AKLAKGDYHAAMTD+MFMEWLE R PA+NA EF+ +MILVLDNASYHH FD++VK+PE+N K +NVD Sbjct: 5 FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVD 156
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 225 bits (574), Expect = 1.480e-62 Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409 FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL + PIEEGWFK E G GK+ MEDE+TAEF AKLAKGDYHAAMTD+MFMEWLE R +PA+NA EF+ +MILVLDNASYHH FD+EVKVPE+N K +NVD Sbjct: 158 FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVD 309
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KRM6_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM6_9PHAE) HSP 1 Score: 224 bits (572), Expect = 3.920e-62 Identity = 115/161 (71.43%), Postives = 129/161 (80.12%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409 FVHQAHGS YSYFP+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL + PIEEGWFK E G GK+ MEDE+TAE AKLAKGDYHAAMTD+MFMEWLE R +PA+NA EF+ N+MILVLDNASYHH FD+EVKVPETN K NVD Sbjct: 217 FVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEIMWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAILEFKGNRMILVLDNASYHHGFDAEVKVPETNTKKQNVD 368
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5K987_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K987_9PHAE) HSP 1 Score: 214 bits (544), Expect = 7.550e-62 Identity = 111/167 (66.47%), Postives = 126/167 (75.45%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENG--RGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVDCCVS 1421 FVHQAHGSAYSYFP+D+ GVV+DG+GRTTGKGLRMIMVHAITK GPL FPI EGWFK KEN + K G DF M DE+TAEF AKLA GDYH AMTD MFM+WL+ R TPAF+A +F++ KM LVLDNASYHH FD EVKVPETN++ + C S Sbjct: 22 FVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAE--LQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSRSTTSNSCAS 184
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 223 bits (568), Expect = 7.810e-62 Identity = 115/161 (71.43%), Postives = 128/161 (79.50%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409 FVHQAHGS YSYFPADE+ VV+DG+GRTTGKGLR+IMVHAITKWGPL PIEEGWFK E G GK+ MEDE+TAEF AKLAKGDYHAAMTD+MFMEWLE R +PA+NA EF+ +MILVLDNASYHH FD+EVKVPETN K +NVD Sbjct: 170 FVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVG--LPIEEGWFK--ETGSGKR-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVD 321
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.220e-61 Identity = 116/161 (72.05%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409 FVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL + PIEEGWFK E G GK+ MEDE+TAEF AKLAKGDYHAAMTD+MFMEWLE R +PA+NA EF+ +MILVLDNASYHH FD+EVKVPETN K +NVD Sbjct: 275 FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVD 426
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Match: A0A6H5KUM1_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM1_9PHAE) HSP 1 Score: 218 bits (554), Expect = 2.180e-61 Identity = 111/161 (68.94%), Postives = 125/161 (77.64%), Query Frame = 3 Query: 927 FVHQAHGSAYSYFPADENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNNDFPIEEGWFKRKENGRGKQGSKDFNMEDEKTAEFPS*AKLAKGDYHAAMTDTMFMEWLEQRFTPAFNANSEFRSNKMILVLDNASYHHSFDSEVKVPETNNKVYNVD 1409 FVHQAHGS YSYFP+D+NGVV+DG+GRTT KGLRMIMVHAITKW PL + PIEEGWFK GS M+DE+TAEF AKLAKGDYHAAMTD+MFMEWLE R +PA+NA EF+ +MILVLDNASYHH FD+EVKVPETN K +NVD Sbjct: 58 FVHQAHGSPYSYFPSDKNGVVQDGIGRTTEKGLRMIMVHAITKWEPLAK--FCDGLPIEEGWFKE-------TGSGTKEMKDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGRQMILVLDNASYHHGFDAEVKVPETNTKKHNVD 209 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12045.1302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12045.1302.1 >prot_H-paniculata_contig12045.1302.1 ID=prot_H-paniculata_contig12045.1302.1|Name=mRNA_H-paniculata_contig12045.1302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MLLFALRKGGVSENQSVLQVASTFKISHSKVRDINNHWWDNNTLLETTGEback to top mRNA from alignment at H-paniculata_contig12045:552..3085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12045.1302.1 ID=mRNA_H-paniculata_contig12045.1302.1|Name=mRNA_H-paniculata_contig12045.1302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2534bp|location=Sequence derived from alignment at H-paniculata_contig12045:552..3085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12045:552..3085+ >mRNA_H-paniculata_contig12045.1302.1 ID=mRNA_H-paniculata_contig12045.1302.1|Name=mRNA_H-paniculata_contig12045.1302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig12045:552..3085+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |