mRNA_H-paniculata_contig55318.13015.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A2N9H4X0_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H4X0_FAGSY) HSP 1 Score: 112 bits (280), Expect = 2.460e-24 Identity = 80/289 (27.68%), Postives = 134/289 (46.37%), Query Frame = 1
Query: 1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKH-KMAPRGEKCIMLGISHN---------HPSGTVRVLNVKTGQVVQRQSVS-------WHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPV-------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
TPYE W G +LEHL+P+G++G++H K+ K+ PR K I + S HP+G + + + ++ S L E EG ++ G GLV R D Q S R + E+ G + + EP + E SP+ + W + +M + +N VW VD P + + + + K DG +++Y+ RLVA Q + I +++ SP AS +++LS+ A HD EL +D++ A+L +D++I++ P
Sbjct: 438 TPYELWKGEKPNLEHLRPWGSIGFVHSTAHKYGKLGPRARKHIFIRYSDRLKGYVMYGEHPNGGMTEIESRDIDFIETDFPSIGDANRDLDLYELEEDEGTLPSSSEGGGLVPRPYQD----SQARRVSNRGHIPRRH---FEIEGNVLLCDAKDVDEPASFSEALHSPDRDEWMTVMQEEMSSMDKNNVWELVDLPPGRKTIGNKCVLKVKRKADGSIDRYKARLVAKCYIQREGIDYEDTFSPVVRFASIRLILSIVAKHDLELFQMDVKTAFLNGELDEEIYMAQP 719
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A5N6PYG1_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PYG1_9ASTR) HSP 1 Score: 110 bits (276), Expect = 8.450e-24 Identity = 75/282 (26.60%), Postives = 132/282 (46.81%), Query Frame = 1
Query: 1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHN-------HPSGTVRVLNVKTGQVVQRQSVSWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELP----------VEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
TPYE WYG +L +L+ +G Y+ K T +K+ PRGEK I +G HP+ +V + ++ +S ++ N + + G +R + T + T +R E EP N + + E + W +A +V+MQ + +N VW VD P N V + I+++K DG V ++ RLVA G Q + I ++E SP S ++++++AA HD+E+ +D++ A+L +++D+++ P
Sbjct: 664 TPYELWYGRKPNLSYLRVWGCEAYV-KRETSNKLDPRGEKVIFVGYPKETKAYYFYHPTDK-KVFIARRAIFLEEDFLSKGMDG-NNVDLDEIQDSHNAGPEVRTIDQQITVEPEPCLVQAPIVTHDVRRSERIRREPERFDDIYLVDQSEPTNYKSASSDKESDKWLKAMDVEMQSMYDNQVWDLVDLPSNSKAVGSKWIFKKKTDMDGNVHTFKARLVAKGFTQTQGIDYEETFSPVAMTKSIRILIAIAAYHDYEIWQMDVKTAFLNGHLNEDVYMVQP 942
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A5N6N120_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6N120_9ASTR) HSP 1 Score: 110 bits (275), Expect = 1.110e-23 Identity = 76/265 (28.68%), Postives = 132/265 (49.81%), Query Frame = 1
Query: 1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQVVQRQSVSWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPVEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
TPYE WYG +L +L+ +G Y+ K T +K+ P+GEK G+ N NV +V +V +E+ + Q +T E P LV + + + + RR + ++ EP N + + E + W +A +V+MQ + +N VW VD P N V + I+++K DG V ++ RLVA G Q + I +E SP S ++++++AA HD+E+ +D++ A+L +++D+++ P
Sbjct: 399 TPYELWYGRKPNLSYLRVWGCEAYV-KRETSNKLDPKGEK----GMDGN---------NVDLDEVQDSLNVGPEVETIDQQ----ITVEPEPCLVQAPIVTHDVRRSERI---RREPERFD----DIYLVDQSEPTNYKSATSDIESDKWLKAMDVEMQSMYDNQVWDLVDLPPNSKAVGSKWIFKKKTDMDGNVHTFKARLVAKGFTQTQEIDNEETFSPVAMTKSIRILIAIAAYHDYEIWQMDVKTAFLNGHLNEDVYMVQP 638
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A401GTF6_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GTF6_9APHY) HSP 1 Score: 107 bits (268), Expect = 1.000e-22 Identity = 57/177 (32.20%), Postives = 98/177 (55.37%), Query Frame = 1
Query: 304 YFTGQQPSVFSTRRSGTSANNGDSELRGELPV-------------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
Y G QP + T ++ DSE + P+ EP + E SP+W WQ+A E +MQ L ++ + V+ P+N +V + I+ K+ +G++E Y+ RLVA G Q+ + F + +P +AS +++L+LAA HDW++ +D++ AYL A +++DIF++ P
Sbjct: 883 YPKGLQPGDLMGATAMTVEDSEDSESEEDEPIFAMPAAFAVHEGQEPRSLEEAMQSPDWPQWQQAIEKEMQNLRDHHTYDLVEPPENTNIVGSKFIFRIKHNANGEIESYKARLVAQGFTQVPGVDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNAELEEDIFMKQP 1059
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A8J5Z9A0_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Z9A0_9ROSI) HSP 1 Score: 107 bits (267), Expect = 1.260e-22 Identity = 70/265 (26.42%), Postives = 123/265 (46.42%), Query Frame = 1
Query: 1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQVVQRQSVSWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPVEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
TPYE W G + S+ ++ +G Y+ K T K+ P+ E+CI +G + + ++ Q + + P+ E ET P R L + ++ T + D EP +E ASP+ E W A +M + EN VWT +D P+ + ++++K DG V+ Y +LVA RQI + + E SP S +++L++AA HD+E+ +D++ A+L +++D+++ P
Sbjct: 436 TPYEMWTGKSPSMSFMKIWGYEAYV-KRQTSTKLEPKSERCIFVGKGSGRK---IELEEIRESQDATEPEIKQQ-QIPQEIEEEVTVVETQP--PRRSLRERHAPERYGFLITTHGDILLIDQD---------EPRTYQEAVASPDSEKWLEAMRSEMDSMYENQVWTLIDPPEGVKPIGCKWVFKKKTDMDGNVQTYNGQLVAKVFRQIHGVDYDETFSPVAMFKSIRILLAIAAFHDYEIWQMDVKTAFLNGKLEEDVYMTQP 684
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 106 bits (264), Expect = 3.420e-22 Identity = 58/177 (32.77%), Postives = 96/177 (54.24%), Query Frame = 1
Query: 304 YFTGQQPSVFSTRRSGTSANNGDSELRGELPV-------------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
Y G QP + A +SE G+ P+ EP + E SP+W WQ+A E +M+ L ++ + V+ P+N VV + ++ K +GK+E Y+ RLVA G QI I F + +P +AS +++L+LAA HDW++ +D++ AYL A ++++IF++ P
Sbjct: 915 YPQGLQPGDLMGA-AAVEAEESESEQEGDEPIFAMPAAFAVREGQEPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQP 1090
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 105 bits (263), Expect = 4.630e-22 Identity = 55/191 (28.80%), Postives = 107/191 (56.02%), Query Frame = 1
Query: 223 LESPENQEGGGLTAETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPVEPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
LE E++EGGG T G++ + TG P + + +A GD P + + + + W++A E +++ + GV+ +V RP+++ ++ + +++ K G DG+VEKY+ RLVA G Q++ I + E +P S +++L+LAA HDWE+ +D++ A+L ++++I++++P
Sbjct: 949 LEGEESEEGGGDVGSTDTGIMEKS----DTGVTPVTTTADEAANAAVLGD----------PLSYVDAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVP 1125
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A2Z6MHE6_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MHE6_TRISU) HSP 1 Score: 105 bits (261), Expect = 8.110e-22 Identity = 81/288 (28.12%), Postives = 135/288 (46.88%), Query Frame = 1
Query: 1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKH-KMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQVVQRQSV------SWHLESPENQEGGGLTAETGPGLVLRQLTDYFTGQ-QPSVFSTRRSGTSANNGDSELRGELPV---------------EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
TP E W GN S++HL+ FG++ Y H K K+ + EK +++G P+G ++ + K+ +VV + V W+ + +N L E P V + TG Q STR S D E + V EP N E A P+W + E + + +N W V+ P +K +S +++ K DG + K++ RLVA G Q + I F E +P M + ++V+++A+ DW L H+D++ A+L P+ ++++V P
Sbjct: 463 TPEEMWTGNKPSVKHLRIFGSLCYRHIPDEKRRKLDDKSEKLVLIGYD---PTGAYKMYDPKSQKVVISRDVVVDEKSQWNWNASKNIVQMQLDDE--PHTVDNRNDIQDTGDTQEGRRSTRTRFPSVRLNDHETITDDAVNDDGDLVHLAFMADSEPINWNEAVACPKWNQAMKDE---LLSIEKNHTWKLVELPPHKKAISVKWVFKLKKNPDGSIVKHKARLVARGFLQQQGIDFTEFYAPVARMETIRLVVAIASSFDWPLFHMDVKSAFLNGPLQEEVYVSQP 742
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A8J5YUK5_9ROSI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YUK5_9ROSI) HSP 1 Score: 104 bits (259), Expect = 1.470e-21 Identity = 79/286 (27.62%), Postives = 131/286 (45.80%), Query Frame = 1
Query: 1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHN-------HPSGTVRVLNVKTGQVVQRQSV-----SWHLESPENQEGGGLTA-----ETGPGLVLRQLTDYFTGQQPSVFSTRRSGTSANNGDSELRGELPV----EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
TPYE W S+ ++ +G Y+ K T K+ P+ E+CI G +P+ +VL +TG ++R+ V +E E QE T + P + Q+T T Q P + R G++ + EP +E A P+ E W A +M + EN VWT VD P+ + ++++K DG V+ Y+ RLV G RQI + + E SP +++L +AA HD+E+ +D++ A+L +++D+ + P
Sbjct: 376 TPYEMWTRKRPSMSFMKIWGYKAYV-KRQTFTKLEPKSERCIFAGYLKETKGYYFFNPTEN-KVLVARTGVFLEREFVFRKGSGRKIELEEIQESQDTTEPEIKQQQIPQEIEEQVTAVET-QPPRRYLRERHALERYGFLITTHGDILLIDQDEPRTYQEAVAIPDSEKWLEAMRTEMDSMYENQVWTLVDPPEGVKPIGCKWVFKKKTNMDGNVQTYKGRLVTKGFRQIHGVDYDETFSPVAMFKFIRILLDIAAFHDYEIWQMDVKTAFLNGKLEEDVCMTQP 658
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Match: A0A015J5I9_RHIIW (Gag-pol fusion protein n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015J5I9_RHIIW) HSP 1 Score: 104 bits (259), Expect = 1.530e-21 Identity = 75/292 (25.68%), Postives = 137/292 (46.92%), Query Frame = 1
Query: 1 TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNHPSGTVRVLNVKTGQ---VVQRQSVSWHLESPENQEGGGLT-----AETGPGLVLRQLTDYFTGQQPS-----VFSTRRSGTSA-----------NNGDSELRGELPV---EPNNRRETQASPEWEHWQRAEEVKMQGLIENGVWTQVDRPKNKLVVSTMMIYERKNGEDGKVEKYRCRLVAHGNRQIKSIHFQEASSPAPAMASTKMVLSLAAIHDWELRHVDIEQAYLQAPIDQDIFVEIP 795
TP+E W G SL H++ +G ++ + T+ K+A R E+C LG +P + L + + V R++V E ++ G E+ L + ++ + P RRSG + ++GD+ + + EP N +E A PE W+ A + +++ + +N VW VD + V I+++K DGKV ++ RLVA G Q + + E SP + S +++L++AA HD+E+ +D++ A+L + +D+++ P
Sbjct: 622 TPHEMWTGKVPSLAHIKVWGCEAFVRRE-TQDKLAERSERCFFLG----YPKQSFGYLFYRPSEDVVFVARRAVFRERELIFKEDSGSTIDLEEIQESSDDATLGETSNQHEEEVPVGPTDVSLPLRRSGRVSMPPEFYGFHITSDGDTFVSDRTLINLDEPANYQEAVAGPESAKWKEAMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAFLNGKLTEDVYMNQP 908 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55318.13015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig55318.13015.1 >prot_H-paniculata_contig55318.13015.1 ID=prot_H-paniculata_contig55318.13015.1|Name=mRNA_H-paniculata_contig55318.13015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=267bp TPYEKWYGNTASLEHLQPFGTVGYMHKIITKHKMAPRGEKCIMLGISHNHback to top mRNA from alignment at H-paniculata_contig55318:189..1106- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig55318.13015.1 ID=mRNA_H-paniculata_contig55318.13015.1|Name=mRNA_H-paniculata_contig55318.13015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=918bp|location=Sequence derived from alignment at H-paniculata_contig55318:189..1106- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig55318:189..1106- >mRNA_H-paniculata_contig55318.13015.1 ID=mRNA_H-paniculata_contig55318.13015.1|Name=mRNA_H-paniculata_contig55318.13015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1602bp|location=Sequence derived from alignment at H-paniculata_contig55318:189..1106- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |