mRNA_H-paniculata_contig55318.13015.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig55318.13015.1
Unique NamemRNA_H-paniculata_contig55318.13015.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A2N9H4X0_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H4X0_FAGSY)

HSP 1 Score: 112 bits (280), Expect = 2.460e-24
Identity = 80/289 (27.68%), Postives = 134/289 (46.37%), Query Frame = 1
Query:    1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKH-KMAPRGEKCIMLGISHN---------HPSGTVRVLNVKTGQVVQRQSVS-------WHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPV-------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            TPYE W G   +LEHL+P+G++G++H    K+ K+ PR  K I +  S           HP+G +  +  +    ++    S         L   E  EG   ++  G GLV R   D     Q    S R      +    E+ G + +       EP +  E   SP+ + W    + +M  + +N VW  VD P  +  +    + + K   DG +++Y+ RLVA    Q + I +++  SP    AS +++LS+ A HD EL  +D++ A+L   +D++I++  P
Sbjct:  438 TPYELWKGEKPNLEHLRPWGSIGFVHSTAHKYGKLGPRARKHIFIRYSDRLKGYVMYGEHPNGGMTEIESRDIDFIETDFPSIGDANRDLDLYELEEDEGTLPSSSEGGGLVPRPYQD----SQARRVSNRGHIPRRH---FEIEGNVLLCDAKDVDEPASFSEALHSPDRDEWMTVMQEEMSSMDKNNVWELVDLPPGRKTIGNKCVLKVKRKADGSIDRYKARLVAKCYIQREGIDYEDTFSPVVRFASIRLILSIVAKHDLELFQMDVKTAFLNGELDEEIYMAQP 719          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A5N6PYG1_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PYG1_9ASTR)

HSP 1 Score: 110 bits (276), Expect = 8.450e-24
Identity = 75/282 (26.60%), Postives = 132/282 (46.81%), Query Frame = 1
Query:    1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHN-------HPSGTVRVLNVKTGQVVQRQSVSWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELP----------VEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            TPYE WYG   +L +L+ +G   Y+ K  T +K+ PRGEK I +G           HP+   +V   +    ++   +S  ++   N +   +      G  +R +    T +           T        +R E             EP N +   +  E + W +A +V+MQ + +N VW  VD P N   V +  I+++K   DG V  ++ RLVA G  Q + I ++E  SP     S ++++++AA HD+E+  +D++ A+L   +++D+++  P
Sbjct:  664 TPYELWYGRKPNLSYLRVWGCEAYV-KRETSNKLDPRGEKVIFVGYPKETKAYYFYHPTDK-KVFIARRAIFLEEDFLSKGMDG-NNVDLDEIQDSHNAGPEVRTIDQQITVEPEPCLVQAPIVTHDVRRSERIRREPERFDDIYLVDQSEPTNYKSASSDKESDKWLKAMDVEMQSMYDNQVWDLVDLPSNSKAVGSKWIFKKKTDMDGNVHTFKARLVAKGFTQTQGIDYEETFSPVAMTKSIRILIAIAAYHDYEIWQMDVKTAFLNGHLNEDVYMVQP 942          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A5N6N120_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6N120_9ASTR)

HSP 1 Score: 110 bits (275), Expect = 1.110e-23
Identity = 76/265 (28.68%), Postives = 132/265 (49.81%), Query Frame = 1
Query:    1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQVVQRQSVSWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPVEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            TPYE WYG   +L +L+ +G   Y+ K  T +K+ P+GEK    G+  N         NV   +V    +V   +E+ + Q    +T E  P LV   +  +   +   +   RR     +    ++      EP N +   +  E + W +A +V+MQ + +N VW  VD P N   V +  I+++K   DG V  ++ RLVA G  Q + I  +E  SP     S ++++++AA HD+E+  +D++ A+L   +++D+++  P
Sbjct:  399 TPYELWYGRKPNLSYLRVWGCEAYV-KRETSNKLDPKGEK----GMDGN---------NVDLDEVQDSLNVGPEVETIDQQ----ITVEPEPCLVQAPIVTHDVRRSERI---RREPERFD----DIYLVDQSEPTNYKSATSDIESDKWLKAMDVEMQSMYDNQVWDLVDLPPNSKAVGSKWIFKKKTDMDGNVHTFKARLVAKGFTQTQEIDNEETFSPVAMTKSIRILIAIAAYHDYEIWQMDVKTAFLNGHLNEDVYMVQP 638          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A401GTF6_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GTF6_9APHY)

HSP 1 Score: 107 bits (268), Expect = 1.000e-22
Identity = 57/177 (32.20%), Postives = 98/177 (55.37%), Query Frame = 1
Query:  304 YFTGQQPSVFSTRRSGTSANNGDSELRGELPV-------------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            Y  G QP       + T  ++ DSE   + P+             EP +  E   SP+W  WQ+A E +MQ L ++  +  V+ P+N  +V +  I+  K+  +G++E Y+ RLVA G  Q+  + F +  +P   +AS +++L+LAA HDW++  +D++ AYL A +++DIF++ P
Sbjct:  883 YPKGLQPGDLMGATAMTVEDSEDSESEEDEPIFAMPAAFAVHEGQEPRSLEEAMQSPDWPQWQQAIEKEMQNLRDHHTYDLVEPPENTNIVGSKFIFRIKHNANGEIESYKARLVAQGFTQVPGVDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNAELEEDIFMKQP 1059          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A8J5Z9A0_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z9A0_9ROSI)

HSP 1 Score: 107 bits (267), Expect = 1.260e-22
Identity = 70/265 (26.42%), Postives = 123/265 (46.42%), Query Frame = 1
Query:    1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQVVQRQSVSWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPVEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            TPYE W G + S+  ++ +G   Y+ K  T  K+ P+ E+CI +G         + +  ++  Q      +    + P+  E      ET P    R L +    ++     T        + D         EP   +E  ASP+ E W  A   +M  + EN VWT +D P+    +    ++++K   DG V+ Y  +LVA   RQI  + + E  SP     S +++L++AA HD+E+  +D++ A+L   +++D+++  P
Sbjct:  436 TPYEMWTGKSPSMSFMKIWGYEAYV-KRQTSTKLEPKSERCIFVGKGSGRK---IELEEIRESQDATEPEIKQQ-QIPQEIEEEVTVVETQP--PRRSLRERHAPERYGFLITTHGDILLIDQD---------EPRTYQEAVASPDSEKWLEAMRSEMDSMYENQVWTLIDPPEGVKPIGCKWVFKKKTDMDGNVQTYNGQLVAKVFRQIHGVDYDETFSPVAMFKSIRILLAIAAFHDYEIWQMDVKTAFLNGKLEEDVYMTQP 684          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 106 bits (264), Expect = 3.420e-22
Identity = 58/177 (32.77%), Postives = 96/177 (54.24%), Query Frame = 1
Query:  304 YFTGQQPSVFSTRRSGTSANNGDSELRGELPV-------------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            Y  G QP       +   A   +SE  G+ P+             EP +  E   SP+W  WQ+A E +M+ L ++  +  V+ P+N  VV +  ++  K   +GK+E Y+ RLVA G  QI  I F +  +P   +AS +++L+LAA HDW++  +D++ AYL A ++++IF++ P
Sbjct:  915 YPQGLQPGDLMGA-AAVEAEESESEQEGDEPIFAMPAAFAVREGQEPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQP 1090          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 105 bits (263), Expect = 4.630e-22
Identity = 55/191 (28.80%), Postives = 107/191 (56.02%), Query Frame = 1
Query:  223 LESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPVEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            LE  E++EGGG    T  G++ +      TG  P   +   +  +A  GD          P +  +  +  +   W++A E +++   + GV+ +V RP+++ ++ +  +++ K G DG+VEKY+ RLVA G  Q++ I + E  +P     S +++L+LAA HDWE+  +D++ A+L   ++++I++++P
Sbjct:  949 LEGEESEEGGGDVGSTDTGIMEKS----DTGVTPVTTTADEAANAAVLGD----------PLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVP 1125          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A2Z6MHE6_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MHE6_TRISU)

HSP 1 Score: 105 bits (261), Expect = 8.110e-22
Identity = 81/288 (28.12%), Postives = 135/288 (46.88%), Query Frame = 1
Query:    1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKH-KMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQVVQRQSV------SWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQ-QPSVFSTRRSGTSANNGDSELRGELPV---------------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            TP E W GN  S++HL+ FG++ Y H    K  K+  + EK +++G     P+G  ++ + K+ +VV  + V       W+  + +N     L  E  P  V  +     TG  Q    STR    S    D E   +  V               EP N  E  A P+W    + E   +  + +N  W  V+ P +K  +S   +++ K   DG + K++ RLVA G  Q + I F E  +P   M + ++V+++A+  DW L H+D++ A+L  P+ ++++V  P
Sbjct:  463 TPEEMWTGNKPSVKHLRIFGSLCYRHIPDEKRRKLDDKSEKLVLIGYD---PTGAYKMYDPKSQKVVISRDVVVDEKSQWNWNASKNIVQMQLDDE--PHTVDNRNDIQDTGDTQEGRRSTRTRFPSVRLNDHETITDDAVNDDGDLVHLAFMADSEPINWNEAVACPKWNQAMKDE---LLSIEKNHTWKLVELPPHKKAISVKWVFKLKKNPDGSIVKHKARLVARGFLQQQGIDFTEFYAPVARMETIRLVVAIASSFDWPLFHMDVKSAFLNGPLQEEVYVSQP 742          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A8J5YUK5_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YUK5_9ROSI)

HSP 1 Score: 104 bits (259), Expect = 1.470e-21
Identity = 79/286 (27.62%), Postives = 131/286 (45.80%), Query Frame = 1
Query:    1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHN-------HPSGTVRVLNVKTGQVVQRQSV-----SWHLESPENQEGGGLTA-----ETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPV----EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            TPYE W     S+  ++ +G   Y+ K  T  K+ P+ E+CI  G           +P+   +VL  +TG  ++R+ V        +E  E QE    T      +  P  +  Q+T   T Q P  +   R             G++ +    EP   +E  A P+ E W  A   +M  + EN VWT VD P+    +    ++++K   DG V+ Y+ RLV  G RQI  + + E  SP       +++L +AA HD+E+  +D++ A+L   +++D+ +  P
Sbjct:  376 TPYEMWTRKRPSMSFMKIWGYKAYV-KRQTFTKLEPKSERCIFAGYLKETKGYYFFNPTEN-KVLVARTGVFLEREFVFRKGSGRKIELEEIQESQDTTEPEIKQQQIPQEIEEQVTAVET-QPPRRYLRERHALERYGFLITTHGDILLIDQDEPRTYQEAVAIPDSEKWLEAMRTEMDSMYENQVWTLVDPPEGVKPIGCKWVFKKKTNMDGNVQTYKGRLVTKGFRQIHGVDYDETFSPVAMFKFIRILLDIAAFHDYEIWQMDVKTAFLNGKLEEDVCMTQP 658          
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A015J5I9_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J5I9_RHIIW)

HSP 1 Score: 104 bits (259), Expect = 1.530e-21
Identity = 75/292 (25.68%), Postives = 137/292 (46.92%), Query Frame = 1
Query:    1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQ---VVQRQSVSWHLESPENQEGGGLT-----AETGPGLVLRQLTDYFTGQQPS-----VFSTRRSGTSA-----------NNGDSELRGELPV---EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
            TP+E W G   SL H++ +G   ++ +  T+ K+A R E+C  LG    +P  +   L  +  +    V R++V    E    ++ G         E+     L + ++    + P          RRSG  +           ++GD+ +     +   EP N +E  A PE   W+ A + +++ + +N VW  VD    +  V    I+++K   DGKV  ++ RLVA G  Q   + + E  SP   + S +++L++AA HD+E+  +D++ A+L   + +D+++  P
Sbjct:  622 TPHEMWTGKVPSLAHIKVWGCEAFVRRE-TQDKLAERSERCFFLG----YPKQSFGYLFYRPSEDVVFVARRAVFRERELIFKEDSGSTIDLEEIQESSDDATLGETSNQHEEEVPVGPTDVSLPLRRSGRVSMPPEFYGFHITSDGDTFVSDRTLINLDEPANYQEAVAGPESAKWKEAMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQP 908          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N9H4X0_FAGSY2.460e-2427.68Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A5N6PYG1_9ASTR8.450e-2426.60Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A5N6N120_9ASTR1.110e-2328.68Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A401GTF6_9APHY1.000e-2232.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5Z9A0_9ROSI1.260e-2226.42Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GQU1_9APHY3.420e-2232.77Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A0C2WN23_AMAMK4.630e-2228.80Integrase catalytic domain-containing protein (Fra... [more]
A0A2Z6MHE6_TRISU8.110e-2228.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YUK5_9ROSI1.470e-2127.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A015J5I9_RHIIW1.530e-2125.68Gag-pol fusion protein n=1 Tax=Rhizophagus irregul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55318contigH-paniculata_contig55318:189..1106 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score110.5
Seed ortholog evalue1.2e-21
Seed eggNOG ortholog4538.ORGLA03G0406500.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37YYP@33090,3GQD7@35493,3IKKZ@38820,3M3FD@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons2
Model size801
Cds size801
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930579.9307277-CDS-H-paniculata_contig55318:188..6131622930579.9307277-CDS-H-paniculata_contig55318:188..613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig55318 189..613 -
1691481357.1750243-CDS-H-paniculata_contig55318:188..6131691481357.1750243-CDS-H-paniculata_contig55318:188..613Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig55318 189..613 -
1622930579.9502363-CDS-H-paniculata_contig55318:730..11061622930579.9502363-CDS-H-paniculata_contig55318:730..1106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig55318 731..1106 -
1691481357.1865897-CDS-H-paniculata_contig55318:730..11061691481357.1865897-CDS-H-paniculata_contig55318:730..1106Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig55318 731..1106 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55318.13015.1prot_H-paniculata_contig55318.13015.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig55318 189..1106 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig55318.13015.1

>prot_H-paniculata_contig55318.13015.1 ID=prot_H-paniculata_contig55318.13015.1|Name=mRNA_H-paniculata_contig55318.13015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=267bp
TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNH
PSGTVRVLNVKTGQVVQRQSVSWHLESPENQEGGGLTAETGPGLVLRQLT
DYFTGQQPSVFSTRRSGTSANNGDSELRGELPVEPNNRRETQASPEWEHW
QRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRC
RLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQA
YLQAPIDQDIFVEIPV*
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mRNA from alignment at H-paniculata_contig55318:189..1106-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig55318.13015.1 ID=mRNA_H-paniculata_contig55318.13015.1|Name=mRNA_H-paniculata_contig55318.13015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=918bp|location=Sequence derived from alignment at H-paniculata_contig55318:189..1106- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCCGTACGAGAAGTGGTACGGGAATACAGCATCGCTGGAACACCTACA ACCTTTTGGGACGGTGGGTTACATGCACAAGATCATCACGAAACACAAGA TGGCGCCACGCGGAGAGAAGTGCATCATGCTGGGTATTTCCCACAACCAC CCAAGCGGAACTGTCCGCGTTCTGAACGTCAAGACAGGGCAGGTCGTCCA ACGTCAGAGCGTTTCATGGCACCTCGAGAGTCCAGAAAACCAGGAGGGCG GTGGCCTCACCGCAGAGACCGGGCCTGGCCTCGTGCTGCGCCAGCTAACC GACTATTTCACGGGGCAGCAACCCTCCGTTTTCTCTACGCGTAGAAGCGG CACGAGCGCCAACAACGGCGATAGCGGTGGAGCCGCACTAGAAAGCATCA TCACGGGCGACATTGACCTCGACAACGAGGAATTTATGGCTTACCACGAA GGCGATATCATGGCGATGCAGGTCGCACTGGCGATGCCCGAAGAACTGAG GGGTGAACTCCCTGTGGAACCCAATAATCGCCGGGAGACGCAGGCGTCGC CGGAGTGGGAACACTGGCAAAGAGCGGAGGAAGTCAAGATGCAAGGCCTC ATCGAAAACGGGGTTTGGACGCAAGTGGATCGCCCGAAGAATAAGCTGGT CGTGAGCACGATGATGATCTACGAAAGGAAAAACGGCGAGGACGGAAAAG TGGAGAAATATAGGTGCCGCCTGGTCGCCCACGGGAACCGTCAGATCAAG AGCATCCACTTCCAGGAAGCTTCGTCCCCTGCACCGGCAATGGCCAGCAC AAAAATGGTGTTGTCGCTTGCGGCAATCCATGACTGGGAGCTTCGGCACG TCGACATTGAACAAGCGTACCTGCAGGCGCCCATTGACCAGGATATTTTC GTCGAAATTCCCGTATAA
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Coding sequence (CDS) from alignment at H-paniculata_contig55318:189..1106-

>mRNA_H-paniculata_contig55318.13015.1 ID=mRNA_H-paniculata_contig55318.13015.1|Name=mRNA_H-paniculata_contig55318.13015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1602bp|location=Sequence derived from alignment at H-paniculata_contig55318:189..1106- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCCCGTACGAGAAGTGGTACGGGAATACAGCATCGCTGGAACACCTACA
ACCTTTTGGGACGGTGGGTTACATGCACAAGATCATCACGAAACACAAGA
TGGCGCCACGCGGAGAGAAGTGCATCATGCTGGGTATTTCCCACAACCAC
CCAAGCGGAACTGTCCGCGTTCTGAACGTCAAGACAGGGCAGGTCGTCCA
ACGTCAGAGCGTTTCATGGCACCTCGAGAGTCCAGAAAACCAGGAGGGCG
GTGGCCTCACCGCAGAGACCGGGCCTGGCCTCGTGCTGCGCCAGCTAACC
GACTATTTCACGGGGCAGCAACCCTCCGTTTTCTCTACGCGTAGAAGCGG
CACGAGCGCCAACAACGGCGATAGCGACCCCGTACGAGAAGTGGTACGGG
AATACAGCATCGCTGGAACACCTACAACCTTTTGGGACGGTGGGTTACAT
GCACAAGATCATCACGAAACACAAGATGGCGCCACGCGGAGAGAAGTGCA
TCATGCTGGGTATTTCCCACAACCACCCAAGCGGAACTGTCCGCGTTCTG
AACGTCAAGACAGGGCAGGTCGTCCAACGTCAGAGCGTTTCATGGCACCT
CGAGAGTCCAGAAAACCAGGAGGGCGGTGGCCTCACCGCAGAGACCGGGC
CTGGCCTCGTGCTGCGCCAGCTAACCGACTATTTCACGGGGCAGCAACCC
TCCGTTTTCTCTACGCGTAGAAGCGGCACGAGCGCCAACAACGGCGATAG
CGAACTGAGGGGTGAACTCCCTGTGGAACCCAATAATCGCCGGGAGACGC
AGGCGTCGCCGGAGTGGGAACACTGGCAAAGAGCGGAGGAAGTCAAGATG
CAAGGCCTCATCGAAAACGGGGTTTGGACGCAAGTGGATCGCCCGAAGAA
TAAGCTGGTCGTGAGCACGATGATGATCTACGAAAGGAAAAACGGCGAGG
ACGGAAAAGTGGAGAAATATAGGTGCCGCCTGGTCGCCCACGGGAACCGT
CAGATCAAGAGCATCCACTTCCAGGAAGCTTCGTCCCCTGCACCGGCAAT
GGCCAGCACAAAAATGGTGTTGTCGCTTGCGGCAATCCATGACTGGGAGC
TTCGGCACGTCGACATTGAACAAGCGTACCTGCAGGCGCCCATTGACCAG
GATATTTTCGTCGAAATTCCCGTATAAAACTGAGGGGTGAACTCCCTGTG
GAACCCAATAATCGCCGGGAGACGCAGGCGTCGCCGGAGTGGGAACACTG
GCAAAGAGCGGAGGAAGTCAAGATGCAAGGCCTCATCGAAAACGGGGTTT
GGACGCAAGTGGATCGCCCGAAGAATAAGCTGGTCGTGAGCACGATGATG
ATCTACGAAAGGAAAAACGGCGAGGACGGAAAAGTGGAGAAATATAGGTG
CCGCCTGGTCGCCCACGGGAACCGTCAGATCAAGAGCATCCACTTCCAGG
AAGCTTCGTCCCCTGCACCGGCAATGGCCAGCACAAAAATGGTGTTGTCG
CTTGCGGCAATCCATGACTGGGAGCTTCGGCACGTCGACATTGAACAAGC
GTACCTGCAGGCGCCCATTGACCAGGATATTTTCGTCGAAATTCCCGTAT
AA
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