prot_H-paniculata_contig5526.13004.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5526.13004.1
Unique Nameprot_H-paniculata_contig5526.13004.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length657
Homology
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BLAST of mRNA_H-paniculata_contig5526.13004.1 vs. uniprot
Match: D7G9B3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B3_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 3.220e-13
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:  162 RQSCDYCAKKKTKCSGEVGQCLRCRRDQVECIYSPKKKTGPVRRR 206
            R SCDYCAKKKTKCSG VG+CLRCRRD  EC+YSPKK+TGP +RR
Sbjct:  310 RLSCDYCAKKKTKCSGGVGRCLRCRRDDQECVYSPKKRTGPPKRR 354
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BLAST of mRNA_H-paniculata_contig5526.13004.1 vs. uniprot
Match: A0A6H5KXH0_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXH0_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 7.810e-11
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0 
Query:  162 RQSCDYCAKKKTKCSGEVGQCLRCRRDQVECIYSPKKKTGPVRRR 206
            R SCDYCAKKKTKCSG V +CLRCRRD  EC+YSP  +TGP +RR
Sbjct:  589 RLSCDYCAKKKTKCSGGVWRCLRCRRDDQECVYSPNTRTGPPKRR 633
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BLAST of mRNA_H-paniculata_contig5526.13004.1 vs. uniprot
Match: W6ZRT9_COCMI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Bipolaris oryzae ATCC 44560 TaxID=930090 RepID=W6ZRT9_COCMI)

HSP 1 Score: 59.3 bits (142), Expect = 1.180e-5
Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:  161 IRQSCDYCAKKKTKCSGEVGQCLRCRRDQVECIYSPKKKTGPVRRR 206
            +  +CD C  +K KCSG+  +CLRC+R+Q+ C+YSP+K+ G  R+R
Sbjct:   14 LHAACDECRTRKLKCSGDTPKCLRCKREQIGCVYSPQKQMGRPRKR 59
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BLAST of mRNA_H-paniculata_contig5526.13004.1 vs. uniprot
Match: A0A3M7M3R9_9PLEO (C6 finger domain n=1 Tax=Pyrenophora seminiperda CCB06 TaxID=1302712 RepID=A0A3M7M3R9_9PLEO)

HSP 1 Score: 58.5 bits (140), Expect = 2.050e-5
Identity = 22/48 (45.83%), Postives = 35/48 (72.92%), Query Frame = 0 
Query:  159 GSIRQSCDYCAKKKTKCSGEVGQCLRCRRDQVECIYSPKKKTGPVRRR 206
            G +  +CD C  +K KCSG V +C RC+R++++C+YSP+K+ G  R+R
Sbjct:   10 GRLHAACDECRTRKLKCSGGVPKCERCKREKIDCVYSPQKQMGRPRKR 57
[Close]
BLAST of mRNA_H-paniculata_contig5526.13004.1 vs. uniprot
Match: A0A6A6V8Q8_9PLEO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6V8Q8_9PLEO)

HSP 1 Score: 56.6 bits (135), Expect = 7.970e-5
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:  161 IRQSCDYCAKKKTKCSGEVGQCLRCRRDQVECIYSPKKKTGPVRRR 206
            +  +CD C  +K KCSG+   C RCRR+Q++C+YSP+K+ G  ++R
Sbjct:   17 LHTACDECRTRKLKCSGDWPLCARCRREQIQCVYSPQKQMGRPKKR 62
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5526.13004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G9B3_ECTSI3.220e-1380.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5KXH0_9PHAE7.810e-1173.33Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
W6ZRT9_COCMI1.180e-547.83Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A3M7M3R9_9PLEO2.050e-545.83C6 finger domain n=1 Tax=Pyrenophora seminiperda C... [more]
A0A6A6V8Q8_9PLEO7.970e-545.65Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 159..203
e-value: 6.7E-8
score: 42.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 163..199
e-value: 5.0E-7
score: 29.7
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 164..192
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 164..194
score: 9.259
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 159..212
e-value: 1.2E-8
score: 36.7
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 160..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5526contigH-paniculata_contig5526:3252..9658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5526.13004.1mRNA_H-paniculata_contig5526.13004.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5526 3252..9658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5526.13004.1 ID=prot_H-paniculata_contig5526.13004.1|Name=mRNA_H-paniculata_contig5526.13004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=657bp
MDRGGSQAGLPTMGVGDGGGPVGVGGGSRYTRWRGDGGSRPHSPMVDRGG
LHGHPHHNRGRSRSHSGSDDLRAMGGAAPTLHHTIGSSDHPSSTANTGNV
GRDYSAVASVSSRGSGRASAEDRPTAGGNASSSGGTTGEREKGDKEKVER
DKNGGEWWGSIRQSCDYCAKKKTKCSGEVGQCLRCRRDQVECIYSPKKKT
GPVRRRPLPTSAGAGGSGGGNSNANANSAAAATTTSTPPGGPKSSPGGAG
SESSPHAGTTGAGQAPGKRPVGDENKPSNGGSGGNSGPLAGSSADAQPAE
GQDLASREGTGEGYGGGGGGGGGGSGKKSSGSPTSEVHKGVGRAPGRHGG
GRIGKSGFVSGKESPPHGRGGGGSVGGEDGGGDGDDDRRGSSESDRGSSA
AAIGLSQASRSTSGVCSPPPQEVRERHSSSLNGSGGSSGDGGNDDSARSS
ASTMVQQHQHQQRQQRHCYSTASSKSGSNSVAGGAARVASGDDDGASSGG
RQDARGGSGGRSGKDAGVTNTHHGDHNAARGDGRGKGEAELEDDDSVGRE
PGKDDDNQSTSSSTTSASWSSRRRPSGLASPISGGGEDGESTPSAGQRTF
FEGRTPVGANDPQEGHGDQDEGAARAGGNSHRGVRNSQEGGGGDAGDGGR
GGRRVKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf